Array 1 55-2406 **** Predicted by CRISPRDetect 2.4 *** >NZ_WIQP01000059.1 Pectinatus frisingensis strain MB273 PFRH_41.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 55 33 100.0 35 ................................. AATGAAAAACTGCTGCGAACGGTAACGATAAACAA 123 33 100.0 35 ................................. TACCATAGCAGAAGAATCAAATGATCCATCAATAT 191 33 100.0 36 ................................. GTATAGTAGGGCCATTTAATAGGCCGGTTACACCAG 260 33 100.0 34 ................................. ATACTATAGGGTGGGCCATAATTTATCACGTTTA 327 33 100.0 36 ................................. GTATTCGAATTTTAAAAAATAGGTTTACCGGAGAAA 396 33 100.0 34 ................................. TGTTTGTGTCGTTGTTAAGTTTTTTAAGTCATGC 463 33 100.0 35 ................................. TGCCCATGCGGGGGGCTGATTGATATCACCCTCCC 531 33 100.0 37 ................................. TTTATCGAAACAATCCTGCACGTATTTAGCAACCCTT 601 33 100.0 35 ................................. TATGTCCCCAGGCAATAACTTTTCAAAGCTGTAAC 669 33 100.0 35 ................................. TAAAGATTTTTTTATTGTTTACCCACCGCTGCAGA 737 33 100.0 36 ................................. AGGAACAACATTGATGAACTATCTAAGAAACTAAAC 806 33 100.0 36 ................................. TTCTAACATCAGTGTAAAAGTACAAATTAGAAAAGC 875 33 100.0 35 ................................. TTATACTGTAGCGGCAACGGATACTTTTAGTTTAT 943 33 100.0 35 ................................. TACAGTGGGGAATGAGCACTACCGATTCAAATGGA 1011 33 100.0 35 ................................. CGTAATATCTCGCCTTAATTGCTTAATATCAGTAT 1079 33 100.0 36 ................................. TGGCTTAATGGAACTGATATTCACAGTGAATTTGAA 1148 33 100.0 35 ................................. CATTTGATATTCGGTTGACAAAATCATGCTAAACA 1216 33 100.0 35 ................................. TAAACAATCGCAAACATCTTTAGCAATAAACCAAA 1284 33 100.0 35 ................................. GGATAAGGCATTTATTTTTGCATCGTGCAGCAGAA 1352 33 100.0 35 ................................. AAATTCCGGTTTTGCCGGAGCATCAAAAAGTTCTT 1420 33 100.0 35 ................................. AACCGATGCAACATTTTTATTGCCGCCATATGCTT 1488 33 100.0 36 ................................. CGAATGAAAATACTTTCAATACTCCTACTGTATTAA 1557 33 100.0 35 ................................. TTTAAAATTGGGTATTAAAAAAGCACCCCGATGGA 1625 33 100.0 38 ................................. ACTTCATCAAGGGCGCCGATAGCTGCACCGTGGTTGCC 1696 33 100.0 35 ................................. GGGTACCGATTTTGGTGTAAATCCGGCCGGATTTT 1764 33 100.0 35 ................................. ATTCAAGGATGGATTCTAATGATATTAAAGACCAA 1832 33 100.0 34 ................................. TGCTATCGTACCCCCACGGTTGGTATTCCGTGGA 1899 33 100.0 34 ................................. CAGCCTGTGCGTGATATTTTTTTACCTAATTTTA 1966 33 100.0 36 ................................. TTTTCTTCGGGTCGCATTTACCACTGTCTAAGAGGC 2035 33 100.0 35 ................................. AATCGCCCGGTAACACCGGATGAATACGAGGCTGT 2103 33 100.0 35 ................................. CCAAAAATACAGATTTAACAGCACACATTAGTGCT 2171 33 100.0 35 ................................. TTATTACTTCAAAGAGGTTTGTCACATTGCTATCA 2239 33 100.0 34 ................................. GTTATCGCATTGCAATAAATGACAACGGACATCG 2306 33 97.0 36 ................................T CTTTGCTTCCATTTTGATTACCTCTTTTTAGTTTAT 2375 32 84.8 0 ...........T............-....G.CT | ========== ====== ====== ====== ================================= ====================================== ================== 35 33 99.5 35 GTCGCTCTCCGCATGGAGAGCGTGAATTGAAGC # Left flank : GGAGAGCGTGAATTGAAGCAAGTTTGCAGAAGGGCGAGACGGGAAAATACAGCCG # Right flank : CTCTCGTAAAATAGCCATATTCAATGCTTAGGTTGCTAATTTTGTTGTTGGTCGATTTCCAATACTCAGCCTACCAGTTTCCTTCTTGCAAAATCTAATGCCGTTACCAAATAACACCATTTGTTGCCAACTTTAATATAAGTAAGCTCTGCAAGCCATATGGTATTAAAATCGATCACATCAAATTTGGGGTTTAGAAGATTGGAAAACACTTGTTCTGGATTTTTTTTGTATAAAAGAAAAGGGGCTGTGACAAAATGAGAAATCATTTTGTCCACAGCCTCTTTTTCTATACAAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCTCCGCATGGAGAGCGTGAATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCTCCTCACGGAGAGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-6.40,-6.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //