Array 1 2627396-2637968 **** Predicted by CRISPRDetect 2.4 *** >NC_018227.2 Methanoculleus bourgensis MS2 chromosome I, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 2627396 36 100.0 41 .................................... CTGGAGTTCCTCGCGACCGCTCCCCCGGGCGACATCCTGAT 2627473 36 100.0 37 .................................... ATTCTCTGTAAGATGCTGTGTAATCTCGTAAAGAATC 2627546 36 100.0 37 .................................... AAACCGTTCCCTATCTTTGACTCTGATAACTATGTAA 2627619 36 100.0 37 .................................... CAAAGCGAGCGATGCTAACACCGGGGGTCGGGAATAT 2627692 36 100.0 41 .................................... TATTGTAACAAGCCTTATGTGGAGTAGTGCATGTGATACTC 2627769 36 100.0 36 .................................... CAGGGATGGTTGCTACACGCGCTACATCTCCCATAA 2627841 36 100.0 38 .................................... TTTCATTCTTTGCATCAAGAACTGTTACATAACAACCG 2627915 36 100.0 38 .................................... TATTGCAGTGAGTATGCTTTGCTGCCCATTCGTCACCA 2627989 36 100.0 37 .................................... TCGTTGAGGGCGTCCCGCTCCCGGGGCATCCGAGTAT 2628062 36 100.0 35 .................................... CTTTTGACATCTGGATCATGGCAGCGTATGACTGT 2628133 36 100.0 39 .................................... TCTTACAACACGCATCTCGGATGGTTCTGCCGCAAAAAT 2628208 36 100.0 36 .................................... GTGAACGGACGAGGGGTGCACCGGGTCGGGGACGCA 2628280 36 100.0 38 .................................... CGCTCGGCAATCACTTCGTCGAGGCGGCGTTTCGGGAC 2628354 36 100.0 37 .................................... GCATTATAAAACGGTGAAACGCTGATATGCCTTGAAT 2628427 36 100.0 38 .................................... CAGTTTCCAGCACCATCAGACTGTAACCCTACACCGAT 2628501 36 100.0 35 .................................... GCAAGTGGATTGGAAACATCCATAGAGGTATACAA 2628572 36 100.0 36 .................................... CTCGCATGATGATATGATTGCCTACACTGAATTTGG 2628644 36 100.0 36 .................................... GGCACCTGTTGCCCCAGGACCGGCACCTGCCCCTCA 2628716 36 100.0 38 .................................... GCTAATGAAAGGTTTTATTTCGGTTCTCATCCAGATTG 2628790 36 100.0 37 .................................... CGGTGATATTTCAATGGTAGAGGCACAGGAAATCATG 2628863 36 100.0 38 .................................... TTATCCATTAAATTTGATTACATATGCAGCACTTATTC 2628937 36 100.0 35 .................................... AGATATCAGTCTGTGCTCCGCCCAGAACGATTTGA 2629008 36 100.0 39 .................................... CCTCAATGATTTTTAATTCCAACACAATCATTTGTTGAG 2629083 36 100.0 38 .................................... ACATCGCCGCCAAGAACATCCTTACACTGTTGGAAAAT 2629157 36 100.0 37 .................................... GCGATAGGTCCCGGTCTTGTACGGGGTTCTGCCGCCT 2629230 36 100.0 37 .................................... TTTTCGGATTCTTCTTTAACTCTTCAATCTCATCTTC 2629303 36 100.0 37 .................................... CAAACGTCATACACATAACCGCAAATGACCAGGAAGA 2629376 36 100.0 39 .................................... TTCTGTAACCCTTCGAGCACCACTAACCTATCTGCCTCA 2629451 36 100.0 37 .................................... GTTTTAACCTTGAAAATTGTTAATGGATTAGCATTAA 2629524 36 100.0 39 .................................... ATCGAGTATAACATCAAAGATGTCTACCTTATGGTGAAG 2629599 36 100.0 37 .................................... CGTGGAAATATACTTCTGATAAATATATAGTTGAGGT 2629672 36 100.0 39 .................................... CAAACGTGCGACGTCGCCGGGTCCCTCTCCACCTCCGCC 2629747 36 100.0 36 .................................... AATGATAACGGGAAAGTGTTGCACCTGTCTGATTCT 2629819 36 100.0 37 .................................... CGGCAGGTCTCATCCCGCTCCCACCGCGAGCCGGACC 2629892 36 100.0 36 .................................... AATTATCCACTCATAATTATGCGTGAGATAATCCTC 2629964 36 100.0 38 .................................... TTGCCTATGTCGTACCTATCTGTATTCTGTAGGTAGGT 2630038 36 100.0 37 .................................... AATCCGTCTGATGAGTGGAAACAATGTGTTAAGGAAG 2630111 36 100.0 38 .................................... AGGATATCCTCATTCGTCCCGGTCCATTCCGTTGCCCC 2630185 36 100.0 38 .................................... AAGTCTCCCACACCATGAACAACTCTATCCCACACGAT 2630259 36 100.0 36 .................................... CGGGCGCACCGGGCCGTCTTCATGCGCGAGTTCGAG 2630331 36 100.0 36 .................................... CCGGTATCCTCGATAGATGCGAATGTCGAGATATGG 2630403 36 100.0 37 .................................... ACCGGCCCTGAAGGCGATACTGTGTCGTATGTTTAAT 2630476 36 100.0 38 .................................... CCGTCATACGGGCGAGGATGTCGGCCGGGAGATGGATC 2630550 36 100.0 39 .................................... GCCGCGGAGATCGAGGCGGAGATCAAGAGCCGGGCTCCG 2630625 36 100.0 38 .................................... GGGTTCCGGCCGGCGCTGATCAGGGCATATTTGGTGCT 2630699 36 100.0 37 .................................... AACACCGCGTTCGGCGTGGACTGGGTGGCCATCGCCC 2630772 36 100.0 38 .................................... GTATTTTTAATGTCTTCATCCTCGCATCCTCCCTGCCA 2630846 36 100.0 37 .................................... CGTCGATGTAGAAAGTGATTGTTGACCCGGATCTGAC 2630919 36 100.0 37 .................................... ATGCGGACTCCCCCCGGCGGTCTCTCGATCACGAGAC 2630992 36 100.0 36 .................................... CTTCTATAATTATCCAAATAGGATAAGTTTTAGTCC 2631064 36 100.0 38 .................................... GTTCTAAGGGTAACATGATTACTTCTACTGATAACCGT 2631138 36 100.0 38 .................................... CCCGGCCCGGCGGAAACGTGCCGCCAGTGCTTCGGGAG 2631212 36 100.0 36 .................................... GGCCCGCCGCAGTACTGCTGGAGCACGACCGACGGG 2631284 36 100.0 37 .................................... ACACGGGGCAGGTGGCATGTCGTCGTGATGGCAGATG 2631357 36 100.0 36 .................................... CCGAAACTCTCTTCTGCTGCCATTCGCATCTCCCGC 2631429 36 100.0 36 .................................... GAGTGAGTCGGTATCACAATAGACGGCGGTTTCAGC 2631501 36 100.0 38 .................................... ACCCAGCCTATCAGGTCGGGGTGCTGGAAATCCTCCCG 2631575 36 100.0 36 .................................... ATGTGGGTGTTCTTCCGGCTTGATGGTCGAATCCAG 2631647 36 100.0 38 .................................... CCGGCGTGTCGGTGCGCCATCTTGTACCGGCGCAAACC 2631721 36 100.0 36 .................................... AAGGGTTGTCGTCTCCCCGACTTCGGCCAACTTCTC 2631793 36 100.0 36 .................................... GACTCGCCCCACACGTAGTGGGAAAGCCCGATGTAC 2631865 36 100.0 36 .................................... TCTTTCCGCATCGCCCGGACCAGGCTGACCAGATCC 2631937 36 100.0 37 .................................... GGGGGCGATGCGGCATACGTGCAGGGGTTCCAGATGC 2632010 36 100.0 36 .................................... TGGTTCGGGCGCTTGATCTCCCGGCCCTTGAGCGGC 2632082 36 100.0 37 .................................... ACCCACGAAAACCCTTCGATACACCAAACTACCTCAA 2632155 36 100.0 37 .................................... AGGGGTATCCCGTAGATCTTGCCGTCCGGCCCAAGAA 2632228 36 100.0 36 .................................... AACAAAAACGCTTACTCACCTTCTCCGGTCCTGGAA 2632300 36 100.0 36 .................................... TGGAGCATGACGTAGGGCATCCGCTGCCATGCGTCC 2632372 36 100.0 36 .................................... CCCGAGGACGTCGAGGAGCATCCGGGTCAGGTGCTT 2632444 36 100.0 35 .................................... GTCGGACATGATGCAACTCACCCCCACACCCCCGC 2632515 36 100.0 37 .................................... CATTGCGGGTCATGTCGAGGCCGAACGGGATTTCGAC 2632588 36 100.0 38 .................................... TACCCCACCGGGATTCAGCCTTAGCCAAATCTGCAGCC 2632662 36 100.0 39 .................................... CGCTCCCCCGGGCGCATGGCCGTTATCGACGACTGGCAC 2632737 36 100.0 36 .................................... CGGGCCGTGGACTGCATCGTCCCGCCCGACTCGGCA 2632809 36 100.0 40 .................................... TACTTGGGGGGAGGCGACGATGAGTGATGATCTCATCCTC 2632885 36 100.0 38 .................................... TCGGCCGCGCATCGCACTTTCGCCCACGCAAACCGCCC 2632959 36 100.0 37 .................................... GGTCTGTAAGGGTTGCCCGGCGCGTATTGAGGGGCGT 2633032 36 100.0 36 .................................... CGAGGTCATCCTCGGGGCGACGCTACCGTTGGAAAA 2633104 36 100.0 37 .................................... TCGTCTGCGCTGCCTCTCGAGATTCGAGACTTGCAGG 2633177 36 100.0 37 .................................... AGTTATTCGACGGTCTGTACAGTTGGTAGACTGTAGT 2633250 36 100.0 38 .................................... TTGCATTTCCTTAAATTCATTAGTAGGAATATAACCGT 2633324 36 100.0 38 .................................... GACGGCATCGAGCTGAAAAACCCGGCCCCGTTCAACCT 2633398 36 100.0 36 .................................... AACCTGGAGGTGTCCGACCTCGCCCACGTCTCTGAC 2633470 36 100.0 39 .................................... TGCCATCGGTGATCGTCACCGCTGCGGAGGTGGTCGCGG 2633545 36 100.0 37 .................................... CGGTTCCGGCTCCGCGACACCTCTCCCTGGGCGCCGA 2633618 36 100.0 39 .................................... CGCGAGGTGCGACGGGTGCTCAGGGATGACGGCGTGCTC 2633693 36 100.0 40 .................................... AATAATCTGGATTTTTATCATAATCATCGAGACACCCCAT 2633769 36 100.0 37 .................................... CAGAAGGAGGTTATCAGGCTCAATGCAGAAGCATTCG 2633842 36 100.0 38 .................................... ACAAATCACAACGCGCGCTCGCTCGTAACGCTGAGTAT 2633916 36 100.0 37 .................................... CTTCTGTGCCGCACCGACCGCTTCTGGGTAGCGGACG 2633989 36 100.0 36 .................................... CAACGTAAAGCGCTGCCTCTCGCATCTTTTTCATCG 2634061 36 100.0 37 .................................... TGGTTCCCGTCGAGGAGGATAAATAGATAGTAGCCTC 2634134 36 100.0 37 .................................... GGTGATACCGGAGTCGTCGCACCTATCGATACCACCG 2634207 36 100.0 36 .................................... CCGTTTCCGCGCAAGGCGTGGTTGCCCCTATTGTGC 2634279 36 100.0 40 .................................... CGGAGAGTAAATCTGCAACTGTTTGGGCTTCTAGAAGCAC 2634355 36 100.0 38 .................................... TTAGCGGTAATACCTTTGGGCGCTTTTCCTGCCAGGTA 2634429 36 100.0 39 .................................... CAAGGAAAGTTTACGACGTGGCATACCCCAGAATACTTG 2634504 36 100.0 34 .................................... AAAGGGAGTGTTAAACTTATTGATAAGTTGGTCC 2634574 36 100.0 37 .................................... CGACCCCCATCTGCTTGTAGTTGGTCGGTACGATGAC 2634647 36 100.0 36 .................................... ATCACCGGTGGGAAAACCTCGCAAACGGACTCACAG 2634719 36 100.0 37 .................................... CTGGTGGACTTCGGCGAGACCCCCTCATCCCCGATGC 2634792 36 100.0 38 .................................... TACAGAATGCGATCAGGTCTCTCACGAACGGTAACTCT 2634866 36 100.0 36 .................................... CGGAGCGATTCATCGACACCGAACTCTTCCAGCAAC 2634938 36 100.0 36 .................................... GGGTTCGACGTATCGTAAGGTAGGATAAGCGTGGCA 2635010 36 100.0 38 .................................... CTCTCGAGCCGACAGAGCAACCGACTGGGTGGCCGAGC 2635084 36 100.0 39 .................................... GGATCTGGTGTCTTCATTGAAATTTCCTCCGTGCATCGT 2635159 36 100.0 38 .................................... AAACTATCTTCTATCGACGCTGAACGGTTTTTCCCCCA 2635233 36 100.0 37 .................................... TAGGGGGTTCGGTCGGCCACCCGGTCGGTTGCTCTGT 2635306 36 100.0 39 .................................... ATTGGCTATCTGGACGCAAAACGCGGGCGTCGGGTTATC 2635381 36 100.0 42 .................................... ACAGATACCGTATCGCACCTGCATTTTGAGCCGGTTTATCCA 2635459 36 100.0 38 .................................... AGCCGTCGAAAATCCTACTCCGAATGCCAGGCCAATGC 2635533 36 100.0 37 .................................... GTCGGTGGGCGCGGAGCGAAATGATATTTTGCGTGAG 2635606 36 100.0 41 .................................... CCCGCCGAGGATTGTGTCGATATCGATGCCTCGCAGGGCCG 2635683 36 100.0 37 .................................... GAGGTCGCCGCCCCCGGACCCGGCTCCCACCTGCTCC 2635756 36 100.0 36 .................................... ATGAGTAAGGCGATCGCCTGCAGGTCTCGAAACTCT 2635828 36 100.0 37 .................................... TTCCGAAGTTTTCGAGATTCATCTTCATTTCCTCCAG 2635901 36 100.0 37 .................................... TACTCCTCCTCGTAGTAGGGTTGTATATCGGTAATCG 2635974 36 100.0 36 .................................... ACGAGACGGACGACGAGAGCGACGATTTCGCGATCG 2636046 36 100.0 36 .................................... CTCGATGAGGACGAGCGGGAGAATGCGGACCTGCTC 2636118 36 100.0 37 .................................... CACCAGACCGAGCGGATCAAGGTCATCTACTCCGGCC 2636191 36 100.0 37 .................................... ATCCCAGGTCATGATGCGATCCTCTGGCGGCTGCTCG 2636264 36 100.0 35 .................................... GCGAGATACTCGGCCTCGCTCTTGACAGTGGCCTC 2636335 36 100.0 37 .................................... AGGAGTTTATCGACCGAGGCTATCTCGTGCCGCTCCT 2636408 36 100.0 36 .................................... CCGGGCTCGGCGCTCCTGGTCGGTCGGATAGGGGAT 2636480 36 100.0 38 .................................... CAGTAGTTGCGGATTTAGCGCTAATTGTCCCAGTTTGC 2636554 36 100.0 40 .................................... TCCTCGCGTATTACATACATAAGGGGGAGGGGGGGGACAT 2636630 36 100.0 37 .................................... TAGCCGAGGAGGAGGCCGACCGTCCAATCAGGATCTT 2636703 36 100.0 36 .................................... GCGAACCCGTCCGCTTCCCGTGCGGCTGCGCCCTGC 2636775 36 100.0 36 .................................... GGTGACCGGCAGATCGGCTGCGTCGCGGTACTCCCT 2636847 36 100.0 36 .................................... GACTGGAACAACAACCCCCCCCGGAGCGTCGCACAG 2636919 36 100.0 36 .................................... ACGACCTCGTAGCGGCCCCCGGAGGGATGGATGGAA 2636991 36 100.0 35 .................................... GACGCCTGATCATAGGCGGTCTTCGCTCCATCGGC 2637062 36 100.0 37 .................................... AGATGCAGAAACTGATGCAGCGATACGTCCCGGCCGG 2637135 36 100.0 38 .................................... CTGTATTGCCCGACTGGAGGCGATGGAGCGACGCGGAC 2637209 36 100.0 37 .................................... TTGGTCGCATTCGCTCTTCTCCCGACGGGGAGAACCT 2637282 36 100.0 38 .................................... ATCAGGCTGCCGAGTTCTCGCTCTATCGTCGGGGCGTC 2637356 36 100.0 36 .................................... GGTGACGACGGTCTGGGCCTGGAGCGCTTCGATGTT 2637428 36 100.0 36 .................................... ATATGTATGTGGCTCGGTATCCTTTGGGTCGACCGA 2637500 36 100.0 35 .................................... CTACTGCTCCTGATTGCGCCTAATCCGGATTACGC 2637571 36 100.0 39 .................................... ACCGGTGAGGTAGCCGCTTTCAGCGGTTACCAGGATATC 2637646 36 100.0 35 .................................... GCGACCGTGCCGGTCACGTGCCACCCGCTCCGGCG 2637717 36 100.0 36 .................................... AGGGAGAGTGCGATGATGCCTCGATCGGCCCACTCT 2637789 36 100.0 36 .................................... GCCCTGGTCCGATGCCCTATTATCCCGGCCCCGAAC 2637861 36 100.0 36 .................................... GTCATGATGGCAGGGGCCTCAAAGTATCCCTGCTCG 2637933 36 88.9 0 ............TTTC.................... | ========== ====== ====== ====== ==================================== ========================================== ================== 145 36 99.9 37 CTTACCATGTCTGAAAAGACATGGCTCCATTGAAGC # Left flank : ACCATGAAGGGTTATGGCGATCCTCTGCACTACTCGGTATTTCGCTGCCACTTATCTTCTAAGGGTAAGGTTGAACTGGTAGCTGCCTTGACCAATATTATTAAGCACGATGATGATCGGGTTATGATCATCCATCTGGGGCCACTGCGCGGGGAGGCTGACAGAAGGATCGAATATTTAGGGGTTCATCCGAAGGTGAACAATCAATCGGCCATTATACTCTGACCGTTGCGAGAGGTGAGGTGGTGGATACGTTCCCGGGACCCGCTCGAAATGGTGCTGAAGGTGGGTACCATGGAACGGTCCTGGTGGAAAATGCAAAGAGGATTAAGGATGGCAACAAAATTCCGGAGAATTGTCATTCTTTCGAAAAGAGATGTGGCATCAGGATACTGAGGATGAGATCATGTCTCACCTGACAGTATCAATAACCGGGGACGGTTACAACGTTTTTATGGCACCTTTTATCAGCCTTGAGTGTTCTCATATATAAGTGGGCC # Right flank : CATCGTCACCGCGATCGTGATGGCGATGGTGGCCATCTTACCATGTCTGAAGAAATCCTCAACCTGACGATTACCCCCGAACCGATAGCCTCCGGTGTTCCAGCGCAGGTATTCCCTCTCCCGGCGGGAAGGCGGCGACGGCGATAACACGCTCAACCCGGGCGAGGTTGTAGAACTGACCCTACCCTTCCGGCAGCCCATACCCGCGAATACCGACGTCTATGCTGATTTCAGGAGCCCCTGCCACCGAACACCGATCCTCTCGCTCCGTACGTCTGAGATGATAGAACTCTCCGGGCAGTTGACCGGGTTTACCGCCGCCCCCTTTGTCCCGCACTGGTGGGAAGATACTACAAGTCACATCCGCGATTCCACGGGTCACGCGGGAATGATCGAGGGGAACTATGCCGCAAGTCCCGGATAGTAGCCCAAAGAATACATCACCGCACCCACCCCCCCACCCCAAACCGACAAGGTTTTCACCCCGCCAGCGCAGACCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTACCATGTCTGAAAAGACATGGCTCCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.30,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //