Array 1 7503-7232 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHANM010000020.1 Vibrio metschnikovii strain M4G.2 Scaffold20, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 7502 28 89.3 32 ..G.G.G..................... GTAGCGATAATCCGGCGCTCGTTGAACCTAAC TC,A [7490,7495] 7439 28 100.0 32 ............................ GAGAACGTGGGGGATTATCTCTAGCGTGACGC 7379 28 100.0 32 ............................ TTTTCGCGCTCGCCCTCTTCCGCTTTGCGCCT 7319 28 100.0 32 ............................ ACAACATGCAACGGTCATTTTGAAAAGCTTTT 7259 28 92.9 0 .............C..........A... | ========== ====== ====== ====== ============================ ================================ ================== 5 28 96.4 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : TTTATCAAGTTAGTCGAGATGAAAGGCACTTTGAAAAGACGGCAGTTAAAATGCGCATTGAACACGGAGTTCCGTGAGCGAGTTTTATTTGGTAATTAACATTTTGTTAACT # Right flank : ATGGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTCAAGAGGGATTCGCAACGCGTAGCATTTTCATTATGCGTTGATTTTATTGGTTTTTAGTGTAATGCGGTGAGTTGGTAGTTGCGTTACTCACCCCTTAACGCGGCGTTAGCACTTTCTTGAGTTTTGTATAATAAATAGATAGGAAAAAATATGTCAGTTTTAGGTATTAGCTTAGAGAGAAATGGATTGAGGTATGCAGTGCTTGATGGAACGAAAGCGGTTCCAAGCCTTATTGGTTTTGAGAACGTACAAACCAATAATTTTACTAGCATACAACAACTAATGAATTGGTATGAAACTACTTTTCAAAACCTGCTTTCTCGCTACTCACCCACATCTATTGGTATTAAAGTTTCATTAAATGCGAAAAAAGATCAGATATCCCCTTGGTACTATCCTCTTGGACTCCTTCATAATATGGCATACCAAAATAATATTGGTACATTTGAGTTTGT # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 275-842 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHANM010000063.1 Vibrio metschnikovii strain M4G.2 Scaffold63, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 275 28 100.0 32 ............................ AGAAGCCACAGCAGCTTCAATAGCTTCAGAAT 335 28 100.0 32 ............................ ACAATGACCGAGCGATACAAAGATTCGGCAGG 395 28 100.0 32 ............................ AGCAATCAAAAACACCGCCACAAATGCAATTA 455 28 100.0 32 ............................ ACTTAGCTTCCTGCCGTGCTGGTCGTGGACTA 515 28 100.0 32 ............................ CTTCTCAAATCTCACAAACTCAATAATAGAAC 575 28 100.0 32 ............................ AAATTATGTTACGGGCTTCGCTAGCAAAGCGA 635 28 100.0 32 ............................ TAGATTGTGTAGGCGTGCCAAGTGGGTTTTAC 695 28 100.0 32 ............................ TTAGCTTTCGATTTAGCGTGGTATGCGTAGCT 755 28 100.0 32 ............................ CCGAAATTAAAAAGCATTTCGAAGCGTCTTTT 815 28 92.9 0 .............C..........A... | ========== ====== ====== ====== ============================ ================================ ================== 10 28 99.3 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : TAAAGCATAACAAACACTTCAAGAGGGACTTCCAACGCGTAGCATTTTCATTATGCGTTGATTTCGGTGGTTTCAGTGTTGTGCGGAAACTTGGTAGTAGCGTTGTCAGCCCCTTAAGTGGGCGTTAACTGGCAATGAAATTACCCATCTTTTTTCGTTGAATTTTAAGTTATTGATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACCATTATTAACAATAGGTTACTGCTAAAGTTTCATAG # Right flank : AATGGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTCAAGAGGGATTCGCAACGCGTAGCATTTTCGTTATGCGTTGATTTTATTGGTTTTTAGTGTAATGCGGTGAGTTGGTAGTTGCGTTACTCACCCCTTAACGCGGCGTTAGGTGTTTTCATGTTTAGATCCTTAAGTTGATGAAACAGATGATAAGATTTATTTTGAATTACTTTTTTGGCCTATTTATACCGACTCGTAGACAATTAAACGTAATTGCAAGTGTGTCTGAGTCTTTGGAAAATGAAAGTTCAAAATTAGTTGTTCGGCAGAAAAAGGAACTCGACTTTATAGAGCGGCATGATCTATTAAAGTTGAAAGTCGATCTGAAGTATGCAAGAGAACGTGCTGTAGATTTTGGTATTAGCCAAAAGGATTTGGAAATAGAATTATCTAAGATTAAGAGAGAGTATTTTTTATCTCATAATAAGCATCTTGAAAAATATTTAAAAAAACA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //