Array 1 1060445-1066345 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABFUN010000001.1 Clostridium beijerinckii strain DJ078 Ga0423244_01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1060445 30 100.0 35 .............................. CTGATCCCAATAACATTATAATCATTTATAAAACT 1060510 30 100.0 34 .............................. GTATATGTTACTGTTGCATTAACTGTATTTAGTG 1060574 30 100.0 36 .............................. TAGACAACTAATGCTAATTAACTAAATAAAATTTAA 1060640 30 100.0 34 .............................. AACAGCTATAAAGTAGATGATATACTTGAGTTGA 1060704 30 100.0 36 .............................. TTTTCAAATTCTTTTGTTAATAGGAAATATGGTTCG 1060770 30 100.0 35 .............................. TTATACTAAATTTATACTAGTAATTTTAATTGTAC 1060835 30 100.0 36 .............................. AATAAAAAACCTTTTTTGAAACTGCTGTAATATCCT 1060901 30 100.0 36 .............................. TTTGGGGTAATCCCCTTTTCATTTACTAAAACTTCA 1060967 30 100.0 36 .............................. CCTCGCATTCTTAACCAGTGTGTAAATGTCTAAGTT 1061033 30 100.0 35 .............................. CTATGTAATTGGTATTGGTTTTCTTTAGGTATCTT 1061098 30 100.0 34 .............................. AAAGGCTTATCATCTATTTCAATTTCTTTATTTT 1061162 30 100.0 36 .............................. ATAAAAAATGATACGGTTTATAGAAGGATGAAAAAG 1061228 30 100.0 36 .............................. TTATATCAATAAGAGTAGTTTTTTACTACTCTTTTT 1061294 30 100.0 35 .............................. AATAATATTAAAAAAAATAGGCGGTTCAAAGGCTT 1061359 30 100.0 36 .............................. ACGGATTAAGGCTTGTACACTGTATTTTATGCATAA 1061425 30 100.0 36 .............................. TTGCATCAAGTAAAGACATTCCTTTTTGCGGCGCTG 1061491 30 100.0 36 .............................. AATTCCCAACATGCTCTAGAAAATTGTTTATCGGCT 1061557 30 100.0 35 .............................. CCTCACTTGCTGATTAAGTTATATATTGCTTTTAT 1061622 30 100.0 36 .............................. TATACAAGTAATTCATTGTGTAATTTTAGATTGTAG 1061688 30 100.0 33 .............................. AGACTACAAGGTTTTTTTCTTATATCCGTTACA 1061751 30 100.0 36 .............................. TGGATCAGGATATGATAGCCAAGTAGAACATTTAAA 1061817 30 100.0 36 .............................. TTAACATAGATGATGATAAAATAATAGGAGCGTATG 1061883 30 100.0 36 .............................. AAACTGAAAGTATAGAGGAATTAGGAAAAATAGTAA 1061949 30 100.0 37 .............................. TAGTTTATTGGTTTTTCTAATCTACTCACACATATTC 1062016 30 100.0 34 .............................. AAAACTTTTCCGTAGCTGAAAGCATAAGCAAAAC 1062080 30 100.0 34 .............................. CCTTGCAGCCACGGCGGATTCCCTTTATAAATGT 1062144 30 100.0 35 .............................. GCACTTTCTGAATTTGCCTTATCCAGTTTTTCTTT 1062209 30 100.0 34 .............................. AGCATTGGTACTAAATTATTTGTTTCGGTATATT 1062273 30 100.0 35 .............................. TAGCAAAGCAGATTATAAAAGTCTTCCTTTGATAA 1062338 30 100.0 35 .............................. AAGTAATTATCATATTCTTTTGATTGCTTTACTTG 1062403 30 100.0 36 .............................. GAAAACAGGAAATGCAGTAAGACAAATGGCACAAAC 1062469 30 100.0 35 .............................. AGTATTTCATTTAACATTATTCCTTTGTCGTTTGG 1062534 30 100.0 34 .............................. CCAATTTGTATTCCCCTTTTTTTACTTGGAATGG 1062598 30 100.0 37 .............................. GCATATGCTAGGAAAAATGGAGCAATTAGGCAGGTGC 1062665 30 100.0 36 .............................. CCAATATTGCTTAACATACCACTAGCAGCGCCACTT 1062731 30 100.0 35 .............................. TAGTCATTCGGTACTTTACCAATGTAGCTATCACT 1062796 30 100.0 35 .............................. ATTGAAAAACTTAAAGCTGAAACTGATAAATTAAA 1062861 30 100.0 35 .............................. GAAAGCCTTTTTATTTCAACCTCTTTTGTTGGTCT 1062926 30 100.0 36 .............................. TGAACCATTTGACCAGTGGAATATAAACAATAGTCT 1062992 30 100.0 36 .............................. GTACTACCGATAGTTGCTTTTATTTGTGCTGAAAAA 1063058 30 100.0 34 .............................. CCATGCATCTTATAGAATTACTTTTCTCAACAGG 1063122 30 100.0 36 .............................. ATGAAATCAACATCCCAATCCATAGGAAATGCAAAG 1063188 30 100.0 34 .............................. TCTAAAGGTCTTACTAATTCAAAACCAACAATTT 1063252 30 100.0 35 .............................. AAAAGAGCATAAGAATCATACAATTGAGCAATTTT 1063317 30 100.0 35 .............................. CTTAATGGGTTGTAGTTATTGTACAGAAGAACAAA 1063382 30 100.0 36 .............................. TCTCATTGCACAAAACTTCTAATCTTCCAATTCTGT 1063448 30 100.0 34 .............................. ACTCCTATTGTATAGAACGCTTTTGCGTTAGTAT 1063512 30 100.0 34 .............................. GTAAATACTTATCTTAGAAGAACTGAAGAGAAAC 1063576 30 100.0 34 .............................. GTGACATATACTTTTGATGTAGATACACAAAGTG 1063640 30 100.0 34 .............................. GTAAATACTTATCTTAGAAGAACTGAAGAGAAAC 1063704 30 100.0 34 .............................. GTGACATATACTTTTGATGTAGATACACAAAGTG 1063768 30 100.0 34 .............................. AATAGTCCTTCGGGGATTACTAAAAATACAAACG 1063832 30 100.0 35 .............................. TTATTAGTAAAAGTCTTCTCTAACGATTCAATTAC 1063897 30 100.0 35 .............................. CGATTTATAATAAATAATATTTTAATTATTTCCAG 1063962 30 100.0 37 .............................. AATATATTTAGTAGACAATAACTACTCACTTTCGACT 1064029 30 100.0 35 .............................. TCCTCAGTTGAGTTAATGCTTCTTTCGAAAAATCC 1064094 30 100.0 34 .............................. TTTTATCTCTCAAATTAGCATTTTCAGCATACAA 1064158 30 100.0 34 .............................. ACATTTAACGGACCATATAACTTTACTGAAATAG 1064222 30 100.0 35 .............................. ATTAGAAACAGAAGAAACACTTGCAGTAAAGTCAA 1064287 30 100.0 34 .............................. ACAGTTCTCTTATTTATGGGTGTGTTTCTAGCAG 1064351 30 100.0 36 .............................. TATAATTTTCAACATTCATTTCTACCTTTAAAACTT 1064417 30 100.0 32 .............................. AACAAATGAAAGTTCTACAGACTCAACAATGG 1064479 30 100.0 36 .............................. TATTGTAACCACTATCAAAATCAAAACCAATAAATG 1064545 30 100.0 37 .............................. CTTAGAATATTACTTCCATATGTTGAATACAACCCAT 1064612 30 100.0 34 .............................. ACAATAGAGTATTCAATATCATTCATAGTATCCA 1064676 30 100.0 35 .............................. GATAATAAAATTGATTATTTAGAAAGCTTTGAAAA 1064741 30 100.0 36 .............................. AGAAATAGTTTTTTCACTTACACAATCCGACCATTC 1064807 30 100.0 35 .............................. TTTATAAATGCTATAACTTATATGCAAAATAGAGG 1064872 30 100.0 36 .............................. TATTTTAATTCTGGCTCTGGTTCTGGTTCTGGGTCT 1064938 30 100.0 36 .............................. AGTGGAATTTTACTTCTTAAGTCTATACTATCTAAA 1065004 30 100.0 37 .............................. TTTATATAAATACCTTCTGAAAAGTCTAGGATTTCAA 1065071 30 100.0 37 .............................. TTTGTTTGAGATACTTTTGTTTCGCTATCATTGATAG 1065138 30 100.0 36 .............................. TTAAGAACACATATCAAACTAGACATATCGTCGTTT 1065204 30 100.0 34 .............................. TTCTTTCTTACTATACATTCTAAAATTAAATTAT 1065268 30 100.0 36 .............................. GGCTTAATATATAATGGCTGTCCACTTATTGCTTGG 1065334 30 100.0 36 .............................. AGTTGGAGCATTAACTCATTCCCAACTATTATTTCA 1065400 30 100.0 34 .............................. TTAGTGTCTTGTAGCTGTTTCAATACATCATCTT 1065464 30 100.0 35 .............................. TTTAATACATTTGCTATAGAGATGTAACCTACAAA 1065529 30 100.0 36 .............................. ATAGATTTAATATAATTAGATTCGAATAATCTATAA 1065595 30 100.0 36 .............................. GTAAAAAGTGATGAACTACTTTTAAATTTATAACCT 1065661 30 96.7 36 .............C................ CCTTATTCTAATTCACATTCAAATAGTTTTATTTTC 1065727 30 100.0 36 .............................. TCAACTCCGGCTCTTTTTTGTATTTTAGATATCATA 1065793 30 100.0 35 .............................. GTAAGAGGAATAGTAGAACCTCCAGCAGAAACCAT 1065858 30 100.0 36 .............................. AACTATGCGGCGTTTTTATTATTTATGTTTAGAACT 1065924 30 100.0 36 .............................. TTTGGATTACCTCTCTTCATCATATTATCTTTATCC 1065990 30 100.0 36 .............................. TCTATTCCAGTTGGTGAATTACTAAAAACAATTCCA 1066056 30 100.0 35 .............................. GCCAGTACTTGAACCTTTTCAACCTTATCATGCTT 1066121 30 100.0 35 .............................. TTCTTTACAAAAAGAAAAAGAACTGTTTCCAGTTC 1066186 30 100.0 35 .............................. CCTCCTTTCATTCATAAGTAAATGTTTAAGAGTTT 1066251 30 100.0 35 .............................. AAGCATTTCTCTGAACAAACTTCTTCATATCTTTC 1066316 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 91 30 100.0 35 GATTAACATTAACATGAGATGTATTTAAAT # Left flank : AGACTTTATTCCTTTTAGTTTAAAGGAGGACATGTAATGAGTAAAACAAGCAATTATAATTATGCATTTGTATTTTATGATGTCAATGAAAAAAGAGTACAAAAAGTTTTTAAGGTATGTAAAAAATATTTGTCTCATTTTCAAAAATCAGTCTTTAGAGGTGAAATGTCGCCATCAAAATTAATAAAATTTAAAACTGATTTAAACAAAGTTATTGATAAAAATGAAGATTTTATATGCATAATAAAGCTAATGAATGACAATGTCTTTGGAGAAGAAGTATTAGGAGTAACATCAGGAGTAACTGGCGAAGATCTAATAATATAATTTACCAGGCAAAAAATAATTGATGCAAGAACAAAACTAGATATAATGCTGAGTTACATAAGTATTTCTAGAACATTAAATTTTGGTAGTGGTACTTGGTAAATTTTTGTGAATATGTTACACTAACTACAGTTAGGGCATTATTCTAGTATAAGAATGGGCTTTTTTCTTTG # Right flank : TTTAACTAATCTTATAAATAATCGTAAGCGTCAAAAATTTAGTAAATAGAATTTAAGCACTTCCTTTGATACGATATAGAAAAAATCTATTCTTAAAGGAAGTGTTTTCTTATGGGGAAAGTATCCAACCATAATTCATGGAGAAAAACTATAAACGAATTTTATGCTTGTAATGATAATATTAAATTAAGCGATTTCTGCAAAGAAAAAAATATTACAAAAAGTCAATTTCATTATTTCAAGAAAAAGTTAGGTATAAATAAAGGAACTATTATTTTTCATTCTGTTTCTTTAAATGAAGATAAAAACATTATAGAAAACAATGAAATATCAGCCGCAAACGAAGTTACAATAACAATTGGAGATGCAAGAATATCTATTCCTTCATGCGAAGTATTATTGATATCTTCAGTAATTAAAGAGTTAATTGCAAAATGTTAAATATAGATAAAGTAGAAAAAGTTTATCTTGCCTGCGGCTACACGGATTTAAGGAAAAGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 2 1068974-1069843 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABFUN010000001.1 Clostridium beijerinckii strain DJ078 Ga0423244_01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 1068974 30 100.0 35 .............................. TCTGAATAAGAATAATTATTTACAAAATTATCATT 1069039 30 100.0 36 .............................. CAAGAAGAAAAACAATTTTCCTCATAATGTTGTCTG 1069105 30 100.0 34 .............................. AACTCCTTTTATGTAAGCCTTAACCGCTTTCCAG 1069169 30 100.0 35 .............................. TTTGGAATTAAACTCATTATTAATTGTGCATCAGT 1069234 30 100.0 35 .............................. TCTATTATTATTGCTGACTCTTGAAATTTTCCTTC 1069299 30 100.0 35 .............................. GCCGTTTCACTTATCCCAAAACTATTGTAATCATT 1069364 30 100.0 35 .............................. TCCCATGAGTAATCAAATTCGTCTATTAACTTGTG 1069429 30 100.0 34 .............................. AGTATTATTGTTTCGCCTTTATTCCATTGCTCAT 1069493 30 100.0 34 .............................. GTAAAAGAAGTTTAAATAAATAATTAGTTGGTGC 1069557 30 100.0 34 .............................. ATCAATTTACTAACATAATTCTTTTTACAATGTA 1069621 30 100.0 34 .............................. ATCTTTGCCACAATAATTTCTTTTCCCTAAACAA 1069685 30 100.0 35 .............................. AGACTTGCAATATCTACAGAATCTAAACCATTAAC 1069750 30 100.0 34 .............................. TTATCAATTAATCCTCTATGCATGTTTCCCTGAG 1069814 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 14 30 100.0 35 GATTAACATTAACATGAGATGTATTTAAAT # Left flank : GTTGAAATAGAAATCAAAAATGCTCTTCCAAGAAGTCCATTAGGTAAAGCACTTGAGTATGCTAAAAAGCATTTACCAGGATTAAAAAATGTATTATTAGATGGTTCTCTAGAAGTTGATAATAATGCTGCTGAAAGAGCAATTAAGCCATTTGTTATAGGAAGAAAAAACTTCTTGTTTGCGAATACGGCTAAAGGCGCCACTTCTAGCGCTAATATTTATAGCATTGTCGAAACTGCCAAGGCTAATAAACTAGTTGTAGAAAGATACTTAGTTTATCTATTTGATAATCTATCTAAGATAGATTTATCCGATAGCGAAAGCCTAGAAAATCTTATGCCTTGGTCAAATAAGATTCCTGAAAGCATGAAAATTAAAGATAAGAAATAACATTAATCCCAGTAAAGATATTTGCCTTACTGGGATATTTTAATGCATTTGCTAGTATATAAATAGGTACCAAAATTTTTACGCTTACAAATAATCTCTCATTTTCATTC # Right flank : TAATTCATTTACTGAAACGCAAAATAACGGCTAAATGTAAATGTTAATATGAAAGTGCATAAAAGTTCCAACATGGAAATGTAGAAATTTATGCACTTTTTATGTATGTTTTTTTCAAGATATAATTGTATAGAATTTCTAATGAAGTAGGTGCAATTATGAATGAGAAAAGATATACATAATAAGTTAAAAAAGTACACAGGAGAGGAGTTAGGCCTATTGAATAAAAGTGAATTAGCCCGAAGATTTAATTGTGATTCAAGAACAATAGACAGATATCTAAAAATTAGTTCTGGAGAACTGGAACAGAAAAAATCATCAAGAGTTTATAAGTCACTTATTGATGACTATAAACCTATTATTATCGAGAAAGTAGATACTTTCGGTGCCACTGCTATGGCAGTGTACAAATTTATTGATAAGAAAGGTTATAAAGGAAAATATAGTACAGTAGCAGCATTTATAAGTAAACATAAAAATGTTGAAATCAAGAAAGCCAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 3 1072109-1072988 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABFUN010000001.1 Clostridium beijerinckii strain DJ078 Ga0423244_01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 1072109 30 100.0 36 .............................. TCTACCATTTCATCAAGTTCTTCTAAATCTACATTG 1072175 30 100.0 36 .............................. ATGATATGATTTATAAATTAATTTCTCAACATAAAA 1072241 30 100.0 35 .............................. AGTATGGCTATCGCATTTACTTTAGTAAGTAAGGC 1072306 30 100.0 35 .............................. CTTAAAATTTTATTAGATGATGCTACAACAGGAAA 1072371 30 100.0 35 .............................. ATACTATACATTCCACTTGCAATAAGTTTATCTAT 1072436 30 100.0 36 .............................. TAAATTAAAAAATTAAAGTCTTGAAAAAATAAGGCT 1072502 30 100.0 36 .............................. GAATATAGGAATAGATCAAGCACAAGATGCATTAAA 1072568 30 100.0 35 .............................. CGTTGATACTCTTTATTATACAATATCTATTAAAG 1072633 30 100.0 36 .............................. CTAAATTTTATATTTGGCTGCTCTTGAACTGGTACT 1072699 30 100.0 35 .............................. CTCTCCTTGAATCAAGTTTTTATAAAAAATAAGCA 1072764 30 100.0 35 .............................. TATCTTCCTTATCTTGCTTCTCTTTAAGATAATTT 1072829 30 100.0 34 .............................. TATTCTTACAAAAGAAATTCTGTTGATATAATAG 1072893 30 100.0 36 .............................. CATAAAACTTTTTGCTTTCCAGTTTCGATTGTCATT 1072959 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 14 30 100.0 35 GATTAACATTAACATGAGATGTATTTAAAT # Left flank : AGCCGCAAGTAAAAGATATCTCACATATTTCATTACTTGCCATGATTTAATACAAAATTTAAGAAAAGCATATGATGAAAATCGATTGGAAGCAAGATTAAAACATTACAACAAATATAGATTATTAATCATTGATGAAATAGGGTATCTTCCAATCGACCAGTTAGGTGCTAACTTATTTTTTCAACTTATAACAAAGAGATATGAACATAACTCAACTATAATAACAACTAATCAACCATTTAGTAAATGGGGAGATGTTTTCTCTGATGTAACTCTGGCTAATGCAATATTAGATAGATTGTTGCATCATTCTCATATTGTTAAAATAATTGGACCTTCATATAGAACAAAAGATGTTTATGAATTAATTCAACAAGAAAGATCTCGAGATTAGTTAAATATTAACTATCAAATATTTATACATTTTAATGTTGGAACTTTTCAACATTTTGATATTGACATTTACATAATTCTAATTCTAAAATTTTTGTGTCTCC # Right flank : TTTATATAAATTTTAATAACTAACTGCTAATATCTTACGGGGTAAACCTACTGTATAAAATAACAAAGCTTTTTTAATTTACCCTTGTCCAAATTTAATACATCTAAATGTGACTTAACTTGTTGAATTAACTGAGAAAAAACTTCAAATACAGTATTATGAATTACAGCTTGGCGTAAATTTTTCCAAAGGTGCTCAATTGCATTTAACTCAGAACAATATGGTGGAAGGTATAAAAAAGAAATATTTTCTATACCTTTTAAGAAATCATCTATACCTTTAAAATGATGATATCTAGCATTGTCCGCAATCAATATAACCTTTTTATTTTGATAATTTTCAGAGACCGTATTTTAAAAAAGACTTAAAATTATCTGAATTTCCTTTATCAGAAATTTGATAGATAAGATCACCGGTCTCAGGGTTAGTAGCACCAAATACAACAGCTCTTTTTCTTGTGCCACCTGGTAAAGTTTTAACTATAGGCTGAACTCCGACTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [76.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 4 1074204-1076382 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABFUN010000001.1 Clostridium beijerinckii strain DJ078 Ga0423244_01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 1074204 30 100.0 35 .............................. CCTGGTTCCATTCCTTCTGGAATATCTCCATCAAC 1074269 30 100.0 36 .............................. TTAAAAAGTATTAAGGCTGGAGATAGAGTTTTAGTT 1074335 30 100.0 35 .............................. CTTGGTATAGCTTTCGAAGGTAATTATGACACAAG 1074400 30 100.0 36 .............................. GCCACAATATAAAAATAGCATTAAATTATGTCATGG 1074466 30 100.0 34 .............................. TATGATCCTTTAGTACCAACGTTCCATATGCCAG 1074530 30 100.0 34 .............................. CACTTTGCACAATCCTCTACTGTATGTCCGTGGA 1074594 30 100.0 36 .............................. TCCATTATGGCATCATAGTTATTATTTTCACAGTAG 1074660 30 100.0 36 .............................. TTACTACCCTCTCCTATCTTTCTTTTATTACTTTTA 1074726 30 100.0 34 .............................. CCAATAGGTGTGGAAATAGACCCCTTTACGTCTC 1074790 30 100.0 35 .............................. TCGAAGGTTCACCCATCAATTATTACCTCCTACAT 1074855 30 100.0 36 .............................. CCATTAAACGCCAAATCAAGCATATCAACTTTTACT 1074921 30 100.0 35 .............................. TCAGAAACTCGGAGACTAAAAAAGCACTACCACCA 1074986 30 100.0 34 .............................. GTGGGTAGCAAATTACAACCAATGTGTGGATAGT 1075050 30 100.0 34 .............................. GAGTAATATTAATTCGGTCCACCCTGCAGCTGAA 1075114 30 100.0 36 .............................. GTGGGCTTATGGTCCACCAGGTACCGAAGGCCCTTG 1075180 30 100.0 35 .............................. TATGGAAAACCTTCAGGTAGTATAGCTGGGTTCAT 1075245 30 100.0 34 .............................. TAGGTAGCTATTTGTGTGGCGTCTATGCATAAAT 1075309 30 100.0 36 .............................. TCTTTTGTAACATCAGCCTTTATGGAATCATCCCAA 1075375 30 100.0 35 .............................. TTAGCTTTTGTGGATTCATCTTTTTGCCTCCTAAT 1075440 30 100.0 36 .............................. TTATCACCAAAATTAGGTGACCAATAATCTTCTGAA 1075506 30 100.0 36 .............................. AAAGAAAGAAATTACAGGCTTTAGCATTGGAGGAAC 1075572 30 100.0 35 .............................. TCATCATCCAGGCATCTTAAATCGGATTCGGAAAA 1075637 30 100.0 35 .............................. AGTTGAGCAATAGATGCTAATGACATTCCATTTCT 1075702 30 100.0 35 .............................. AGATGGAGAAAAACAAAAAACTAATGAAGAAGGGA 1075767 30 100.0 34 .............................. AGCGGTAGTACAACAGGAGACGCTGAATTAATAG 1075831 30 100.0 36 .............................. ACTATTTCCATATAAATATCCTTAAGTAATATAGTT 1075897 30 100.0 36 .............................. GATAATTTAATCAAGTTATATTCTCTTTTGAATGCA 1075963 30 100.0 36 .............................. TGTATATCCTTGATCATATAGTATACAATGTTCAAT 1076029 30 100.0 35 .............................. ATTTATCTTCAATTTCTTTAAAGAAGTCGATATAA 1076094 30 100.0 36 .............................. TTTGGTTTTGATTTGACTAAGTATATCGGAGTTGAT 1076160 30 100.0 35 .............................. TGGAGCTTCAGTAAAATATCAAGTTGCCGAAGGTG 1076225 30 100.0 34 .............................. TCATTTTGAACATAATCATTATCGTTTAAAACAC 1076289 30 100.0 34 .............................. TATCTGACAATTGCGTATTAACGCTAGCCAACTG 1076353 30 93.3 0 ........................A....C | ========== ====== ====== ====== ============================== ==================================== ================== 34 30 99.8 35 GATTAACATTAACATGAGATGTATTTAAAT # Left flank : TTTTATTGAAGTTTAAACTTACCCAATTGACAAGAAGTTCACCAGTCCAATTATTATAATTGAGCCCGGAATTATAGGGTGATTCTTTTAAAATATTATCAACAATAGCGAGTTCATCGGATGTTAAAATTGTTTTCTTTGGAGGGTGTTCTAAATCTTTCAAGCCCTCTAATCCAAATTTATTATATTTATGAATAGTCGTTCTAATTGTAGCATCAGATTGTTTTAAAAGAAGAGAAATTTCAACACTAGATTTACCTTCAAATAAATGCAAGATAGTTAATAATCTAGTTTTAATTTTGGAATTTTTCTCACTTGTATATAACGCTTTTATAGTTTCATATGATGCATGCTTTGTATTAACAGTTAATCTTTTTCTCATATGGGCCTCCTGCTTAAATATTTGATATTTTAGTATGTCCATATATGAGAAATTTAAATAGCAACCTGTAATTAAAATTTATATAAAAGAAGTAAATAAAACCAGTAGAGATTTACAA # Right flank : CCAATAACGAACATAAACTTATATAATTTAAGCTCTTGTCAGAAAGTGACAACAAGAGCTTAGCTTTTTTGATTAAATGGATAAATAGAGCCTTATTTCAAAATATTTACGTATTCTATCTATTAATGTATACTTGTATTGAGTACATATTAGATAATATTTTGTTATGAGGGAGTGATAATATGAGTAAATATAGAAGTTCGTACTGTAAAATTTTCATCAACACAGATGAAGAAGAAGAAGTTATATTGAGTTTAATTGAAAAAATAACAATGGGTAGTAAAAAAAGATGGACAATCATCTCGGATTTAATGAAAATAGAATTGATAAACAATGAAGATTTTAGTGAAGAAAAAAGTGTTAAAGAAGAAGACGGTTTTCTATACTCAAAATATTATCTTGGTATTGAGCCTGGAGAAGGTATAAAGGAAGAACAGTATATTACAGGAGTAATAGTCTTGCTGGAAAATCTAAGATCATCAGGATACAAGGTAGTTGCT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //