Array 1 29409-28893 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_PXUP01000015.1 Faecalibacterium prausnitzii strain ATCC 27768 NODE_15_length_85674_cov_331.42, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     29408	    29	  96.6	    32	.............A...............	ATTCACGAGTATCATCGAATGATGGCAACGGC	
     29347	    29	  89.7	    32	A............A..............T	ATGTTATTGCGTGGATATACGCAACAACAAAT	
     29286	    29	 100.0	    32	.............................	TGCAACGCCAACTTCCGCGGCATGATGGACTA	
     29225	    29	  89.7	    32	.............A.......T......T	ATGCATATGGCTGACTGCAAGCGTCAGGTGGC	
     29164	    29	  89.7	    32	.C...........A..............T	CGCACCCAGATGGGGCACATACTCGCGGCAAT	
     29103	    29	 100.0	    32	.............................	GGCTTGCATCCGGTTGGCTACGGCGATAACCG	
     29042	    29	  93.1	    32	.............AT..............	TACGTGGTGCTGTACCAGATGCTCTGCCTTAT	
     28981	    29	  89.7	    32	........T....C..............T	AGACCCTCTTGATGTCTATTCCTCCTACGGAC	
     28920	    28	  79.3	     0	........T....C.......C.T.-..A	|                               	
==========	======	======	======	=============================	================================	==================
         9	    29	  92.0	    32	CTTTTCCCCGCATGCGCGGGGGTGATCCC	                                	       

# Left flank :   AAGACCCCCAAAACCCCGCAGCGCGGGGGACCGTGGCCGCACACTGCACAACACAGTACCAGAAGCAGTGGCTGTTGGAGCGCGCTGAAAAGCACGGCTTTGCCCTGCGGGAGGAGGAATTTACCGTGACCCGGGTGCAGTGGCAGCACTTTGCCAAGCACGGCACCCGGCCGGTGACCCTGCTGGCAGTGACCTACGAGGGCGTTTTACAGGTGACCGATGCAGAGCAGTTCCGGGCGCTGCTGTGTCAGGGCATAGGGCGCGGCAAGGCCTACGGCCTTGGGCTGATGACCATTATGCGCGGAGGAAACTGAGAGGGACGAGATGCCGGGCATGATCCGGCCGGACCTGCAGGCGCTGGCACAGTATTTTCAGCTGGCAGAAAAAGTGGAGCATCGCGCCCTGCCGGACTGCCATTTGATACAACAGGTTTATTGCAAACTGAAGGGAACAGCGGTACAATAGCAACGGGAGACACGGTGCTACGGGATCTTTTTAGT
# Right flank :  AAAGCCCCCTCGCAAGGTTTTGCGTGAGCGCCTGAAAAAAGTACCCATAAAGCAAACGAACCGCCCCGGTTTCCGTGATGGAAGCCGGGGCGGTTTTGTATGCAGGAGACCGGGGGCAAGGGCAGTTCCTCCGACCTTGCGCTTTCTGGCATTTCAGGGGAAAATGCGTAAACAAAAAGCAGGCAGTGTCGTGGAAAGGAGGAGGAAAGCGACACTGCCTGCTGTATAGGAACCCCTGAACATTGCGGCTTGATCAGGAGGGATTTGGTAGTCTGTCCGCCGTTCTGGCTATTGCCTCGCATAGAAACGGGAGACAGTTTTTTATGGGCCTGCTGTGCGCCGCTGCTGCGGCCGCACCCGCAGGGAAATGTGCCTGCATGGGTTTTTGCGGGGAGAACCTTTCGGAGGTTATGGGGGATGTCCGTTCCGTTCTCCCTGAGTGCACCCTTATTATGCCAGACAATCGTGGCAATTCTTTGTGGTAAATTTGAACAGTTTGC

# Questionable array : NO	 Score: 5.27
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.60, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.41,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTTTTCCCCGCATGCGCGGGGGTGATCCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [7,2] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGTTCCCCGCATGCGCGGGGATGATCCC with 96% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.30,-13.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [9-5] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [51.7-50.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.28   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//