Array 1 74824-73932 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMXQ010000005.1 Parabacteroides distasonis strain D59t2_181005_D4 NODE_5_length_345478_cov_30.655, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 74823 47 68.1 29 AAG..T.AG.AT...T...A...........C....CAA.......T CTTGGGGCGAATGGTGACGGTTGGCTTGC A [74808] 74746 47 95.7 30 ...........T...T............................... TCTCCTACCAAGGTGATACCCCTGATCAGC 74669 47 100.0 29 ............................................... TTTACGAGCTTGACCTAATGCTGATGATT 74593 47 100.0 30 ............................................... CAAACTCTTACTTACTGTTTACTCTTCGGT 74516 47 100.0 29 ............................................... GCTTCGATGGCACGTTCGGCCCAAAGGTT 74440 47 100.0 30 ............................................... ACGCATCTATGTAGGCACTTATGCCAAGTA 74363 47 100.0 30 ............................................... ACGCATCTATGTAGGCACTTATGCCAAGTA 74286 47 100.0 30 ............................................... GTTCACGTCTACCGTATCTCAGGAGGATGC 74209 47 100.0 30 ............................................... CGTTGGCTAGAAGCTCGCAAGCTCTTATAT 74132 47 100.0 30 ............................................... TTCGCTTTTTACCTTGTCAAGCGAGACTGG 74055 47 100.0 30 ............................................... CCATCAACTCCGACAGTACACTATCAAACG 73978 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 12 47 97.0 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGATCCATTGGAAACAGC # Left flank : ACTCGTGGGGGATTCGTCTGGGGTTGTCGTACAAGCAAGTTCAAGAGAATGCGTCGCTTTCCGGAGTGCTCACAGTTAAGCACCTCATTTATCAGCTCATCCTGTTTATCATATAGCCATTCGTTTTCCTTGGTCGAGAAATGGCTACAGACCCATAACGCTTGATAACTAACGGCATCATCCGGATCGAATATCAGATCGTATAGCTCTGCTTTCCGTTCTTGGTTCCCTTGTACATAAAATAATATCTCATGGATATCCTCTATATGACAGCGGCTTGATAGTCTCTCTTTTAGGTCCATTCTCAATCTTTGTTGTTGTCTCTTTATCTTTTCTGCCGTAAAGTTATAGTCTTTTTAGCAAAGTTTCCTTAGTTCGCTTACTTTTGTGCCCCATTGATAAAAGAATGGATAGATATGCGATATATGAATTTATTAAATGATTTAACAATTGATTGTAAAAATAACGGAGGGTGTTACCGAGTAAAGGATCAGTTGAAG # Right flank : TTAATCTGTATTATATGCTGTATATCAACTAGATGATAGAATGGTTAGAAAATAAAAAAGAAAAGTTTCCAATGTAATAAATCCCGTTTTATGACGGGATTTATTATTTCTAGAAAAGCTCTAATTGTTGGCCGGGTGTATTAGGAGGTTGTACTTTTTTCCCATAGAACAACTCAATATTCCCAAATTGTTTGTCTGTAATGCACATTATTCCTATTTGCCCGTGTTCTGGTAAAAATGATTTTACTCGTTTTATGTGTACTTCTGCATTTTCTTGGCTGGCGCAATGTCGCACATAAATAGAGAACTGAAACATGGTAAAGCCATCACGCTGCAGATTCTTACGGAAATCACTATAAGCTTTCTTTTCTTTTTTTGTTTCCGTAGGCAAGTCAAATAATACCAACACCCACATAATACGATATTCGCTAAATCGATCCATGATTATTACCGTTCTGGATACACGATTCTTCGTTGCTCTCCACTGAAACATTTGTAAA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGATCCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.90,-2.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,4.5 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //