Array 1 233188-236459 **** Predicted by CRISPRDetect 2.4 *** >NZ_UCRN02000034.1 Acinetobacter baumannii strain J3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 233188 30 96.7 30 ............................A. TTAAGCCATTTTCTTTTGTGAATCCTAAAG 233248 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 233308 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 233368 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 233428 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 233488 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 233548 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 233608 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 233668 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 233728 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 233788 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 233848 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 233908 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 233968 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 234028 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 234088 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 234148 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 234208 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 234268 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 234328 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 234388 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 234448 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 234508 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 234568 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 234628 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 234688 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 234748 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 234808 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 234868 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 234928 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 234988 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 235048 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 235108 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 235168 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 235228 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 235288 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 235348 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 235408 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 235469 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 235529 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 235589 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 235649 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 235709 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 235769 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 235829 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 235889 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 235950 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 236010 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 236070 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 236130 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 236190 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 236250 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 236310 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 236370 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 236430 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 55 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.33 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //