Array 1 72673-73130 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANPU010000013.1 Pseudomonas otitidis strain 9M NODE_32_length_93824_cov_23.0961, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 72673 29 100.0 32 ............................. ACGCTGGCGGTGCGGATCTCGCCCTTGGTGTC 72734 29 100.0 32 ............................. CTCGTCGAGCAGGGCGTTGGCTTCCTGGATGT 72795 29 96.6 32 ...................A......... TTCGGCAGGCCCGTCATCGGGCCGCTGAGGTA 72856 29 100.0 32 ............................. AATTTTCCCAAAGATGGGAGTTATATCGTGTT 72917 29 100.0 32 ............................. AACTCGTCGAAGTAGAAATTCCTGTGATAGCC 72978 29 93.1 33 ..A......................G... AAGCGCCGCATCCCCGAGGGTGCGGTGAAAATG 73040 29 100.0 33 ............................. GGAGGACGGCCGGAGTCTCTGGAGGACAACTGC 73102 29 86.2 0 ............T.C.......C.....C | ========== ====== ====== ====== ============================= ================================= ================== 8 29 97.0 32 GTGTTCCCCACGGGTGTGGGGATGAACCG # Left flank : GAAGAGACCATCCTCCCGCGCCTTTACCGCGAAGCCCCGGTCAACTCCATCTGGGAAGGCTCCGGCAACGTCCAGTGCCTGGACGTCCTCCGCGCCCTGTCCAAGGAGCCCGGCGTGCTCGATGCCCTGTTCAGCGAACTGGGCGACGGCCACGGCGACGCCCGCCTCGCCGCGCAGATCAACAACCTCAAGGCCGCCTTCCACGACACCGCCGACATCCAGTACCGCGCCCGCCAGCTCACCGAAGACGTCGCCGTCGCCCTCCAGGCCAAGCTCCTGCTGGAGGCCGGCAACGCCACCGTCTCCGACGCCTTTATCGCCAGCCGCCTCGGCGGCAGCGGCCGGGTCTACGGCACCCTCCCGCGCGGCATCGACGTCGAAGCCCTGGTCGCCCGCAGCACCCCGCACCTGGCCTGACGCCACCCTGGCAACAAGGGAAAACAGCCGGTAGATTTTCCGCTGCCGGCTTTCCCCTCTGGGATCAGCGGGTTACGGGAAGA # Right flank : CACCCCAAACCGGAATGGCCAGGCCCCACTGCGCGGCCTGCGTAGGATGGGGTGAGCTTGGCGAACACCATCACCCGGCCGCGCCCCGGCCCTAGGCCGCCCGCTCCGCCAGCCGGCGCTGGCCGGTCAGCGCCGTGGCCACGAACAGCGCTGCCGCCAGGCTCAGCGCCAGGGGCAGGCCGTGGGGGCCGGTGCCCATCAGCGCACCGCTCAGCAGCGGCCCTACCAGGCTGCCGATGCCCCACAACATGCCCACGCAGGCGTTGGCGGTGACCAGGTCCTGCCCGCTGAAGCGCTCGCCGATGCGCACCAGTGCCAGGGTGTAGACGCCCCCCGCCACCGCCCCCAGCAACACCAGCGCCGGCCACAGCAGCGTGGGCCGGGTGATCAGCCAGGGCAGCGCCATGCCGATGCCCAGCGCCGCCACCCCGCAGACCAGGTGCAGGCGGCCGCGCTCGGTGCGGTCCGACAGCCAGCCCAGCGGCACCTGGCAGGCCATG # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGGGTGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGGGTGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 83510-83720 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAANPU010000013.1 Pseudomonas otitidis strain 9M NODE_32_length_93824_cov_23.0961, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 83510 29 100.0 32 ............................. GCACCCCGGCGCGCCTGTGGCCCGCTGGCACC 83571 29 100.0 32 ............................. GCGCGTGCGAGCGTTTCCAGGGTGCGACGGGT 83632 29 93.1 32 .........................T..A GAAGAGCCAACCAGACTGCCGAAGGTCGAAGC 83693 28 79.3 0 C..........AAA..........-.G.. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 93.1 32 GTGTTCCCCACGGGCGTGGGGATGAACCG # Left flank : GGGTCGCATCATCCCGCTGATCGAAGAGGTGCTCGCAGCCGGCGGTATCCACCCGCCCGAGGCGCCGCCGGGGTCCGTACCGCCGGCCATCCCCAACCCCGACAGCCCCGGCGATGCCGGCCACCGGAGCCGGTGATGGCCTTTCTCACCGTGGTCACCGAGAACGTCCCGCCACGCCTGCGCGGGCGCCTGGCCATCTGGCTGCTGGAGGTGCGCGCGGGGGTGTACATCGGCGACGTCTCGCGGCGCACCCGGGAAATGATCTGGCAGCAGCTCGAAGCCGGGTACGAGGACGGCAGTGTGGTCATGGCCTGGGCCAGCCAGAACGAGTCCGGCTACGACTTCCAGACCCTCGGCAGCAACCGCCGCGAACCGGTGGACCACGACGGCCTGCGGCTGGTGGCCTTCCTGCCACCGACCACCGCAGATTCCACACCCAAATAATCGGTAGATTTTCAGGAGGTGATTTTTATCTTTGAGAACAAGGGGTTGCAGTTGGT # Right flank : GTCGCGACCCTACCGCCGCTGCCAGATCTTCCGGCCGCCCTGGTCTTCGGTCACCAGGTAGGGGGCGCTGAAGCGGTAGCGGGTGGCGGGCTGGTAGTCGGTGCCGCCGTCGGGGCGGACGAGGAGGATGCCGTCGGCGGTCTGCCATTGGCCGGCGTACTGGAGGGTGCCGTCGCTGTCGTAGCTCCAGTCGGAGCCGCCGCCGACGGAGCGGCTCCATTGCTCGACGCGGCCGTCGGGGGCGAGGTGCAGGGTGAGCACCGTGTTGAAGGAGGCGAAGCTGGCGCCACCGCTGTTGATGATGTCTTCGTGGACCCAGGTGCCGACCAGCGCCGGGTCCAGGGTGCCGGCGCCGGTGCGGGTGGCGCCTGTGGCGTGTGAGGGGCTGCGCTGGAACAGCGCCTGGCGCTCCAGCACCTGGCCGCTGACGGGGTCACGGGCGGCGAGGCGGGCGTTGAGCTGGTCGTTGCCGTAGGTGGCGGCGAGGGTGGCGATCACCT # Questionable array : NO Score: 5.51 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGGGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGGGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //