Array 1 167316-167086 **** Predicted by CRISPRDetect 2.4 *** >NZ_JFHX01000032.1 Paenibacillus ehimensis A2 contig_32, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 167315 30 100.0 37 .............................. GCGACCATCTGGGCGAGCTGGCTCTTTTCCGTAATGG 167248 30 100.0 38 .............................. CATCGATCCATTCTTCACGTGGCCGGGTCCTGGGATCA 167180 30 96.7 35 .........T.................... GGTTTCTAACAACAGTCAAATGATCCACCTCCTTT 167115 30 86.7 0 ......................G.A..G.T | ========== ====== ====== ====== ============================== ====================================== ================== 4 30 95.8 37 GTTTTGAACGTACCTATGAGGAATTGAAAC # Left flank : CGCATTTGTGTCGTCGACCTCCAATGCTGCAAAAAAGCCGGGGGATCGACGACAACGAGGGCCGCGCGAGAACAGACATTTTGGTAGTTGGCGTGAGTGAGATTTGTTTTTTTATATGTGAAAAATGGCGTCATTGCGGCGTTTTTGCG # Right flank : ATGAGGCGAAAAACCTTGATTTATCAAGGCTTTTACGCCTCTGTTTTTTCATTTGGGGGCAAATTGGGGGCATTTTTTTCGGGGCTGAATCGGTCGAATTTTTCTGCAGCACGCCTTTCCATCGGCTTCGTCACGTGACTATACGTTGTGTTCAGCGTATGTTCGTCCTGATGTCCGAGTCGTTCCGCTACAGCTCGGGAGGGCATGCCTTGTTCAAGAAGAAACGTAGCTGATGTATGTCGAAGGCCATGGAGTTTCACATGTCTGAAACCATGCTTCTTCAAGAATTCCCTCCACCAATTCGTTGGCCTATTGGGATGATATGGTACCCCATACCCGGTGTGGAAAACAAATTGTCGGTTTCCGCCTTTCCATTTGGTCCCCGCCTCCCAGCGACGCCGCTTCCATTCCTTGCAGTATACTTCAAGCTCCTTCATATACCATCCCGGCATGACAATCGTGCGCATAGAACTCTCGTTTTTTGGGAGCTTGATCAGATG # Questionable array : NO Score: 8.65 # Score Detail : 1:0, 2:3, 3:3, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGAACGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 1 1504-1010 **** Predicted by CRISPRDetect 2.4 *** >NZ_JFHX01000059.1 Paenibacillus ehimensis A2 contig_59, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1503 30 96.7 38 ....G......................... TCGATACCATAGATGTATAGCTGCTTTTCGCCGCGTGC 1435 30 96.7 36 ....G......................... TGCAAGAGGATAGAAGGACTGGAATTGTTCGAGTGG 1369 30 96.7 38 ....G......................... ACGTAACAGGGTGGTATGTAAGTATCGGCGGTGGTGTA 1301 30 96.7 35 ........T..................... TTTCACTGGTCATCGAAAAATCAAGGGATTGCCTA 1236 30 96.7 35 ........T..................... CCGGCGAGTGAAGGAGTATGAAGAAGGAGTATAAA 1171 30 100.0 35 .............................. GATACTGTTTCATCCAAGTTGATTTTCTTCTTTGC 1106 30 100.0 37 .............................. TTGACCGTCAGCTACTGGATGAAATTGGAATTAACGC 1039 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 8 30 97.9 36 GTTTAGAACGTACCTATGAGGAATTGAAAC # Left flank : CGCATTTGTGTCGTCGACCTCCAATGCTGCAAAAAAGCCGGGGGATCGACGACAACGAGGGCCGCGCGGGAACAGAGGTTTTGGTAACTGGCGTAAGGGAGAAGTGTTTGTTGGATATGTGGGAATAGCGTAACGACGGCGTTTTTACG # Right flank : ACGAGTTGTTCTACAAGCTTCACAAGCGCGGACGACTATGAGGAGCAGGGATACCCCCGCTCCTTTTTACCTCAAAAATTTTAATAGAACTGCTTGATCAGAAATTCCGAGGATTTTTTGTTCCGTTCCCAAAATGGATAGCCGTACGAGGAAACAAGAGCATCCAAAAATTTTAGTAGGTCATCCCCGATATACCACATCTCAGCTTCTCCAAGGGTTTCTGTTACATATAGACGATAGGCTCCATCGTCCTTTACTTCAATGACGATGTGTACAGAGGCACCTAATGCGGTTGCAATGACGATCATGTTGTCGTAATACGCATCAAAGTTGACGTAAATACTGCGAACATCCTTTAAAGAGTATGTACGGGTATCCTGATTGCCAAATTCCATTCCATCCCATTAACCAAAGATAGTAATTGCGAATAGTCTTTCGGAAATTTGATATTGAGCTCATCTTCCATTAAGGTGATGGCTATCGGGGTTGCGGGCGGGTTT # Questionable array : NO Score: 8.85 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAGAACGTACCTATGAGGAATTGAAAC # Alternate repeat : GTTTGGAACGTACCTATGAGGAATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [43.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA //