Array 1 87224-84819 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABBCP010000004.1 Collinsella sp. KGMB02528 KGMB02528_contig04, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 87223 28 100.0 33 ............................ CGGACCCGGTACACATATGTATAATGAGATCAT 87162 28 100.0 33 ............................ CGACGAATGTTCTCAATACTGACACCACAGGTT 87101 28 100.0 33 ............................ CAGTATTTGACATTTGAAAGGATATATCATGGA 87040 28 100.0 33 ............................ CATCAATGGCGACGCCCGCAAGGCGTTCCTCGG 86979 28 100.0 33 ............................ CGGTACCGTCCGCACCAAGGTTTTGAATATCGC 86918 28 100.0 33 ............................ CTCAGCTTCCACTTTGGCGTCATGATTGCGGCC 86857 28 100.0 33 ............................ CGGTGTCAATCAGACCGTCATGCAGCAGGGTTA 86796 28 100.0 33 ............................ CTACACTGGAGATGGGTGCATCGCCCGTTACAG 86735 28 100.0 33 ............................ CAAGATTTCCGGCTTCGCGAGCAGCGTAGTCGA 86674 28 100.0 33 ............................ CTGCGGCGAGGTGTTGACACCGACGACATCGCC 86613 28 100.0 33 ............................ CCGCTGGTTGATGCATGGCAGCAGCTTATGGAC 86552 28 100.0 33 ............................ CTGAATGCCGCCGCGAAGGTCGGCGTTGCAGCC 86491 28 100.0 33 ............................ CTGGAAGGTGGCCGCGCTCGGGGTCTGCACGTC 86430 28 100.0 33 ............................ CATCGTCCCGCGCGTCTCCGAGATCGTGACGAC 86369 28 100.0 33 ............................ CATGATGGCGACGTCCTTGTCCTGCGCCATGTT 86308 28 100.0 33 ............................ CGTCCTCGCCCCCGCGCTGCAACCGCTCCAGCA 86247 28 100.0 33 ............................ CAGCGCGCGGAGGTCGCCGTCCTCCCCGCACGC 86186 28 100.0 33 ............................ CAGCAGTCAAGCGATGAAGTCGTGGGAGGTGAA 86125 28 100.0 33 ............................ CGGGCATGCATGCGACCGCGCTCGTGATGAAGT 86064 28 100.0 33 ............................ CAGTGGGTTCATGATTCGCCTTCCATTCCTCAA 86003 28 100.0 33 ............................ CCAGAGGCGGTGCCCGGGGTGCATCGCGAAGAG 85942 28 100.0 32 ............................ CAACTTTTTTAGCTTATTGGCAATTTTTTTTA 85882 28 100.0 33 ............................ CGATCAGAAGAGATACATGGCCACGGGCGCCGA 85821 28 100.0 33 ............................ CTTCTCGTTGACGTTGGCGTTCACCGCGTCGAT 85760 28 100.0 33 ............................ CGAGATGGAGGGCGCGGCGCTGGTCGTGTCACG 85699 28 100.0 33 ............................ CGAGATGGAGGGCGCGGCGCTGGTCGTGTCACG 85638 28 100.0 33 ............................ CACATCTGGGAAGTCTTTTCTAATCCTGTTCCA 85577 28 100.0 33 ............................ CGAGTATGCGAAGAGCATCGGCAAGGCCGGTGA 85516 28 100.0 33 ............................ CTTCACCGGCGTGAAGGCCTTCTTGTACTCGTC 85455 28 100.0 33 ............................ CTGTCACTGGACAAACCCGCTCTGGCAATGTGA 85394 28 100.0 33 ............................ CGCCCGCATTGACGCCGCGCGTAAAGCCCTCGA 85333 28 100.0 33 ............................ CTTGTATCGATGCAAGCGACCGCATGCATACCG 85272 28 100.0 33 ............................ CGTCCCGGGAGCGCTCTCAAGCACGCATGGGGA 85211 28 100.0 33 ............................ CGTGATGGACGGGTTCAAAATCTTGAAGCGTCT 85150 28 100.0 33 ............................ CTTCTCGGCATCGACGGAGTAGCCCTTCTCGGC 85089 28 100.0 33 ............................ CAGCACGAGGCGCGGTGAGACCGTCCTGGACGT 85028 28 100.0 33 ............................ CTTCAATTACAAGTCGGGCGGAATCAATGGAAT 84967 28 100.0 33 ............................ CTACTGCGACACTACTGCGTGATTTGCTTCCAC 84906 28 96.4 32 ..........................T. CGTCGCTAGCCCAGGCGCTTCATGGCCTGCCT 84846 28 71.4 0 .C.......A..C....A..A..T..AA | ========== ====== ====== ====== ============================ ================================= ================== 40 28 99.2 33 GTGCTCCCCGCGTATGCGGGGATGATCC # Left flank : GGCGTTCAATATGAGGACCCCTGCGAAAGGAGCCCTTTTTCTGCGGACGTGGAGGAATAGTTATGACGGTTATAGTGCTTTCCGCATGTCCTGTTGGGTTACGGGGAGATCTTACGCGATGGTTCCTCGAAATTGCTCCGGGAGTGTTTGTAGGTCATGTTTCTGCGCGCGTTAGAGAGCGAGTGTGGATTAGGGTAAAGGCTTTTGCGAAGTCGGGCCGAGCGATTATGGTGTATCCCGCTGCGAACGAGCAGCATTTGGCCTTTGAAGTTCATCAGCCTGATTGGGCACCCGTTGATTGTGACGGATTGAAACTAATAATGCGCCCCAAGGGTACGGAGGATGCGACTTTCGCTGGACCCCCAAAGAAAAATTGGAGCAAGGCGAGCCGCTTCCATAAAGCGCGCAAATTCAGTGGTTAATGAATTGCTGCTCGAAAGGTTCTTTGACAATCGAATGAAATAGTCTTAATTCGCTATATAATGACGAGGTATTTTAGT # Right flank : ATATTAGCTGTGCTAATATTTAATGTTGAGAGGACCCGGACGGTGACTAAGAAGGGGGTCTTGAGCGGGAGCCGACCGACGCTGGCTACGCCAAACTCAACGGTACCGGTGCCAAGCAAGGCAAGTTCCGCTGCGGGGACGTGTCGGTGCCGGTGCCGAGGCGCCGCGAGAAAAGAAGACGATCGCGAGAGGGGGCCAGGAAGAAGGCGGGGCAGCTCAGACTCTGCCTTCCTCTTCACCGCAGATAAGGAGTGAGCATGATCGTCATACAGGAGTTCGAGTTCTACCCCGACCCCGAGGGTGGCTATGTCGTGAAGCCATGCGGACTTGACGGAGCCACCGAGGGCGATACCTACGAGGATGCCGTGGAGATGGCGGTTGACTGGCTGCGCGTCCGTGCCCTGGCGGCGCTGGAGCGTGGAGCGGAGTTCAGGGGCGGCGGCCTCGGCCATGCGTCGTCTCGCGGCGGGACCGTTGTCACCCTGGCGGTGAGCGCTGAG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTATGCGGGGATGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGAATGCGGGGATGATCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //