Array 1 81557-85546 **** Predicted by CRISPRDetect 2.4 *** >NZ_MSSW01000003.1 Algoriphagus antarcticus strain DSM 15986 contig3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 81557 46 100.0 30 .............................................. GGTCTTTGCTTCCAACATGTAAGCCTTTGC 81633 46 100.0 29 .............................................. AAGTCGCCGAAAGTTGGCCTAAAACTTTC 81708 46 100.0 30 .............................................. TGGATCCCTGCATCCTCACGATGGATATGG 81784 46 100.0 30 .............................................. CGGGTGGCTATTCACGATCAACCCTTCGAA 81860 46 100.0 29 .............................................. ATTCTACATGAACAAGACAATAGGAGAAG 81935 46 100.0 30 .............................................. TAAGGAGGGGAAACCAATTTGCCAAAGCCA 82011 46 100.0 29 .............................................. ACGCTATTTATTATCTGTTTTTTTTTTAT 82086 46 100.0 30 .............................................. ACCTTCTTTGACAGCTAGGCGCATACGTGA 82162 46 100.0 30 .............................................. TACTGATGTCTACGAAGATGATCAAACAGC 82238 46 100.0 30 .............................................. GGATCGGATCTTGAGCTTTACAGAATGCCA 82314 46 100.0 30 .............................................. TGTACTTAAGAACATTGTCTCCACGAATAT 82390 46 100.0 30 .............................................. AAAGGCGAACTTCAACCCCTAAAACAAAGG 82466 46 100.0 30 .............................................. TCTTCAATTCGGCATTTACGAGAACATGGG 82542 46 100.0 30 .............................................. AATGATCCGTACCGAGGCAAATCTAGGGGC 82618 46 100.0 30 .............................................. CCTGGTCAAGCGTTGGAATATTCTTTGTTG 82694 46 100.0 30 .............................................. TAAGGACAAAACGGTTTTCATTTTATGAAA 82770 46 100.0 30 .............................................. GGTTGAAAAGACACACTCCATTTTTTAAAA 82846 46 100.0 30 .............................................. TCTATCAACTAAAGATCTGGATGGAAGATA 82922 46 100.0 29 .............................................. CCTGCCATGATTGAAAATACTTCTGTTCA 82997 46 100.0 30 .............................................. TGGTTTGGCTTCTCGGTCGCTCTGTCGCTG 83073 46 100.0 30 .............................................. TAGAGAATGAAGGGGCTAAAGGATTCATTA 83149 46 100.0 30 .............................................. ACCTTAAACCACACGCTGAAAAGGATTTCT 83225 46 100.0 30 .............................................. AAGATTCGGTTGATTATGAAAGCAGTCAGG 83301 46 100.0 30 .............................................. CCTTACTACAATAACAACCGCAGGGGCGAT 83377 46 100.0 30 .............................................. GAACGGTCTTACAGGCCATTTCATCCGTGA 83453 46 100.0 29 .............................................. CATTGGACAATTCCTTTGCGTATTTAATG 83528 46 100.0 30 .............................................. TTACCGTGTTGCCTGAATCCTGCTGAAGCT 83604 46 100.0 30 .............................................. TGAGGCGACCAAAGTGCCAGCAACTGCAAA 83680 46 100.0 29 .............................................. GATAACTCATTGATGCAGAGCAGGCCGTT 83755 46 100.0 30 .............................................. GCAATTTTATTTTCATCTTTCAAGAACCCT 83831 46 100.0 30 .............................................. AAGAAAGACCCACAAGATTTGGGCAGAGTA 83907 46 100.0 30 .............................................. ATATAAACGTGTTAGGTGCAATGCCAGCGG 83983 46 100.0 30 .............................................. AGCTGTCTATTCTTTCCAACACCGTTATTT 84059 46 100.0 30 .............................................. TACAGATGTGCGCTCAGCACCTTCCATAAA 84135 46 100.0 30 .............................................. GTAAAGACCCTATTCCTAGTAAGTCGTTCC 84211 46 100.0 30 .............................................. ACGGAACACACCTCGATGCATCAGCCATGC 84287 46 100.0 30 .............................................. GGATAAAAACTTTAAATACTTCTTGAGATT 84363 46 100.0 30 .............................................. AACAATAATGTTCTATAACACCCCATAGAA 84439 46 100.0 30 .............................................. AAGGTGCTCGCGCGGATGCAATAGGTCAGC 84515 46 100.0 30 .............................................. GAGATGTGCAGCAGTCCGGAGAAGCGCAGC 84591 46 100.0 30 .............................................. TATGAATATGTACGTACGTTCTACCATGTT 84667 46 100.0 30 .............................................. TGATATAACCTTTTTCCTTCAATCGCTTCA 84743 46 100.0 30 .............................................. CACTTTTTTACAGTTCTTTTTTTGCTTTTT 84819 46 100.0 30 .............................................. GCGTGCTGGTGTCTATCGTGGTTCAAGTGG 84895 46 100.0 30 .............................................. CGAAAGTTTTGACGCGATCCATCTGATAGT 84971 46 100.0 30 .............................................. GGCTTCTTATTCAATACCGATAATCCAAAC 85047 46 100.0 30 .............................................. TTTGACTGCCAAGCTGGGAACGGATAGTAC 85123 46 100.0 30 .............................................. CTGCCTCTTCTATTGCTTATCCCCTATTTG 85199 46 100.0 30 .............................................. ATACTAGTATTATTGGGTAAAGATTCTTTA 85275 46 100.0 29 .............................................. CTGTGGTAGTAGAATGTTTTGGTTTAACA 85350 46 100.0 30 .............................................. TAGCGACAGGAAAGTATGAAAGTTATTTTC 85426 46 100.0 29 .............................................. ATAGAACATTCGAATCGTTTTGCGTACCT 85501 46 95.7 0 .............T..........T..................... | ========== ====== ====== ====== ============================================== ============================== ================== 53 46 99.9 30 GCTGTGATTTCCACTGGAAAGATACATTTTGAAAGCAATTCACAAC # Left flank : GGAATATGCATGAGAATTATTATTCAAGGCTTAATCAATATCGAAGTTTGTGGGTCTTAGTATTTTTTGATCTGCCCACCGAGACGAAAAAAGATAGAAAAATCGCTTCATCTTTTCGTAAGAAATTACTTGATGATGGATTTGCAATGTTTCAGTTTTCGATCTATATGCGATTCTGTGCCAGTCGAGAAAATGCCGAAGTGCATACACGCAGGGTAAGGATAAATCTCCCACCAAAGGGGAAGGTGGGTATTATGCAGATTACAGATCGACAGTTTGGGATGATGGAATTATTTCATGGGAAAACTATTGCAGAGAAGGAACAACCCGTTCAGCAGTTAGAACTTTTTTAGATTGTCTGTAAACTTTTCTAATCCACCTCGGAGGATTGGAAAAGATAATGCCGGGTTAGCACAGGTATAGAGCACCAAAAGACCCAATTTTTATTTTCCTAAAAACGAGCATAAAAAACAGCATACCAGCCACTTAGCGTGGGGTAT # Right flank : CTGCTCGCCATTATTTTATTGAAAAGATCTGAATTTTTAAAACCAATTTTTTACTATCTTCAGTTTCTAATCCATTAAAAATGAAACTCTTGGCTATGACATTACAGCAACTAATCAGACCCCTTTTCAAATTCCTACTTTTTAATTTTGTTACATTTTTCACGCTATCTGCCAACGCCCAATTTCAAATTGTAGGGATGCAATTTAATGGGAATTCTGCAGATGCTGTCAATTTAACAATCATTGCCCCAAACGGAACGCCATTTACGGGCATTGTTCCTTATGATCAAAGTAAACCTTACAATTCAGGAACAACATTCAAAACTCCAGCTAACACGTCAATCGCTATTCTTTATAAAGGGCAGACGCAAATCATGGACCCCAATTCTGTGCTAAAAGTAAGTATCGTCAAAAACGGTGTGGTGGCGCAGACGTTGACGGGCCGGGTGAAGCACGTGCTTAAGGATGTCAAGTCAAAACTTGGTTTTTATAAAGCGGGC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGTGATTTCCACTGGAAAGATACATTTTGAAAGCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.04%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.40,-2.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 2 88926-90033 **** Predicted by CRISPRDetect 2.4 *** >NZ_MSSW01000003.1 Algoriphagus antarcticus strain DSM 15986 contig3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 88926 46 100.0 29 .............................................. CTTATACTCTGTATTAATTCGGTTATGCT 89001 46 100.0 30 .............................................. GTTGCCCGTGAAAGTGAAGACCTGTGCGGT 89077 46 100.0 30 .............................................. TTTGGTTACATACATAGAGTTAATCACATC 89153 46 100.0 30 .............................................. CGGTATCTGTTTTATTGATCTTTTTAGTTA 89229 46 100.0 30 .............................................. TGGAAGCCTTCGCTTGATAGGGCTGGGAAT 89305 46 100.0 30 .............................................. CCTGGGGGAAATGACAGCTTTGACGGATTG 89381 46 100.0 30 .............................................. TATTTACAGAACGATTTAAACATAACCCCT 89457 46 100.0 30 .............................................. TTGGATAGGTTGATTCGGAAAGGCTTAAGT 89533 46 100.0 30 .............................................. CGTTCTCTATTTCCTTAAGGCGCCGGGTTA 89609 46 100.0 30 .............................................. GATTTAACAATCCAGCCGCAAAAAGAGCAT 89685 46 100.0 30 .............................................. CCAATAGGGAAACGTCTCCACATCCTCCAT 89761 46 100.0 30 .............................................. TACTGTATCTTTGCAATCTTTTTTGGTGTC 89837 46 100.0 30 .............................................. TCCTGCCGAGTGGATGTGGACTCCCTTCTG 89913 46 100.0 29 .............................................. ACCATAGCACGCGCGACACGCGCGCGCTA 89988 46 95.7 0 T............................................T | ========== ====== ====== ====== ============================================== ============================== ================== 15 46 99.7 30 GCTGTGATTTCCACTGGAAAGATACATTTTGAAAGCAATTCACAAC # Left flank : CTGGCAATCATTTATAATAGTCTAGTAATAATACTTTTTCTTGCAGTAAGGATATTACAAAACCCTATTTTTTTCAATTCCCAAGTGTTTTATTGTGAAAGACTGGAAGATTTTTATGCCAATGTATTCCAAAAAAAAAACCGCCATTGAAAGACGGTTTTTGTACACAAAATATTTTTTAACCTATAATAAAGATACCACCTATGGCAAGTACCTCATCCATTGTTAATGGTTCGTCAAACGCTTCTGTAAGCGCATCGTCTCCTCCAAAATTAGCAAACATTCCTGCTAAATTAACGCCACCCTGAACTTTGTCTGATTCAGGCGTTGCGCCTCCATAAACAGCTGCAAATGCTGCTGGTAATGTGTTTTCAGATTGCGTAATCCACCCTTTTTCATCACGCATCCGTCTTACCTGAGCCGCATGTCTCGCTTCTACAGAATGAATTTGCAAAGCATACTGCAATAAGGCATTGTCATTGGCTAAAGCACCAGCTTGT # Right flank : TTGACTAGACCTGACTAGTTTGTTTCGTACCTACCAAAGACTCCACGATTTCCTTCAATCGCACCTTATCGGAATTGAAACCAAGGAACGCTATGATAGACTACACTGAGAAAGGGACTTTCTTTCTTAGCCTCCGAAATTACCTAGCATACCAACATCAACCATGTGATTATCAAATATCTGTTCGGATCGCAAGCCTAACTGGGAATGGGGCGAAATAGGATTAGCTGGTTAGGGATGGGTTCGCTTCTGATATTTTCCCAACCAATACAAGCCTGTTCCAATCCCAATCAAAACCGCAGTGAGCCAAATGGAGGTCCAACTCACCTGAAGCATCAGCCAAAGGCAAGCTGAAATCCCCAGTATTGGAATGAGGTAGCCGCCTTTGAGTATGAAGTAGCCCTGGTCACGAAATCTTGGTCTCAGAACCGGAATCGCTGCACAGGTCATAATAAAAAGAAATAATCGGGACAATACTGTCATGGCGGCCAAGAAGGTAA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGTGATTTCCACTGGAAAGATACATTTTGAAAGCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.04%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.40,-2.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //