Array 1 14110-14439 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFFSN010000080.1 Enterobacter roggenkampii strain CORE_Ent4 CORE_Ent4_contig_80, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 14110 28 100.0 32 ............................ CACCGCCGCTGGCTGGCCGCTTATCATCATAA 14170 28 100.0 32 ............................ GGCAGCCGGGGATCTTTACAGATGTATCAATC 14230 28 100.0 32 ............................ AATGATGATACCGGTCAGGGGCGGTGCGGAAA 14290 28 100.0 33 ............................ AGCTTCGCTGGGTACACATGGACGCACGTTTAT 14351 28 100.0 33 ............................ AGAGCCCTGCAAAAGCCCAAGTTCAACAGCTTT 14412 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 6 28 100.0 33 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CTCCCGCAAACGCAGCCCGTTTGCCGCTGTCTCGGAGCCTGGCTGGAAGAGGTGAAATCCGGCCTCACAGAATCAATGCGTGATTTTCAAGTGGTGGAATTTGAGGACGAAGCGGAAAAACCGCGACAAAAAGAGTGGTTGCTGGAAGATACAGAAACGAAATGCGACTACTGCCGGGCGTTAAACCATGTGCTGCTGGTATCGCATTTTGACTGCGATATGTTGCCGCACCTGACGGGGTTGCTGCATGACATTACGCATTCAATGGCCGCGGATGTCGTTGCACCTCAAAGTGCAGAAACGGTAATTCATATTATTTCCTGAGTGCTATCTGAGGCATCGGGGGTGTTCCTCTGACGCCATTGGTTTAAACCCTTTTTTCTGATGCTTACGTAAAATATTGATTTATATGGTTATAATTTACGTCCCAGAAAAAGGGTTTTATGCGAAAAAGTTGATTATTTTGTTTGCTAACAATAGGATGGCGTTGTTTCCTTTCA # Right flank : CTGTTGAGATTGACCTGCCCCCACGATTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 8012-9786 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFFSN010000122.1 Enterobacter roggenkampii strain CORE_Ent4 CORE_Ent4_contig_122, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 8012 28 100.0 32 ............................ GCAATCCGGGAGACTGGTCAATCAGTCAGCCA 8072 28 100.0 32 ............................ TTGCTTTGCCTGATTCTTGTTCCGTGCCGGGT 8132 28 100.0 32 ............................ AGGAAAGCGGAGAGTTTCCACTGAATATGATT 8192 28 100.0 32 ............................ GTTCAGGCGCGAAATGGTTGCTACAGTACCCG 8252 28 100.0 34 ............................ CTCCAGGCTTTCGGTAAAGCTGTTTTATCCGCTT 8314 28 100.0 32 ............................ TGCCCGCCCGACGCAGACAGGCCAGCTTAACG 8374 28 100.0 32 ............................ GGTGACCCTCAACTATTACGGTAGCGCAGGCG 8434 28 100.0 32 ............................ AGGTAAAGCCCTTCATCGTGCGAACGGTAAAG 8494 28 100.0 32 ............................ ATCATAATGGTGACGACGGCGGCGCTGAACGG 8554 28 100.0 32 ............................ GAACGCCGACACGCTAACCTGGGTGCAACCAC 8614 28 100.0 33 ............................ CTTCGAGATAAATGGCGTCGGCTTTTTCGGTGA 8675 28 100.0 32 ............................ TGCAGCTGCTGCGCAAGCTGGCAGAGCTGAAT 8735 28 100.0 32 ............................ GGACGCTGTACACGAGAGTCAGGCGAAACAAC 8795 28 100.0 32 ............................ GTAACCCAGGAGCCGTTAATCATCTGCTGCAC 8855 28 100.0 32 ............................ AATCGGCTGGCACAGAACCACCCAGCCATTTT 8915 28 100.0 32 ............................ CTGAGCAGACCAACCTGAAGACCGTGCAGCAG 8975 28 100.0 32 ............................ TAATCCGTACTACCACTATCTCGAACGCATCT 9035 28 100.0 34 ............................ TCATTTCGTGGGGCATATGCTGCAGCAGCCGGAT 9097 28 100.0 32 ............................ TTTACGAAACCCGTCCGACTTGTTGCTAACGT 9157 28 100.0 33 ............................ CACGGGCATCGCGTTCAAGCATACGCTGAAGTT 9218 28 100.0 32 ............................ TCGAAAAGCTATCGTGTAGAACGCGGTATCGC 9278 28 100.0 32 ............................ TATGAAGCCATTCATTGTTGAGGTGGGTAGCG 9338 28 100.0 32 ............................ GCTGTTGTCTGGCCGCTGTAATCTGTCAAATT 9398 28 100.0 32 ............................ CAAGCGCAAACCGCATCGAACTGATCGAGTCG 9458 28 100.0 32 ............................ ATATACCGTACTGCTAACACCTGGAAGCGCAC 9518 28 100.0 32 ............................ ATTCAGCTGTGACAATGGTCCCCTCGATACCC 9578 28 100.0 33 ............................ GTTGAGATAAGCACGGAGTGTTGATGCGGGTAG 9639 28 100.0 32 ............................ GGCTGGACGAGCTGGGCCTGAACTCAATCGAC 9699 28 100.0 32 ............................ ACCGGCGCGGAGACGGCCACTACAGCAGCAGA 9759 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 30 28 100.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGGTTTGCATAAGCTGTTTGGCGGCGTGGGCTTTATCAGCGGTATGCTGGTGGAGAAAGGGCTGCCGGGGTTTATCGCCTACGGCGTGTTGATTGGCGAAGTGGTGGCGCCGATCCTGATTATTGTCGGGCTCTTTACGCGCCCGGCCGCGCTGGTGCTGGCGTTTACGATGATCGTGGCGTGGCTGATGGTGGGATTGGATGAGACATTCGCGCTCGACAAGGTCGGGGCATGGGCGATTGAAAGCCTGGTGTACTTCTTTATCGGCTCGCTGGCAGTGGCGTTTTTAGGGGCAGGGCGGTTTGCGCTGGGGAAAACACCTGCGTGGCGGTAGGGGTTGGAATCTGTTCCGAGGGAAGGGGTCTACGGACCCTTTTTTATTGGTGAGTTTTAAGTTGTTGATTTCACAACGGTGAATTGTTGGTGGGGAAAAAAGGGTTTACGGAGAATTTTAGGGGGTTTTCTTTATATCACAAGAAGATAGGTGTAGATTATTCCA # Right flank : AGCACTTCAGCCGGGTAAGCGTCGGTGGTTAGGGTCCAATGCCGAACAGGCAGTAGGCACAACGTAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACGAACGAACGTTTATTGTTTATGCAAGGACCAGATCGCCCTGCGGATGGCACGAGCATGCCAGCACGTAACCCTCGGCAATCTCCGCGTCGGACAGCGTCATGGTGCTGGTGACGGTGTACTCCCCGGAAACCACCTTTGTTTTACAGCAGCCGCACACCCCGGCACGGCAGGCCGCCGCCACCGGTACGTTGTTGCTTTCCAGCGCCTCCAGCAGCGTCGTGCCCACACGGCCAAAGAAGGTCTGCGCAGGCTGCAGTTTGGTGAACTGAATCCCGCTGGTTGCCGCTTCCGCCACCGGCGTGAAGAACTGCTCTTTGAAGAAACGGGTCACGCCGAGCGCTTTCACGTCTTCTTCCACGATAGCCATGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //