Array 1 256397-257767 **** Predicted by CRISPRDetect 2.4 *** >NZ_BGBS01000066.1 Escherichia coli strain KS-P091 sequence066, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 256397 29 100.0 32 ............................. CCAGGGTGAGCCAGCGCCGCAGGAAGACACGC 256458 29 100.0 32 ............................. CGTTCCCAACGCTGAATATTGCTGGCATAGCC 256519 29 100.0 32 ............................. CCAATACGGAGAACCTTCATCGGTAATGGGGT 256580 29 100.0 32 ............................. GAGCGTAGAGATTCTCGAAACCGATCCGGACG 256641 29 100.0 32 ............................. GAAGTTGCGCGCACTAAGAAAAACAGGTTCGA 256702 29 100.0 32 ............................. CTGAAATCAATCGCCGGTCGTCGCCACGTTAC 256763 29 100.0 32 ............................. TCATCGAAAACCAGCGGATCGAATGGGACGCC 256824 29 100.0 32 ............................. AGACGGCGCGTAAAACTCATACGGCGACAAAT 256885 29 100.0 32 ............................. CTCGCGGGCGTGGAATTTAACGAACGGTTACC 256946 29 100.0 32 ............................. TCGGGACGCTGCGCGATCTGCATAGCAACGCA 257007 29 100.0 32 ............................. GTATTTTTGCTGACGGATTCTCAGAGAGTTTC 257068 29 100.0 32 ............................. TTTCTATCTCCCAGTGGGAGAGAGATGACAGT 257129 29 100.0 32 ............................. GTTTTGGCGATATCACCTGATGCCTGCAATCC 257190 29 100.0 32 ............................. GGGTATCGCACTGCGGCAGATGTTCCGGGGCC 257251 29 100.0 32 ............................. CATGAATATGGACGATGAAAAAATAAGAGAGG 257312 29 100.0 32 ............................. TTAAAACATTTTCCGAGCTTTGCGATTTATAT 257373 29 100.0 32 ............................. TAAAAATCATCATGGAAAATCAACCCGGCGAC 257434 29 100.0 32 ............................. AGCGCGCGCGGGCTACTGCACTCGGTGATAAC 257495 29 100.0 32 ............................. GCGATCTCGCGGAATACACCGACGAGGCGGGC 257556 29 100.0 32 ............................. TAAGGCCGTCGCCGGATCAGCCTGGCTATGCC 257617 29 93.1 32 .A.C......................... TTCTTGCGGGTGTTGCAAATATTCTTCACGTA 257678 29 93.1 32 .A.C......................... GACGCCGCCGCCGCGAAGCCGTTTCCGATGTT 257739 29 89.7 0 .A.C........................A | ========== ====== ====== ====== ============================= ================================ ================== 23 29 99.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGATGAACTACTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA # Right flank : ACCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACACCTCATGTTCAAAATAGTTCTCCATGCCAGAGAGGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATGATTCTTAAATCGTTAAGAAATTTTAATCTATTATTTTTTTAATATTGAATTAATGCCTGTTAATTTTTTCTTTAGAATAACAGTATATTTTTTAAGCTTGTTATTCATTGGTTAAGTAATAAATCTGGAAGTTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATAACCGCCTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 275846-276605 **** Predicted by CRISPRDetect 2.4 *** >NZ_BGBS01000066.1 Escherichia coli strain KS-P091 sequence066, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 275846 29 100.0 32 ............................. CAACAAAACGCTGGAAGCCGGAACAGATATCT 275907 29 100.0 32 ............................. CTTATTGAGTTGGCACAGGAATTACATGAGGA 275968 29 96.6 32 ..A.......................... CCGCCGTCGAGTGTAATACCCTGATCCATCGC 276029 29 100.0 32 ............................. AGATCGGCGGCCAGTGGATAACCGTTATCCCC 276090 29 100.0 32 ............................. GTGTGGTAATTGGTGGTCTGGCTGGTGGTTTA 276151 29 100.0 32 ............................. AGAATCTGGACACTGCATATACCGCAATCCGT 276212 29 100.0 32 ............................. GAAAAGCTACTTTTGTGTTCAACTGATGCATT 276273 29 100.0 31 ............................. CCGCGCAAATCCAGCGAGCCGCCGACGCTCA 276333 29 100.0 32 ............................. TTGCAAACCGTGGCAAACGCAATTAACAAAAA 276394 29 100.0 32 ............................. ATTGTTATAATTATTTATTGAAATATCATTCC 276455 29 100.0 32 ............................. AATCTATTGTGAATTTGAAATGGTCCAGCACT 276516 29 100.0 32 ............................. GGTAAAAACACGGTCTGAACCGACATTCATGT 276577 29 93.1 0 ...........AT................ | ========== ====== ====== ====== ============================= ================================ ================== 13 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTTGCCGCTGGTGAAATTGAACCACCACAACCCGCGCCGGATATGTTACCGCCTGCCATCCCTGAACCTGAAACGTTAGGCGATAGCGGTCATCGAGGACGCGGCGGATGAGTATGATCGTAGTTGTAACGGAAAATGTTCCTCCACGTTTACGTGGACGGCTCGCTATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTCGGAGATACATCCAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCTCAACTGGCAGGTTGCGGAAATGTAGTGATGGCTTGGGCGACCAATACCGAGTCAGGTTTTGAATTTCAGACCTGGGGTGAAAATAGACGTATTCCGGTGGATTTGGATGGGTTGCGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTATCCGTTCTTTAAAGATAAGGAAATGTTTTAATTTAGTTGGTAGATTGTTGATGCGGAATAAATTTGTTTAAAAACAGTTATGTATGCTTAGT # Right flank : GGGCGCACTGGATGCGATGATGGATATCACTTAGAATTCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAACGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCTATTCCGTGACTGCGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //