Array 1 361901-362417 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP070496.1 Natronoglycomyces albus strain DSM 106290 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 361901 29 100.0 32 ............................. AGGTATGCGGTCGCTGTGTCCTTTTAATCCAC 361962 29 96.6 32 ............................G GGCGCTTCCCACAACCTAGCCCCTAGCGTCAA 362023 29 100.0 32 ............................. TATGCCGCTATTCCGCGCCGATGCGAACGTGT 362084 29 100.0 32 ............................. CGAGAGTTTCAGCGCGTAAAAACCAAAAACGA 362145 29 96.6 32 ..............T.............. GCGGACAGAGGCCGCACCCGCCGCCCGCTGCA 362206 29 100.0 32 ............................. ATGCCACCGGTGGACCACCGCAAACTCAAACT 362267 29 93.1 32 ..............T.............G TCCGAAGACGGATCGGCCGGGCCGTTTGGGCT 362328 29 96.6 32 ............................A CAGGGCTGCCGGACAGGGCACGAAGAACACAG 362389 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 9 29 98.1 32 ATGCTCCCCGCGCACGCGGGGATGAACCC # Left flank : GGAACGCCTGGCCGACCCGCCAGCGGCAGTAGACGTCGGCGGAATCCATCGATATGGCCCTGACTATGTGGCGACAGTCCGCAACCGGCCCGGAGGATATTGGGTGGCCGCGGCAGAATCGCACGCCGCGACCCAAGCATTCACCGGCACCGCGCCCCTCGCAGCCGATGCGCTGGTCGGACTCTTTAGTGACGGGCTGACCAGATTGGTGCAACGGTACGACTATGACTGGGCGACCCTAGTGCGAACCGGAGCAACCGACGGCATGGGGCGGCTCTTGGCAGACCTCAGAGCAGCCGAAGTTGCCCAGTCGCAGTCTCACCGGCGGGCCAAAATCCATGACGATGCCACCGGAGTGATCCTGCACATTAAGCGGCCCAAGGCAACCGGTGGATACACAGCTGCCTCAACGCCGGTTGTGTCCGCTGCGCCGCGCGCGGCCGGCCGCTAAACTGAAGTAAAACCACGGCAATGCGCCACTGCGCCGCAGGTCAATAAGT # Right flank : CTATGACATGGATGAATGACGTAGCCTGTGCCGATGCTCCCCGCGCTAGTGGGGTAAGTCGTCGGCGGCCGTTGCTTCGTCCTGCTCTTTGGTTTCGGTCGCCGCCGGTTGCGCGCTGCTGCGGTTGTGCAGGTGGGCGCGCTCGCCGGAGCGGTCAAAGATGCTCAAGATTTCCGCTTCTCCCTCGTGCGCGCCGAAGACGTGGGGCACCATGGTGGAGAATTCGGCCGCGTTTCCCTCGTGGATGAGGATGGTGCGCTCGCCCAGCAGCAATCGGATGACCCCGGACATGACGGTGAACCACTCACGCCCTGGGTGGACGTGCAGTTGTTCGGGCCAGAAGTTTTCCTCGGCGGTGAATCGCATCTTGGCGACTGTCACGCCGTTGAGGCCGCGTTCGCCGGAGAGAATCCAGGTGGTTACTCCCGGCGCATGTGATGGCTGGGGCCGGATGACCACGTCTTCGTCGTCGGTGGGCTCCACCAGCTGATCAAGTGTGG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGCTCCCCGCGCACGCGGGGATGAACCC # Alternate repeat : ATGCTCCCCGCGCATGCGGGGATGAACC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCACGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1491169-1489246 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP070496.1 Natronoglycomyces albus strain DSM 106290 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1491168 29 100.0 32 ............................. CCTTCTGCGGTTCTTGACGTTCGTGGCCACCG 1491107 29 100.0 32 ............................. GACCCACGCATTCACTGTCCGGCAAATTTGTT 1491046 29 100.0 32 ............................. CTTTCTGTGGCCAGACGCGGCTGGCGGCCGAC 1490985 29 100.0 32 ............................. CCTGGCCCGGATGGGGCCGAATCTCGTGCAAC 1490924 29 100.0 32 ............................. GCCGCGACACCGGACGACTCGCACATCCCGAA 1490863 29 100.0 32 ............................. CGGAAGTACGGCAACCGGCCGACGAGCGCGGA 1490802 29 93.1 32 .C.........A................. GACGTCGGTCGCGTCCGCCGCCGCCAGTGTCT 1490741 29 93.1 32 .C.........A................. CCGAGAGGCCACCTCAAGGGCCACTGAGCTCC 1490680 29 93.1 32 .C.........A................. CTCTCTACTACCCCGACATCGTAGGGAGATCG 1490619 29 89.7 33 .C.........A................C GTTGAGCAGGTTGCTCCCGAACGTCCACAGCAC 1490557 29 100.0 33 ............................. GAGATTCTCGATGACTATTAACGACCAGTCGGC 1490495 29 96.6 32 ............................T CCAGCGCACGATCGATATCACGATGCGCGTGA 1490434 29 100.0 32 ............................. ATGGGCTCCCATGCCCCGCCTGGGGCTAGTTT 1490373 29 100.0 32 ............................. AGACGCGCCCGCGTCTGCGCCGTCCCGCGCCC 1490312 29 100.0 32 ............................. TGGTTCGGAACGATGTCATTCAACTTCCCGAA 1490251 29 100.0 32 ............................. CTGTGCGTCTCACGGGCCTATCCGGGTCCGAT 1490190 29 100.0 32 ............................. GAGTGGACATGTCGCAGATGACCGATGAGCAG 1490129 29 100.0 32 ............................. GCGGTTTGATCCAGTGGGAACGCTGCCGCCTA 1490068 29 100.0 32 ............................. GTATCTTCCGATACGCGCCCGTCTGAGACCCG 1490007 29 100.0 32 ............................. GCGGTTTGATCCAGTGGGAACGCTGCCGCCTA 1489946 29 100.0 32 ............................. TGGCTCAATGAAACTAGCCGCCTGCCCAACTG 1489885 29 100.0 32 ............................. TAGTACAAAATACAGTGCAAGTGCAGCCGCGC 1489824 29 100.0 32 ............................. ACTCCGTCTCCGAGTCCCCCGAAGTCACCGCC 1489763 29 96.6 32 ..............A.............. GCCATTTTCGAAGCCGATGAATCCGGAACTGT 1489702 29 96.6 32 ..............A.............. ACGACTACTGCCCTGACTGCCAGGCGGACCAA 1489641 29 100.0 33 ............................. CCGCCTGGCCTAGGGCTGCGTGGATGATTTGGT 1489579 29 96.6 32 ....A........................ TCGTCCCAGCCCGGCCGGAGCGATACCCTGAT 1489518 29 100.0 32 ............................. GTCCGCAGGATGTTCCATATGGGACTGTTTTT 1489457 29 96.6 32 ...........A................. CCGTGGCCGCTGCGGCCGCTTCGGCGCCGTTG 1489396 29 93.1 32 .A.........A................. ACCGTGCTGTCCAGATAAATCCGCCCAGCTAC 1489335 29 96.6 32 ...........A................. CGCTTGCCCAGTTTCTTTGCTCGGGTGGCGCG 1489274 29 96.6 0 ............................C | ========== ====== ====== ====== ============================= ================================= ================== 32 29 98.1 32 GTGCTCTCCACGGACGTGGAGGTCTTCCG # Left flank : GATACCCTTCAGGCAAAGACCACTCCTTGCCCACCAGCTGCCGCTGAAAACCCGGACACGCCTTCCCCACATCGTGCAGCCCAGCCAACAACATCAAGAACGCTCGACATTCCTGCGGCGACATCGATAGTTGATCCGCCAGCCATACTCGAAGTCGCGCCGAAAGATAAAGATCCCAAACTTGACCAGCAAACGCGCTAGCGTCAATGAGATGGCAAACCAGCGGGTACGTAACCAGGCCTTCCCCATCTCCATTTAGACCCCGAGACTTACCCCAGATGTTCAAGTCAACTAGATACTCATCCAAGAGAACCTCCACAAGATATCCTCGAAACAGCCAAACACTTCACATCATCGCACCGATCTATGACACCGACAGGCCCCGAAAAATGCGAAACACGCGCCGTACCAACAAGAACTCCACCGGCGAACCCCATCGTCCAAGGCAACTGGACTACCAAAACGTACAGACGCCTCGATAAAACCCCAGTTCGCCAAGG # Right flank : AGCAAAAACGTCAGCCTTGAAGCAAGTAGCCGGCGCCCCCAAACAATGCCCCAGGATAGATTGAGTAGCACAAGAGAGGGCGGTGATTACAACCGAATCTGAGCCCGTCTCTTGGGGACGCTAGTTCATCATGCCTCTATATCAAACAAGCGCCCTCAGAAATACGTGTGGGCCTACTGGCGAGTTGCTTCTGTTAACGGTGAGGCACCTACGACCAGTTTGTCATTGCGTCGACTGAAGCTCAGAATTCCCTCGCAGCTTGCACACTAGCGATGTAACGAGAGCTTGTGAATTGGTGGGAAGGAGCCGTAAATGGTGGGGTCGTGGGGCATTCCACGGTATTGTTCAAAGAGGTTTTCGACTTCGGTGATTTCCCGGAATGGAAGCATACTTGCCATCATGGAGGCGATTGTTCGGGTTGCTGTGAACGACTGGACTGAGGAACCAATCGCAATCGCCGATGCTGCTGCCTGGCAGGCTTCTTCGAGGTCACCCAGGCG # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCACGGACGTGGAGGTCTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.70,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 3 1500568-1500901 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP070496.1 Natronoglycomyces albus strain DSM 106290 chromosome, complete genome Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1500568 29 100.0 32 ............................. CCGCGGCCATCCGTCCGGCCTGAATCATCGCC 1500629 29 100.0 32 ............................. CCACGTACCGGGCGGAAGTCACGCATGCGAAG 1500690 29 96.6 32 ............................A ATTGAGAATGGCTCGCAATCGTCACGACCCGA 1500751 29 100.0 32 ............................. GATGACGTTCCATATCGCGGTGACTACTGAGA 1500812 29 100.0 32 ............................. CTTGCATAGGCCCTCAACGGTGGTGGGTTTGG 1500873 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 99.4 32 CTGCTCTCCACGGACGTGGAGGTCTTCCG # Left flank : CCGCTCTACGACTCCTACCCACCATCGTGCGTGACATCCAACGACTCATCGACCCTGACACCAGCAGTACCGAACCAGTGACGAACCCCGAACTGGTGCACCTGTGGGACCCCGACCTCGGCGACGTAGCGGCCGGAATCAACCACGCCGAACTCGACCCGGACTGGTGAACCATGGCCAACCTCGTCGTCATCTCCACCACAGCCGTACCCGACCACGTCCGCGGAGCCCTAAGCAGATGGATGGTCGAACCGACTCCAGGCTTCTACGTGGGCACACTGTCGGCCAAAGTCCGAGACGAACTATGGCAAGCAGTCAGCACCTCAGTCGCCGACGGTGCCGCCACCTGCGTCTTCCCCCACGCCGAACAAGAACAACGATTCATCATCCGCACCGCAGGAGAACGACACCGACACGTCATCGACTTCGACGGCCTCCAACTCATCGAATTCAAAGCCGAAAACGAACAAACGCCCGAATAAAACACCAGGTCAACAAGC # Right flank : GTCGATGAACATCGCTAGGGGAAGTACTAATTTGGTGCCGGTGAGAGCCCTAGCTAGGAGCTGGAACCGCTCGACATGCCGTCCCATATCGAACCAGGAACGCTTGCCTGTTTAGACAGCGGGCCAGCAAGAGCACCTGAGCAGCGATTCACGACTTCGTGGAGTCTCGGACTATGCGTTTCACGCTCGATAGACTCACACCGAACTGTTGAGCGATGTCGGCTTGACGTTCACCTGCTCGCCATGCAGCTGCAATCGCGTTTCTTTGGTCGTTGGTCAACCGGCGGTTCAACGCCCAAGGGCGTGCACTTACTGCGTAGTTTTCGACGCGGTGACGGCCGGTGGTCACATCGCCGGTGAGCGATGAACCGGCGGGGTCAGGATTGGCCGAACCAGGCGCATCGGGGTCTGGCAGTGAATCTATGATGCTCTTGACCTGCGACGATGAGTGTGAATAAGACGTCAGCAGCTCCAGTTAAGAATGATTGCTGGCTATCCGA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCTCCACGGACGTGGAGGTCTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.40,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 4 3787007-3787584 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP070496.1 Natronoglycomyces albus strain DSM 106290 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3787007 29 100.0 32 ............................. AACTGAGACCATCACAGACCGTGATAATTTGA 3787068 29 100.0 32 ............................. TAAAGGCGGCGACGAACCGCAGCGCCAAAGCA 3787129 29 96.6 32 ............................G TAGAGAACCAAACCCTCTAGTGAGGGATCAAA 3787190 29 100.0 32 ............................. ATACGAACAGCCCCAATCATTCGGGTCGTTCT 3787251 29 96.6 32 ............................T TAACCGCATCAATAGCTACGTAGCCACCCGGG 3787312 29 96.6 32 ............................G CGCCAAACGAACCGAACGAGCCCAACAATGAG 3787373 29 96.6 32 ............................G TCGTTCGATACAAGTCTGGCAATGTTCATGGA 3787434 29 100.0 32 ............................. TACCGCAACATCGCAGGCCACCTCGCCGGTGA 3787495 29 100.0 32 ............................. GGTGGCTGGAGCGTCACAGCATCATCCGAACT 3787556 29 93.1 0 .........................G..T | ========== ====== ====== ====== ============================= ================================ ================== 10 29 98.0 32 ATGCTCCCCGCGCACGCGGGGATGAACCC # Left flank : TGAGCCGCACAGCACCACCTTCGAGGTCGCGTTTGCAACGCCTGGGTCGATCAAGCTTGAGGTCGAGGCAGGCGACGACACCCATGTTCTCCTTTGTTCGATGGAGCCGGAGCGACTATCGCCAATGTTCGAGGGCGATGGCACCCTCGCGTTTCAGCCCGCTGAGACCGCACCAGATCACACAGACGCACGCGGCGACTATCCACATAGTCTTGATATCAGCGAGTGCTCGCTGGCTTCCTAGGAACACCGATCATCAAGTACTCCCCGACCGACCGGGAGGCGGCCATTCCAGACTCGCAAAACCACCCAGGCACCAGGCCCCAGCGAATCGGCCAGCGGCCCTGTACCAATAATGGCAACGCTTGCCGCATGCTCTTCTGCGAAGCACATCGGGCCAGCCATCAGATCAACTCCACGGATGCGTTCGGCCCTCAACGGGCGCAAGCAAAGTGAATAAAAAACCAGCAATCGGCGTGCTACAGTGCAGGTCAAGAAGT # Right flank : TCTGCCCCCGGCGCGGTATCCGTTATGTCTCCTTGGGCTCCTTTCACGCACCCCGCGTGGACCATTTTTCCTGTGCGGGTTTGGATTTGTGGTGGTTATTCCGGGCCGGATGCGGGTTGCCGCTGGCATCTGCTGGTGATGTGTCCCTTGGCGGCAGCGGTGCGCGGTCGCTGCCACCTGGGACGTGCGGTTGAGGATGTCAATGGGGCCGGGTGTGCTTCGGTGGGGTCTCCACTCGGTGTGCACACGTTGGCGGTGGTGATGTCCTCGTAACCGGCATGGGCCCGGGATTCTGTTGTGAGCTAGTTGTTATGTGGTTATCCCGCTGGTCTGAAAGATGGCTGCCGTGGCCTCGTCCAAACGGGTGTTGCTTGGCCGCCTGGTAGTAGCGACGGTGGTCGCGTTTGCGGCAAGGTCACCATCTGGATGACGCCTACAGTGCACTATCTGAGCCCCGAACACAGGCGGTGACTTCATCGAGGTTGACGATGGAGCTGTCT # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGCTCCCCGCGCACGCGGGGATGAACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCACGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 5 3801662-3801084 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP070496.1 Natronoglycomyces albus strain DSM 106290 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3801661 29 96.6 32 ............................C CGCAACGCGGCCATGAATTCAGAGGACAAGTG 3801600 29 96.6 32 ............................C GGGACAGACCTAGCTAGGATCGCTGATATCGA 3801539 29 96.6 32 ............................G CGGCGAATTCTTTCTACGCTGTGGGGTTGGGG 3801478 29 96.6 32 ............................C CCTTCATCCCCTTCACCATCTCCCACACCTAC 3801417 29 100.0 32 ............................. GAGTTCATGGGTAAGAGAGCGCGAAACACCCT 3801356 29 100.0 32 ............................. ATCGGCGTGTGTGTCATTGGCACATATACCAA 3801295 29 100.0 32 ............................. GATCGTGGTCGATATCAAAAATGTTCACACCA 3801234 29 96.6 32 ............................G GTAAAGAATATTCGTAAGGCAATGAGAGATAA 3801173 29 93.1 32 ....................A.......C TCAGGCCGCAACGTAGCGCTGTCTGAACTTGC 3801112 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 10 29 97.6 32 ATGCTCCCCGCGCACGCGGGGATGAACCT # Left flank : TGCACTTCCACAACACGCGCGGTACGGCGCTGGCCAACATCCTCACCGCCTTGGACTACGGGGTGACCGAGTTTGACGCGGCCGTGGGCGGCTTGGGCGGCTGCCCCTATGCGCCGGGCGCGTCGGGGAACGTGGCGACCGAGGAAGTCGTGCACATGCTGCACGACATGGGAATTGACACGGGTGTTGATTTGGATAAGTTGCTAGAGGTGGCCCAGTTCGCCCAAGAGATGGTGGGCAAGGAGCTCCCCAGCGGGGTGCTGAAGGCCGGGCCGAGGACGCGGCTTAGCGCGCTATAGGTCTTGCCAGGCGCTGCGTAGCGCGGCTCAGGAGCGAGCACTTGCTAGCTAGGTTCGGTGAGGCACAGAGCCGGGGTTTCGGTACAGCGTGTCACGAGCGGTGTTGTCTGCGAAGGGGAAGGCCCGGAACAAAGCGAGCTCATCGAGCCGAAAGTGAATGAAAATCGGCCATGGGCGGTGTTACGATGCTGGTCAACAAGT # Right flank : CCGCTTATCTTTTCGGTGCTGCCTGGTGTTGCCACGAAAGTCGGTCTGCACCAGTAGTTTCTCGTTCTTCCTATCCTCAGTTTGAACATGTTCAAAAGATCCTGTACGCTCAGATTCATAATTGAACACGTTCAAATCGTGTCCGATAGAAAGGAACCCCCATGGAAACGGACATGGCCATCGTCAGCTACTCGGTCTATCTTGGATTGGCCTTCGTGCTGACAGTCTGGGTAGGGCGCACCCTGGGCAGCAACGGCTACCACTTCATCAAGGACGTCTTTGCTGGCGACGAAGAACTTGCCACCGCTGTCAACAAACTGCTGCAAGTCGGCTTCTACCTGCTGAACTTGGGCTTCGTCGTCTTCTGGATGCCCGTCACCGAAGCCATCCACACCCCGCGCGACGTCTTCGAGACGGTCGCCTTCAAGCTGGGCGCCGTCCTGCTCATTCTGGGGGCCATGCACGTTCTCAACGTTGTCGTCCTCAACCGAATCCGCCGC # Questionable array : NO Score: 5.83 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGCTCCCCGCGCACGCGGGGATGAACCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCACGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //