Array 1 57573-55610 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADILI010000048.1 Streptomyces albidoflavus strain ANT_B131 Contig_22, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================================== ================== 57572 37 100.0 36 ..................................... CGCGCCCGTGCTCCCGAGCGTGAGCGCGGAACGGTG 57499 37 100.0 37 ..................................... CCGAGGACCCGGCCGCCCGCTGGTGGGCGGACCTTGC 57425 37 100.0 35 ..................................... GACTCCACCAAAGAAGCCCTGTCCGCCGCGGACGA 57353 37 100.0 36 ..................................... GAGGAGACCGTCCTCTTCGCCGTCGCCGGTGACCCG 57280 37 100.0 35 ..................................... CTCCTCCTCGGCGCCGGCGCGGCGTTGGCCGTGGC 57208 37 100.0 37 ..................................... CCCCCACCCCGAAGCAGCCGAAGCGGACCCTCAACCG 57134 37 100.0 36 ..................................... ACCATGGGGTTGCTCCTTGTGAAGGGGGCACTTGAT 57061 37 100.0 36 ..................................... GACCTCGCGGTCGACGCCTCGGAGATCGACTTCCTC 56988 37 100.0 36 ..................................... ACCATGGGGTTGCTCCTTGTGAAGGGGGCACTTGAT 56915 37 100.0 36 ..................................... GACCTCGCGGTCGACGCCTCGGAGATCGACTTCCTC 56842 37 100.0 37 ..................................... GCCGCTGGCCGTTGAGGACGCGCACGACAGCGAGGCG 56768 37 100.0 38 ..................................... TGGCTGAACACCTGCCCCAGCCCCGGGGGCGCGTCCTG 56693 37 100.0 37 ..................................... CCCTACCACTGAAGCCGCAGTCGACTCCCCCATGCGC 56619 37 100.0 37 ..................................... CTTGGCGCAGGCCGAGAATGCCAGCGGCGTGCGCATC 56545 37 100.0 35 ..................................... ACGGTCGGTCCTTTCGGGGCCGGGCCGGGCGGACG 56473 37 100.0 36 ..................................... ACCGTCGACCAGGTCGCCCGCGACGCACAGCAGGAC 56400 37 100.0 36 ..................................... GTCGGGTACGGCGGAGGCAATGAGGCCGCCGGCGAC 56327 37 100.0 36 ..................................... CAGCTCTACCCGCAGCACCAGGCGGTGTGGGACACC 56254 37 94.6 37 ............T.....................T.. CCCTGCACGTCCCCCGAAGACTGGCAGCGCGGCCCGC 56180 37 100.0 36 ..................................... CCCACCCCTGTGAGGGCCGCTGCTGGAAGAGGCCGA 56107 37 97.3 37 ...A................................. TCCATCAAGGCGGGCAGCTCGCCGTCCTGGGCCGCGA 56033 37 100.0 36 ..................................... AACCTGATGTTCCCGGCCGGCGCGCTGCAGCGGGTG G [56013] 55959 37 97.3 36 ............T........................ GTCGGCGCCGCCGGTGAGGGTCGCCAGCGCGCTGCT 55886 37 94.6 36 ..............T..............G....... CGCGCGGTCGAGCTGCCGGGCAGCGGCACGGAGGGG 55813 37 94.6 39 ..............T.......A.............. ATCGGCAGCGTGACCAGCGGAGAACTACGCGAGCCGGGT 55737 37 97.3 54 .............................G....... GCTTCGGCGGGGCCGGGAACTTCGTCGGACAGGGCAGCTCCCTGCGCCTGCCGG 55646 37 81.1 0 A.........T.......A..AA.T...........A | ========== ====== ====== ====== ===================================== ====================================================== ================== 27 37 98.4 37 GTGGCGGTCGCCCTCCGGGGCGGCCGAGGATCGCAAC # Left flank : CGCCACCCGGGCCGTCAGCACCGTCCCCGCCTCCTTGTGCGGCACCCCCACCCGGCCACCCGACCCCTCAACCACCCCCAACCGCTCCTGCCAGGCACAACACCCCTTGCCCACGTCATGCACCAACCCCAGAAACTCCGCCGCCTCCCCAGCCCCGAACACCTCACCGAACCCCCGCGCCAAAGCAGCCGAACCCCGCAGGTGATCCACCAGCAGATGCCGCACACCCCACGGATTCCGGCTGTGCGCGAACAACTCACGACCCGACATCCCGGCCCCCTCACCGATCGACCACCCACCGAACGCAGCCACCGTAAAGTGGACCACCGACACCACAACCCAGACCACCCCGAAGCGACCAGCCAGACCGCCTTCGGAACCTGAAGCACACACACGACACGCCAATCACACCCAAGGAAAATGTCAGATTTGCTCGAAATCGGGCCTCGCTTAACTGCTGGCCGAGAGCACGCAGACAGACAAACCCCTGACCAACCAGG # Right flank : GGCTGAGCTTCACGGCCTTTCAGCACCTCGCACAACCCTTAGAATCTCACACTATGTGACGCTATAGACACTCAAAGCAGCGGGTGCCGACGGGCCGCCCGTACCTTCTGCGGGAGGTCTATGACAAAACCCCCAGCATCGACGACCGAATCTGCGCTCTCCCCGACCCCGCCGACCCCACCGAGTACGAGGCCATCGCGGACGCCCTGTGGGACCTGTTCCTGTCCACGAGGAATCTGGCGGAGCAGCGCAGCGGCACCGGTTGCACGCGTCATCCCGATGGGCCTGTCGACACCGAAGCCCCGGAGGACTGGGGGTTCTGCTTGCTCTGCAACACCAACCGGCGTCGGGGACAGCCCAGTTCGACCGCGGCGGAGAAGCCGCCCAAGCACGTCTGGGCCGTTCCGCCCCCTCCCTACACCCACGGGGCGCTTCTCCAGACGCGCCGAGCGCTGAACGACGCGCTCCTCGAACTCAACTACCGGGCCCCGGACGCTTCC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGGTCGCCCTCCGGGGCGGCCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGCGGTCGCCCTCCGGGGTGGCCGAGGATCGCAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.70,-18.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [17-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 63901-64553 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADILI010000048.1 Streptomyces albidoflavus strain ANT_B131 Contig_22, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================================================ ================== 63901 37 100.0 64 ..................................... ACTTTCCGTGGGGGTGGTGCGGTCACCGGCCCCGGGTGTGGCGGTTGAGCTGGTAGGTGCCCGA 64002 37 97.3 37 ..............T...................... GACGTGACGGTGATCGACGCCTCGCGGACGATGAGCC 64076 37 100.0 36 ..................................... ACCGCCGACGACGGGGCAGCCTCCGTCGCCGTCCTC 64149 37 100.0 36 ..................................... ACGTCCCCCGCGCAGATCCGGGCCTACTGCAACACC 64222 37 100.0 37 ..................................... GCCAGGGCCAGGGCGTCGATCCCGGCGCGCTGCCGGT 64296 37 97.3 35 ..........................G.......... GTCGACGACTGCGTCGGCTACGAGCAGCTGGTGGA 64368 37 100.0 36 ..................................... ACCGGCATCGCCCAGGAGGCGAGGAGCGCCGGTGTC 64441 37 97.3 39 ...............T..................... CTCGCTCACGTAGATCCGGTCGATCCGCGAGTCCGGGCC 64517 37 94.6 0 ..............TT..................... | ========== ====== ====== ====== ===================================== ================================================================ ================== 9 37 98.5 40 GTGGCGGTCGCCCTCCGGGGCGGCCGAGGATCGCAAC # Left flank : GGCGTGGCGCGAGCGCAGCGAAGCCGACGACAGCGACGCCAAGGGCAAAGAGACCGAGATGGGCTCCAAGTACGTCGTCCCCTACGCCCTCTACCGCGGCACCGGACACTTCAGCGCCCCCCTCGCCCACCGCACCGGCGTCACCAGCGACGACCTCGCCCTCTTCTGGCGCGCCTTCGAGATCATGCTCGAACACGACCGCGCAGCCGCCCGCGCCAACCTCGCCCTGCGCGGCCTGTACGTCTTCACCCACGACGACGCCTTCGGCCGCGCCCCCTCCCACGAACTCTTCGACCGCATCACCGTCAAAGCCCGCGGCGACGCCAACGCCCGAACCTTCACCGACTACGGAACCGTTGAAATCCGCGACACCGACCTCCCGCCCGGCATCACCCTGACCACCCTCCTCCCGCGCACCACCGGATGACAACCCCACATACCAGCCCAGGCGGAGAGCGCGAACCCACCCAGATCATGCTCTCCGCCCGACACCCCCGGCA # Right flank : CCGGACCCACTCGGGGTCGAGGCCGCCGAACTCATTGGGTGGCGGTCGCCCTCCGGGGGCGAGGACGGCGTCACCCAGAAATCGATCGCCGAAGCCCTCGACCTCCATCGCGGCAGCCTGAACCACAAGATCCGGACCTACCGACAGACGGGTCGCTGGGTCGGTGTGCGTCAGCAGCGGGGGAGTATCTCCGAAGCCGACGCCGAGCTGCTGTGCAGCCTGCCCGCCCCACGGCAGGGGGAGAAGGTGCTGGAGCTCTTGGAAGAGGCGACCTCCGGTGCCATCGTGAAGGGCCTCGGGACCACGGCGAACGGCCTCAAGACAAGCGTCGCGGAGTACCGGGACACGGGTCGGTGGACTCCCCCCAGGCGCATGATCTCGAAGGCCGAGGCCCTGCGCCTGCGGGGAACTCCGGTGCCCCAGCAGGGCGGGCAGATTGAAAAGCTGCTCGCCGCCAACGTCAAGCTGATTTCCATCGCCCACGCCCTCGACCTGCGTCC # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.22, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGGTCGCCCTCCGGGGCGGCCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGCGGTCGCCCTCCGGGGTGGCCGAGGATCGCAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-18.40,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-23.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //