Array 1 1118279-1118034 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOKG01000001.1 Endozoicomonas montiporae strain LMG 24815 scaffold00001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 1118278 36 100.0 34 .................................... GTTCAATAACTTAGCTAACATATTCGCCTTGTAG 1118208 36 97.2 33 ......A............................. GACAATCTGGCTCGCCTTCGTCGTGTGATTTTA 1118139 36 100.0 34 .................................... ATTTGGACATGCATGTCTCCTTATCTAGTTAAAA 1118069 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================== ================== 4 36 99.3 34 GTTCCGGAACTTCCCTGACTTTGAAGGGATTAAGAC # Left flank : GTGTTGACGACTTTATTCGGTCACGCCGTGGACAACACTGGCTTTCACTCATTGGTGACCATGAAGGCGGAGAAGGTTTTTATCCCATAATACGGAGTTTGACAGCCAGCGCCGCCCGGTTCTGTGGAATGTCATTAGACAAAAACCGTTTGAAAAACATTGTCCGTCAGCACGTCTGGCATAGCGACTCGTCCGGTCACAGTGATGATTATCTGAAAGAGATACTGACTGACCGGTCACTGGACTGCCTGATAGAAGGCGCTGTTCGTAAGTTTTCAACATTCTGAGAACCCTAAGAATGTAACTCATTCAATTTACGGAATCACAAACACCCCGTTTGAGTGCTTTCATGTTATGCTGAACCAGCAGCGGAAGGGGGCAACCCCGCCACCAGGAGAAGAACACCTATGAAAAACCGGCACTTTTTGCTGTATATAACAACAGTAGTGGGCAGCCCCCTTTGCAACCCCATGAATTTAAAGTACTATTTTGGCGGTGGA # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 2.82 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCGGAACTTCCCTGACTTTGAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.00,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 2 1155434-1155590 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOKG01000001.1 Endozoicomonas montiporae strain LMG 24815 scaffold00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= ============================================= ================== 1155434 23 100.0 45 ....................... CAGCTAAAAACGACATCAAAAAGCAATTTAAGTCTTAATCCCTTC 1155502 23 100.0 43 ....................... ATGAGCTGAAGATGCTCGGCTCTAAACAAGTCTTAATCCCTTC 1155568 23 100.0 0 ....................... | ========== ====== ====== ====== ======================= ============================================= ================== 3 23 100.0 44 AAAGTCAGGGCAGTTCCGGAACA # Left flank : AGGAAGAATAGATTGTGGTTTAAAGTTAACCTTGTAGTGATAGGTACTCACATCCACTGACTCAAGCTGTTCTGCAAAGTAAGTAACATTATCCGACAGACCAAGAAAATGTTTCTTGAACGAATTCTCGCCAGTTTTGCAGGTGACATCAAGTTTCTTACCATCAGTATCTGCTTTGATTGAGCATCGTCCCTCAACGGTGAGCATATAAGTATCCGTAATTCCATTGTAGAAAACGATGCGCCGGTTCAGCTCAAACATATCGGCTTTTCTGGAAAGGTTACTCGATGCGATTTGTGCGTCACGGCTGCATCCGGATACCAGAACAGCTGCTATTGTAGAGATTGTGATGAATATCTTTTTCATTTTTTAGATCCATTTTTAACGAGGGACAGATAGAAAAAAGCTTTTTAGATGAATTGTTACAGGCTGCTGACCTCTTTAGGCGGAGGGCTAAAGTTAAGTCTTTTGTGAAAGCAGGTGGATTACTTATTGTTTCT # Right flank : ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AAAGTCAGGGCAGTTCCGGAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [61.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 3 1162061-1161821 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOKG01000001.1 Endozoicomonas montiporae strain LMG 24815 scaffold00001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================= ================== 1162060 36 100.0 33 .................................... CTGGAGCAACGCCCTGACCAATCAGGTAATGAC 1161991 36 97.2 31 ........G........................... TCTTTCAATTCGCTTTCGCGCTTTGAGATAA 1161924 36 100.0 32 .................................... GTTCTTGCTAACTCATAAACATTCTTGTTATG 1161856 36 91.7 0 .............................C...C.A | ========== ====== ====== ====== ==================================== ================================= ================== 4 36 97.2 32 GTTCCGGAACTGCCCTGACTTTGAAGGGATTAAGAC # Left flank : TATCACTGAACAGCAGAGATTCTGCCTGCCCCAGACGAATAACCGAACGGCTACGGCTGACAGGCAAACAAAAAAAGGAATCACCTTCATCAATTAACGGCAGCAATTGTTCATACAGTTCAGTCAGCTCAGCTTCTGTGAACCAGCATTCGAATACCGATTTTTGACGACCGTCGCATAATTTGCGCAAACGATAGAGTGCCCGGTTTCTGTTTTTGTTATTACTGATGTCATAACAAACAATCCATGGTTTGGCAGACATGACGATGACTCCCGTGTTGACCGGATACAGTCTAATGAAATGCAACCCATTTTGTACTCAGACAAGCTTGTGAAATAATAGAAATAGCTCTCAAAACAAATATCAATGACTTACAGGACCCCTTAGCAGAAGACACCCAAAAACCATGAAAAAAGGCTGTTTTTCACTATGTATTTATACAGTGTTTGCTAACCCCCTTTGCAAGCCTATGAATCTAAAGTACTATTTGGGCTCTGGG # Right flank : AAAAAGCAGGCTCCCCCTCTCCAGAGAAACCTGCTTTGATCAATCAGACAACAAAGGATCTGGCAAAACAGCCTTGCTGGTCAACGTCTAAAAATCAGCTTTCTGCGGCTGCTTTCTCCGGTAAGTGTTCCAACTCCAAATGGGCGCGGTCTACCAGCTCGTCCGGCAGCTCTTTTCTGACCGATACTCCTAAATCCCTGAATTCTGAAGCCTGCTTAATCAGATTCCCTTTACCGGTATACAGCTGCCCAAACGCCTTGAGATAACTGTCTTTGGCTTTATCCAGTTGATTGCCAACCGCCTGCATACTGGTTAAAAAACCATTCAATTTGTTGTAAAACCGCTCTGCCCTGCTGGCGAGCTCTGCCGTGTGTTTATTCTGCTCTTCAAAACGCCACAGCTGTCGTACAATATTCAGACTGGTCAGCAAAGTGGTTGGTGTCGCAACCAGCACATTCTGCTCAATCGCTCGCTGATACAGTGAATCATCGTATTTCAAC # Questionable array : NO Score: 2.72 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCGGAACTGCCCTGACTTTGAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [9,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.80,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 248230-246127 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOKG01000003.1 Endozoicomonas montiporae strain LMG 24815 scaffold00003, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 248229 29 100.0 32 ............................. CCTCTTCATTCTCAATGGATGCTGCTTCTGGC 248168 29 100.0 32 ............................. GGCAGTAACTCACTACCTTTCATTGATTCTGT 248107 29 100.0 32 ............................. GCTTTTGCCTGACCACTGGGAGATACGAGCCA 248046 29 100.0 32 ............................. GACTATGCAGCCGTGATTATCGGCAGCAAAGC 247985 29 100.0 32 ............................. CTGGCACCATTGATCCGGACAGAACAGACGAG 247924 29 100.0 32 ............................. TCTACCGAAAGATGAGCAATTGCGGATGTCTA 247863 29 100.0 32 ............................. CCCTGAAGAAGTGGCTTCTATCATTTCGGCTC 247802 29 100.0 32 ............................. GTAAGAGTACCAATTTATCAATTCATTCGGCA 247741 29 100.0 32 ............................. GAAAAAATCGTACGCTAAGGTACAGTCGTACA 247680 29 100.0 32 ............................. TGGGGCCGCTATCGTGAAGCCGAACTGGTTGT 247619 29 100.0 32 ............................. CCAAGAGCAAGAATCACCCGTGAAGCCAGAAA 247558 29 100.0 32 ............................. TTATGAGGACGAAGGGAATGGTTGGTTCAGGC 247497 29 100.0 32 ............................. CTCTTTCGTCAACATGGAATGAAATTAATAAC 247436 29 100.0 32 ............................. GTTACATTGCTGACCCGCAGCATCAGCAGCCA 247375 29 100.0 32 ............................. CAGCAGAAGAGCTGATGATGGGAACGCTTGCC 247314 29 100.0 32 ............................. CCCTTTCTTCTGCGCTCAATGTTGGACACGTA 247253 29 100.0 32 ............................. AGGACAGCGGATCTCTGGGCTGATGCCAACCG 247192 29 100.0 32 ............................. CCGGATCAGTCCGGCATTATTAGCGGAGCAGC 247131 29 100.0 32 ............................. TGCCTGGTTACTAACGGTTTTATATAGATTGC 247070 29 100.0 32 ............................. AACTAACGACAGCCCACGTCAAAACCATTGCT 247009 29 100.0 32 ............................. TGGCGTGTATGGCTGGAGCGCACATTGTCACG 246948 29 100.0 32 ............................. GGTTTTTTAATTACTTTTCAGACTCTCTATTT 246887 29 100.0 32 ............................. GGCTAGCACTACCAAAACAAGAATAAAAAGGA 246826 29 100.0 32 ............................. CGGGAACAGGTGTATCAGGAAGGCATGTTCCT 246765 29 100.0 32 ............................. TGATGTCCCACATGTAGCAGGAATTGTTAGCC 246704 29 100.0 32 ............................. TCACCAAGCGACTCCTGTGTATTTCCTCCGGA 246643 29 100.0 32 ............................. ACTTTTAAATCAGCTTTAGATTCAGGGTCGTC 246582 29 100.0 32 ............................. CAAATTGCGGAAATAGAATACAGGTGTATGGC 246521 29 100.0 32 ............................. GTCGAGGTGATCAATGATCGCAACGGTAACGT 246460 29 100.0 32 ............................. CCCTTGATATATCTGTCAAAACGGTTACCCGG 246399 29 100.0 32 ............................. CGATCAACAAGGAAAAATACGAGCAGGATGAA 246338 29 96.6 32 ...C......................... AGTAGAGGTTACATATACGCCTGCTCCTGACA 246277 29 100.0 32 ............................. ATCAATGACGATAACTTGCCTAATTGCAGGCA 246216 29 100.0 32 ............................. CTAACCCTAATATGGGCGTGTCTGTTTATAGG 246155 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ================================ ================== 35 29 99.8 32 CTGTCTCCCACGACCGTGGGGATGAACCG # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : GTTGCAATAGCTTTGCCCACATTTCTCGACCGAAAGACCTCGATCAATTGGTAAGGGAGAACATTGCACAATTCTCTGAAGTTCATTTATTCTTTCATTGATCCACTCATTCAATGAGCACGTAACAAGATCCGTATCCCGAATTTTTACCTGACTTCCGGACGGAACCTAATGAAAGACCATGGACTCAACATTGCAGTGATCGGCTCAGGCATCAGTGGCTTGTCCGCTGCCTGGCTGCTGTCCCGACAGCACAATGTGACACTGTTCGAAAAAGACGACCGGTTCGGTGGTCACAGTCACACCGTCAATGTTGAGGATAATAACCAGAATATCCCTGTGGACACCGGCTTTATTGTTTTCAATGAAGCCACCTACCCAAACCTGACCGCATTCTTTGACCATCTTAATGTAGATGTTACAGACACCGATATGTCCTTTGCCGTATCCATGAACAATGGCCGGATTGAATACTCGGGTACTGATATAAACGGTTTGTT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTCTCCCACGACCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-8.30,-8.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //