Array 1 19571-14418 **** Predicted by CRISPRDetect 2.4 *** >NZ_AQUO01000002.1 Paracoccus sp. N5 ParN5DRAFT_contig2.2_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 19570 29 100.0 32 ............................. CCGCTCTGCGCTGTGGTCTACGAGACCCGCGA 19509 29 100.0 32 ............................. CCTGCCTGACCTTTCGTTCGGCCTTCTGCCGG 19448 29 100.0 32 ............................. CCCGCTGGGCTTCGCGGCGCTTTACCAGCAGA 19387 29 100.0 32 ............................. CCGCGGCGCTGGCCGGTGTCCGGGCCTTCGGC 19326 29 100.0 32 ............................. CGGGCGCTTAGGGCGTTCATGGCCCGGCGGAG 19265 29 100.0 32 ............................. GGCGACGGGCTCTATCACGTCGCTTGCCCGCC 19204 29 100.0 32 ............................. AACACGACCGATGTGACCGTTCCCGACTGTGA 19143 29 100.0 32 ............................. GCGCTGAGCGCGGCCAGCCTATCGGCTCGCCC 19082 29 100.0 32 ............................. ACCCTTCGCAGCCCTGCCGACGAAGACGACGA 19021 29 100.0 32 ............................. AACCCCCTCGGCGGCGTCATAGACCCCGCCAA 18960 29 100.0 32 ............................. CCCAATGTCCCGAGCCAGCAGGTCCAGGCCAC 18899 29 100.0 32 ............................. GTTTACGCGGTTGACAAAGCGGCGCTGCCGGT 18838 29 100.0 32 ............................. GGGCTGACAAAACTGCCTTTTAGCACGTTGTA 18777 29 100.0 32 ............................. CGATCCGCGACGACACCGCGCAGGCCATTGAC 18716 29 100.0 32 ............................. TAGTTGTATTTGTAGCGGTGCACACGCCCGTC 18655 29 100.0 32 ............................. CCGAAGGGGGCCGGGGAAACGTGGCTGCAAAA 18594 29 100.0 32 ............................. CTGTCAGCCAATTTTGACGACCTGCAATCCTA 18533 29 100.0 32 ............................. GTTGCGGCCGTAAACGCGGATGCGCGGGGCGT 18472 29 100.0 32 ............................. AATTTGGTCAGGATTGCTTGCGTCATGGTATC 18411 29 100.0 32 ............................. CCAATGGGTCCTGGGCGACTGCTGGGCTGGCA 18350 29 100.0 32 ............................. ACGAGATGGAGGTTACCAATAACGCGACGGCA 18289 29 100.0 32 ............................. GCATCTTCCGGCCAGATCTCTACTTCCTTGGG 18228 29 100.0 32 ............................. TATTATATATTGTGCAGAATTGTGGGCGCATG 18167 29 100.0 32 ............................. TCCACAGCATCGACGCCGACCACGCCCGGCGC 18106 29 100.0 32 ............................. GTCGGGCGCACCGAAGGTGTTGGCACAAAGAC 18045 29 100.0 32 ............................. GGACTGCCGCCTGTTCGCTTCAGCGCGACTGC 17984 29 100.0 32 ............................. CCATTCTCGCGGCTGGCGTCGAACCGATGAGC 17923 29 100.0 32 ............................. GATGGCATGTTGCCCATGGAGCATTTCGGGGT 17862 29 100.0 32 ............................. AACGACATGCAGGGCGTTGGCTCGGCTATCAC 17801 29 100.0 32 ............................. GTGCCGCTGACCGAGAACCAGTTCGGAGCGTT 17740 29 100.0 32 ............................. ATCGTTCTCGCGATGCTGGCGGCGATTGGCGT 17679 29 100.0 32 ............................. TGGTCAAAGGCGGGCTTGGGTATACCGCCAGC 17618 29 100.0 32 ............................. GGCGGCGCATCTACACCATGCGCGAGGTGGCC 17557 29 100.0 32 ............................. GCGCGCAGAGGGACGCTGACGCGGGTGGATTG 17496 29 100.0 32 ............................. GACTGGGCCCCAACCCGCGCCTATGAGGCGCT 17435 29 100.0 32 ............................. TTTTCCGGTTTTGTCATCGGCGCGGTATGCCT 17374 29 100.0 32 ............................. GTCGAGGCTTGCTCAGGCGGCTTCCATGCCTG 17313 29 100.0 32 ............................. GATACTGGCTACCCGCCGCATGGTTCGCCAAG 17252 29 100.0 32 ............................. CGGGCTGTGAAACTCGGGGAGGCGGCGATCAA 17191 29 100.0 32 ............................. GATGGGCTGAATGCCATGTCTGAGGCTCAGGC 17130 29 100.0 32 ............................. ATTTGACTGGCCTTTGATCGGGTCACTCATCG 17069 29 100.0 32 ............................. CGCCTCGCGCAGGTCGGCTTTCGTCGGGTTGT 17008 29 100.0 32 ............................. GGCGGCTTTGGCGTCGGCGGGGGTTAGAGCAC 16947 29 100.0 32 ............................. GTCGGGCCGGCAATGGGCGCCAATGCGTTGGC 16886 29 100.0 32 ............................. GCCGCGAAGGTGGCGGCGGCGGCTAAAGCGCA 16825 29 100.0 32 ............................. TCCAGGGCGACAGCATGATGCCGGCCTATCAG 16764 29 100.0 32 ............................. CGGTCGTTCTGTTCGTGGCTGCGCTTCGCCTC 16703 29 100.0 32 ............................. CGGGCCATGTCCTCGCCAGACGGGCACGTAGA 16642 29 100.0 32 ............................. CGGCCGGCGATACCAGCGGTCCGTTCGTCATC 16581 29 100.0 32 ............................. GCACAGGGGAGGTAGGTATCGTTCACGATGTC 16520 29 100.0 32 ............................. TCATATGTTCCGATTTCATTTCTTCGAGAATG 16459 29 96.6 32 ............................T TCGGACGTGGTGCTGATGTGCCGCGCCAGCCG 16398 29 100.0 32 ............................. AATTCGGGCTGGACGGCGTCTTCGAGGTCACG 16337 29 100.0 32 ............................. CAGCTTGCCGCCCTCGACACGAACGTCTTCCC 16276 29 100.0 32 ............................. GAAAGCCTCGATCTCTTGCAGGAATGTGGGGG 16215 29 100.0 32 ............................. GGTACGCCATCGGTCAGGTTCGCGGGCCAATC 16154 29 100.0 32 ............................. GCAGATTTTGCCTCTGGCAAATTTTGCCCAAG 16093 28 96.6 32 ....................-........ GCCGACGGGATCGTCGGCCCCGCTACCTGGTC 16033 29 100.0 32 ............................. ACCAGCGCCATGTCCCCTATGAGGCGTTGAGG 15972 29 100.0 32 ............................. CACCCTGGCCGGCAACGAAGAAGCCCTTGGCA 15911 29 100.0 32 ............................. AACACGCAAGATGTCACGGTCCCGGACTGCTC 15850 29 100.0 32 ............................. CCATGGGCGTCGGCGAGGCAGAGCTGGACGGG 15789 29 100.0 32 ............................. TGGAAGCTCACGGCGGCGTCGAACTCGTGCTG 15728 29 100.0 32 ............................. CCCGGCGTGCCAGCGTCGCCAATCTCGCCCAG 15667 29 100.0 33 ............................. TGCATCCAGGTCGAGGACTGGCCGGTCAGCTAC 15605 29 100.0 32 ............................. GCGTTGCCGACGCCAGCAGCGCCAGCCGCCGC 15544 29 100.0 32 ............................. GCGCTGGAAAAGGGCCTGTCCAAGACCCATGC 15483 29 96.6 32 ..............T.............. CCGAGGGCAGGCGCAAGCATGCCGTGGTCTGC 15422 29 100.0 32 ............................. AACCCCGGGTGCTGCTGGTTGACGCCGAACCG 15361 29 100.0 32 ............................. GGCGGCGGGGAGGCGGTCGCGGCCGAGAAGGA 15300 29 100.0 32 ............................. CGCGACAGCCGGTCGATCTGAATGTCGATGGC 15239 29 100.0 32 ............................. ACCATCAACGCCGCGAAGGCGAAGGCCACCGA 15178 29 100.0 32 ............................. GGGCGCGCATGGAAGAGCACCCTGCGAAAGTG 15117 29 100.0 32 ............................. CTGCGAATACCGGTGATCGCATCGGCAAACCG 15056 29 100.0 32 ............................. ATGCCTGCGATCATGGGCGGCGCAGGCGAGCC 14995 29 100.0 32 ............................. ATGGTGGACGACGAGCAGATCTTGATCCCGGT 14934 29 100.0 32 ............................. CGCTCCATTTCCTGCTTAAACTCTGCTGACCC 14873 29 100.0 32 ............................. GCGGCACGGCGTTCGATCGCATCGTCTATGCC 14812 29 100.0 32 ............................. GAGACGGTGTTGCCGAGGTAGCGTTCACCGTC 14751 29 100.0 32 ............................. ATCTGAACGGGTTCAGCGTCCCTGGCGCGCTG 14690 29 96.6 32 ............................C ATCGCGCGTCCTCCATATGCTCGGCCATGTGC 14629 29 100.0 32 ............................. AGCAGGTGGACGCCGCGATTGCCGCTGCCGAG 14568 29 96.6 32 ............................T CATTGGATCCTCCTTCCGCCGCTCAGCCGACC 14507 29 96.6 32 ..A.......................... GGGGCGATTGCACTGCAGACCGCGCTGGGCGC 14446 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 85 29 99.8 32 CTGTTCCCCGCACGCGCGGGGATGAACCG # Left flank : TTTTGGCGAAGATCATCCCCGGGATCGAGGAGGTGCTGGCGGCGGGCGAGCTGCCGCGGCCCGAGCCGCCGCCGGATGCGATCGGCCCGGCTTTTGATGACGGCGCCGGTTCGGGGGACGAAGGGCATCGCGGATGATGGTCGTCGTCCTGAACAATGCACCACCCCGCCTGCGCGGCCGCCTTGCCGCCTGGCTGCTGGAGGTGAGGGCGGGAGTGTATGTCGGCGACTATTCCGCCAAGACCCGGGCCCGGATCTGGGAGCAGGTCGAAGCCTATATCGAGGGCGGAGATGCGGTGATGATCTGGAAGGCGCCCACGGATCAGGGATTCGAGTTTCTGACCGTCGGCCGCAACCGCCGGATGCCGGTCGATTTCGACGGATTGAAGCTGGTTTCGTTCTATCCACGCGAATAGCCGGTTGCTGCGCCAGAGCGGGGCAACAATCGGTGCCCCGATTGACATCGTGAATATCATTGCGGCACAAAGACTTCCAGGAAGT # Right flank : CTCTGTCGAGCCGACGCCAGCGCAGGGCCGTCCCAATCGAAGATGCTGCCGACCGGGGGCAGTCCAGCGGCAAAGGCTTGGTGCCATGCCATTCGGAGCGGCTGCCCGCAGGCCGAAGCTGGGGTCATGGCTGCGCCCGGCTGGACCCCTATCCCGGTCAGCGGGTCGGGCAGGCTGCAAGTACAGAACAGCTGCGAATCGTAATGGCCGATGCTGCGCGACAGATTGACCTGCGCCGTCCCGCCATCGCCGAAGTCATGTTTGATGCGCAAGCAGCCGGTGGTCATGTCGGACTCCGCGCGTCCAGTCCAGCCCCGTCGCGAAGCCGCGCTGGAAATGTGTCGGCCTCCCGTCCGAGAAGACCAGCGGCCAGTTGGCCCAGGTCGTCCCGGTCCGCGCGTGCTTGCGATATTCGACGCCGGCGATCACTGTGGTGTCCTCGGTAGGTCCGCGTCGATGGTGGCGAGATAAGTCTGGGTCTTGCGATGATAGCGGTCAAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCACGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGCCCGCGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //