Array 1 97041-97798 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP022881.1 Staphylococcus sp. M0911 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================= ================== 97041 33 100.0 33 ................................. AACAACTGCACGTTGTAATACAAGCCTTCTTCT 97107 33 100.0 33 ................................. AACATATTTGCTATAGATAGAAGATGCACCTTG 97173 33 100.0 33 ................................. AACAAATAAAAGGTGAATTTAAAGGTGCTGAGT 97239 33 100.0 33 ................................. AACGACAAGTGGACCAATCAATAACGGTACTGG 97305 33 100.0 32 ................................. AACCGTGGCGCTTGCTAGGTAACCGTATCTTA 97370 33 100.0 33 ................................. AACGTGGTAATCCTACCGCTACAGTGCATTTAT 97436 33 100.0 33 ................................. AACTAAAGTAATGTGACTGCTCTTTTTTACTAA 97502 33 100.0 33 ................................. AACCAGATAATTATTCTAATGCGGCTGTTATTG 97568 33 100.0 33 ................................. AACTTAACTTCTAGTATATTCAATCCAGTATCT 97634 33 100.0 33 ................................. AACTCACTCCTTTCTGCAATAATGGGTGGGGTT 97700 33 100.0 33 ................................. AACGGTGTTTTTAACAAGTCTAATCCCGTATGC 97766 32 78.8 0 ...........T........G.-A.....AA.T | T [97792] ========== ====== ====== ====== ================================= ================================= ================== 12 33 98.2 33 GTTTTAGTACTCTGTAATTTTAGGTATGAGTGA # Left flank : AAGGGTTATATACAGACTTTGTCATCGTTAATCAACAAGGTCATCGTGTTCGACCAGGGCAAGGCTATGTACATCATGTAGCAGTCAATCTTCCTACAGATACAGACTTAAATGACATTTATGAAAAAATAGCACGACAACCCAACCCTAACTCCGGCATTATCGATCGATACTTCTTTAAATCATTATACTATCGACATAACCAAATACTATTTGAATTTGCGACAGCAGAGCCAGGATTTACCGTTGATACACCCGTCGATAAACTAGGTCAACAACTCAACCTCCCCGATTTTCTAGAGGACAAAAGAGACGAGATTGAAAGCCAATTGAGAGAAATATAGAGGACAATGTTAAAGCACTCGCTATTACGGCGCGTGCTTATTTGTGGTTATAAAAGTAGATTTTTATTTGTTTAAGATATATATTTAGATTATCAAGTAGATAATACGAAAAATGGATTACTAAAATTTTTAGTAGTAGAGTTTTATATGCTAGAG # Right flank : TATAATATTTTAGTTGCAATGCTATTGAATAACAATTATAATTTAATTACAGAGAACAAGTTTAGCTAACTTGTACTCATACCTAAAATTACAGAATCTACTGAAACAAGACTATATGTCGTGTTTATCCCACTAATTTATTAGTGGGATTTTTTGTGTTTTAGTACAACTTCTGTAGAAAAAATATAAAAAGTAGTGCCACGTTTATTGGTTTTAAATTATAATAAAATAAAACAAATAAGGTGGGTGTAAACTATGAAAGAAAAATATATTTTGGGTTTAGATTTAGGTATTACATCAGTAGGATATGGAATTATTAATTTTGAAACTAAAAAGATTATAGATGCAGGCGTTAGGCTTTTTCCAGAAGCAAACATAGATAATAATGAAGGTCGTAGAAGTAAAAGAGGATCTAGACGATTAAAAAGGAGAAGAATACATAGATTAGATCGAGTGAAATCATTACTCACAGAATATAACTTAATAAATAGAGAACAAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACTCTGTAATTTTAGGTATGAGTGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTAGTACTCTGTAATTTTAGGTATGAGGTA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.10,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 2 103476-103839 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP022881.1 Staphylococcus sp. M0911 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================= ================== 103476 33 100.0 33 ................................. AACGAGATTTTAAAGTTTTATAGCCTTCGTTGA 103542 33 100.0 33 ................................. AACGTTTCACATCATCTATCCATTCCAGACAGA 103608 33 100.0 32 ................................. AACGACGTCGAATTGTTCTGTGTACGCTGCGA 103673 33 100.0 33 ................................. AACTAACATCTCATTCTGTTCCAGGTACTTATA 103739 33 100.0 33 ................................. AAACGTTACTGAACGTGGAATCGACTTCGAGGA 103805 33 100.0 0 ................................. | A,A [103833,103837] ========== ====== ====== ====== ================================= ================================= ================== 6 33 100.0 33 GTTTTAGTACTCTGTAATTTTAGGTATGAGTGA # Left flank : ACAATACGGTGGCAAGTTGCTATTAATATATTTGTATCCTGAAGCAAATTTAAGTCCAAAAGAACAAATACGTTTGAAAGAGTTAATAATATCACTTGGAATTGATATTATAGTATTAACAGGGTCATTGCATTTTTTAGCTAAGGATTGGAAGTATAATAACTATATTAGATGTGATAATCAAAAAATATCATCTGAATTGGTAGATAATCTACTTTGGAATGCCCCATTAAATTTTGAAAGAAGTGAAATAGAGCAGAGTTTAAATCAATTTATATTAGCTTACCAAGATAAAATCGAAATAAAACCGATTATCTCTAATTATCAAATTGCTCAAATTATGTTATTTAGTTCAATTGATTTATATGTAGGAGTTTCATATATGCAACATTGCAATCATGAATTTATATTGAATATAGATGAGACGAAATTACCCTTAAGTATGGCTAAATATTTAGAACAGTTTGTTAAAGAAAATTAACTATAATTTTGCGCTAGAG # Right flank : ATTGGAGGATATTTATGAGTAGCATGAGGAAGCCGATTATAAAAAATATTAGTTATTCTAATGAAGAGCTAGTTAATTCATTAGGCGAGTGGCAACAGAGTGATGATTCCAAATTTTTACTCAGATATCCCACCGTCTATATTATAAATGATAAAAATAAGTCTGATCATTTTAATTTGTATGTTGGTGAAACAACGGATATCAAAAATAGAACAATTCAACATTTGAAAAATGATGTGAAGCTTAAAGACTATTGGAAATCATTTTACAGTTCTGATACGTCTTCGATGTATGTCATCGGACATCCGTTCTTTAATAAGTCTTTAACTTTAGATATAGAAAACAAGTTTATGCAATATTTGTCTAGTGTAGATGCTGTGACTTCAATATTTAATAGTAGAACAAATCAGCAAAATGAATATTATACTTCTGAAAAATTAGATGAAATATTCACAAATATTTGGCAACAATTACATAAAGAGAATAGTAAACTTTTTCCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACTCTGTAATTTTAGGTATGAGTGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTTTAGTACTCTGTAATTTTAGGTATGAGGTA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.10,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //