Array 1 441571-446419 **** Predicted by CRISPRDetect 2.4 *** >NZ_SWWI01000001.1 Clostridium sporogenes strain IFR 18/001 contig00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 441571 29 100.0 37 ............................. ATATATTTAGAAACTAGGAATTACTTTAGAATTGCAT 441637 29 100.0 37 ............................. TTTCCCAGCTTCTAAATTACCTATATTTCCTTTACTT 441703 29 100.0 37 ............................. AGAAATGAAACTACTAAAAGGATTTTAAGAGAAAAAA 441769 29 100.0 37 ............................. AGGTTTAAAACTAGCTTTTCTTTATTTCCAATATAAA 441835 29 100.0 37 ............................. CTTTATTAAGAGGGCTGCCAATAACGTCTACCCAATT 441901 29 100.0 38 ............................. GGAGAAAAAACAATAAGAGAATGTTGGGCTCGTGTTAG 441968 29 100.0 38 ............................. TTAGCTAGTATCTTTTTATGGTTTAAATTACATATTGG 442035 29 100.0 39 ............................. AAAAGATTTTGATAAACTGGGCTCTGTAATAGTTCACTT 442103 29 100.0 37 ............................. TGTTCTCCAGCTCAACTCTAGCATTTTCAAATTCTTC 442169 29 100.0 37 ............................. CTCCATATAAACTAATTATAACTTTGTATCCATTCTC 442235 29 100.0 36 ............................. AAATATAATCGAAGAAAATAAATCCAAAATTTCTCC 442300 29 100.0 37 ............................. AAAACAGGTGAGGAGCATATGAGTTTTTACTCAACTC 442366 29 100.0 37 ............................. GAATTATTTATTAAAAAATCAATTCCATTAGGTACAC 442432 29 100.0 36 ............................. AGATAAAAAAGTTTTGTTAGGAAATGAATTAATAAC 442497 29 100.0 35 ............................. TAGCAATACCATATTTATAGGAAGTTGTAAAATGG 442561 29 100.0 36 ............................. TTGTATTGCCCCATCGATCTAAGAAAACAAGCATTT 442626 29 82.8 37 GA...G..G...A................ TTGTATTGCCCCATCCCCAACGTTCCATGAGTTTAGC GT [442636] 442694 29 100.0 35 ............................. CTGCTTGAGAATAACTTAATTCCTTTTCAATAAGG 442758 29 100.0 38 ............................. ATGAGTGACGAGGCTAAAACGCAAGATGATAAGGTAGA 442825 29 100.0 39 ............................. GCGGATGAATTTGCTAATAAAGCAATAGAAGATATGCAA 442893 29 100.0 35 ............................. ATAATTTGATTATGGTAATGCAATACCAAATACAT 442957 29 100.0 38 ............................. TTGAAATACTGTATTTCTCATAAGGTTCTGATCTTAGC 443024 29 100.0 36 ............................. ATTATAAAGAAAATTTATTTAGTGTATCTATTGAAG 443089 29 100.0 37 ............................. TAGATATATTCCCATTTACATAAAAAACAATTGCTGA 443155 29 100.0 38 ............................. TGGACAAGGTTTGGAGGGTCTTAAATCTAAGCAAGAAA 443222 29 100.0 37 ............................. TACAAACTTGTTAATGGTCCTGCTAACCCACTCGCTG 443288 29 100.0 36 ............................. CCATCAAACCAAAGCAATTCGGGACCTTCTTCCCCG 443353 29 100.0 37 ............................. GTAGAAGCAGGAGCTTAATGCTCTTGCTTATTTAAAT 443419 29 100.0 38 ............................. AGGGAAGGCATTCAAAGAAGTTGCAGATTCCTTAAACA 443486 29 100.0 37 ............................. TAATTTTTAAATCTGCTCCATGTATTTCTAATTTATT 443552 29 100.0 36 ............................. AAATTTACAGAGGAATACGAAGGACAAAAACGCTAA 443617 29 100.0 38 ............................. GCGGGACAACAATTAATTACAGATACAATTGCATATAT 443684 29 100.0 38 ............................. TACTACTTTATTAATACTCTAGTACAGTTTAGGTGTAG 443751 29 100.0 36 ............................. TTTTATGAGTATATAATGAGCTTAAAATACCTATAG 443816 29 100.0 37 ............................. CTATGAATCTAGTTGGCAAATCATTACAGGCTAATTT 443882 29 100.0 37 ............................. CTTTATGTCGGTGATAAACAGGCAGGAGGAAATGCTG 443948 29 100.0 36 ............................. ACAGTTCTTTCAATAGTTATTGTAAAAATTGAACCA 444013 29 100.0 37 ............................. TTAACTAGTGTAACCTGGATGAGAGATATAGTAGCTA 444079 29 100.0 35 ............................. TAGCTTTGTATCTTCCTTCTGTTATATCTTGTCCG 444143 29 100.0 37 ............................. TATACCAACTGCAAACAGTCAAGTTAATGCTATTTAT 444209 29 100.0 36 ............................. AATTTACAGCACATGCAACAGCAGTCGGAATATCTA 444274 29 100.0 36 ............................. ATACCCTTTATCTTCTTTAAATCCCAAACAGATTGA 444339 29 100.0 38 ............................. GCAGAATCAATTATGAGGAATACTGTAACAGCTAAATT 444406 29 100.0 37 ............................. GTTTCTGTTTTGTTCGGTGAAGATATGCAAAATAAAA 444472 29 100.0 38 ............................. ATTGATATAGATGCTGCAAATGCATATGATACTATAGT 444539 29 100.0 36 ............................. AATCATTTATACTCTTTTTTATACTTGGATTGCTCA 444604 29 100.0 38 ............................. TCTAGTACCAATAAAAAGTTTTTTACAACCTTTTTCTT 444671 29 100.0 38 ............................. ACAGTTATATTTATTAAAAATATAACTGTTGGTGTAAA 444738 29 100.0 37 ............................. TTACATATTAAGCGGTACAATGTTGACCCTAATACAC 444804 29 100.0 36 ............................. ATAGGATTCTAAGTATAAGACTAGGGTAAAACCTAG 444869 29 100.0 37 ............................. CTACTAGACAATTTTGGAGATCAACATTGGTGGCCAG 444935 29 100.0 37 ............................. ATCTCTTATTACCATCTAGCATACAATGATTGTTGAT 445001 29 100.0 37 ............................. AATAATGCAAACAGCGATACCCATAATCCATAATTTT 445067 29 100.0 38 ............................. CCTTGGAAACAATGTTACCATCTTCGTCATAAGTCATG 445134 29 100.0 37 ............................. TGGCAAAAAGTGAAACTATAAATATGAGTTATGATCC 445200 29 100.0 40 ............................. CCTTCAAATGTTAAATCATGTATTGATTTTATTTCTGGAA 445269 29 100.0 37 ............................. TCAACGCCAGTAACTTTAACAGTCCCAGAAGCATAAG 445335 29 100.0 37 ............................. TCAAATATTTTATTATTTTCTTGATATAAAACAATGA 445401 29 100.0 37 ............................. ATACAACCTGGGGATGAATGTTTAGTGGTTTTTTCTG 445467 29 100.0 36 ............................. TATTCAGTATTTATATAGACTTCTGCTCTTTCATAT 445532 29 100.0 37 ............................. CTTAATTTAACAACTACTATACCAAATGATGGTAAAC 445598 29 100.0 37 ............................. AAGAACATATTAGCTTCTTCTTTACGTCTTCTTGTTA 445664 29 100.0 39 ............................. GCATATCCAAATAAATACAGGTGGGCTAAGAGCCAGATT 445732 29 100.0 37 ............................. GCTTTTACTTCTAAGTCATAGTCGTAGTATTTTATAG 445798 29 100.0 37 ............................. AATCCTATACCATTACCAGCTTCAATTAAATTTTCGT 445864 29 100.0 37 ............................. GGAGATTAATAACAGCAATGATGGAGATATAATATAT 445930 29 100.0 37 ............................. GGTACTACTGGATACATAGAACAAGCTACAGACGGAA 445996 29 100.0 36 ............................. ACAGACTTGGACAGCTTAAAGAAGCAAATAAATTTC 446061 29 100.0 38 ............................. TTGAAAGTAAAGATTCAGCATTGTCCGAAGTTCTTAAA 446128 29 100.0 36 ............................. AGATGCTAATAATATCGATAGTGCAACGGAAAACAT 446193 29 100.0 37 ............................. GTATAAATTCCTGTAATAAAAAGAATGTAATTTCTTT 446259 29 96.6 37 T............................ ATAGGTATATATCTAGGTACTTTTATACCTATAGTGT 446325 29 89.7 37 .............A......G..A..... CATGTTTCATCTATCATTAAAGCATGCTAAACAATGG 446391 29 82.8 0 A..C.............A.GA........ | ========== ====== ====== ====== ============================= ======================================== ================== 74 29 99.4 37 CTTTTATATTAACTATGTGATATGTAAAT # Left flank : AGGTGATGATATATATAAACCATTAAAGGCTTGGTGGTGATAATTTATGTTTGTTATATTGACATATGATATAGAAGAAAAGAGAATTAATAGAGTTAGAAAAATGCTAAAAAAATACTTAGTTTGGACTCAAAATTCTGTGTTTGAGGGAGAAATAACAGAAGGAAAGCTACATAAATGCCTTTCTGATGTTAATAAATTAATTGACAAGAAGTTTGATTCAGTATATGTTTATAGAGTAAAAAATTCTAAAAATATAAAAAAGGATGTAGTTGGAATAGAAAAGAGTTTTGATGAATTATTTTTGTAATTAGTTTTGCATTAAACCTAAATTTAAATTAATTAAGGTTAAACTATTGAAATTACTAGCTTTCTTGACAATAAAAAATAAATACTAAAAACGCTACTGAAGGTTTACTGCAAAATGTGGAAAATATGATAGATTAAGCATTGCTATAAATACAGTAATGGCGGTGGTTACAGGCTTTTTGAATTTTAGG # Right flank : TCAATATGCTGTGAAGTCTTTTTCTGTTATACCAAGATTCTATATACTCAAATATTGAGAACCTAGCGGTATCAAAATCATAATATGTAGCTAAATTTACTTCTTCCTTCTTTAGTGAAGCGAGGAAGGGTTCAATGTAGGTATTATCATAAGGACAATTCTTACCGCTGAAAAGGTGAATTATATTAATTCCTTTAAATATGCTTAACTGTTATCAAGCTTAATTTAAGAGTTTTGGAAAGATTTATGCTAGATTGCTGTAAAATTAATAAAGGTAGAAAGAAGTCTGCCTTGATTTTATCTGCTTCTATAAGTTTGTATATTTATCCTATGAAGGATTTTAAAATTTATTATAGAATACTTAGTGTAGTTAATGAATGAAATTATACATAATCTAATAAATTTTTTCCTAAATAAAAAATAGTTATTTATTTAGGAAAATAAACAGGGGGTTATACTAATGAAGATAATAGTTATTGGACCTAGGGGAAAAATGGGGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTATATTAACTATGTGATATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.76%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [7-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //