Array 1 281539-277670 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKYO01000001.1 Acinetobacter ursingii strain TUM15569 sequence001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 281538 28 100.0 32 ............................ TGGAGTGAAATTGTCTCAGGTGGAATATGACG 281478 28 100.0 32 ............................ ACAAAAATGGTTTTTAGTTATCAATGATTTGC 281418 28 100.0 32 ............................ AAATACAAAGTTAAAGTTGAAACAGTCACAAA 281358 28 100.0 32 ............................ GCATTGTCTTTGATCTTTAGGGTATCAACCGC 281298 28 100.0 32 ............................ TTATGATTCACAGACTTGGACAATCAAAAAGA 281238 28 100.0 32 ............................ GCTATGTGTGCCGATGGCTACACGCGGAATAC 281178 28 100.0 32 ............................ GATTAAGATCACCAACAAAGGGGCGATTCAAG 281118 28 100.0 32 ............................ TCAATGGCTTCAATTGTTTTGGATTTCGATTG 281058 28 100.0 32 ............................ TATCGCAAAATCACCACCCAAAGTTACTTTTC 280998 28 100.0 32 ............................ TTGTTTCGCAGTTAAAGCTTTAGTCGAATCAT 280938 28 100.0 32 ............................ ACTGATGTTTTTGCCCGCATAAAATACGTGAT 280878 28 100.0 32 ............................ CCCCATTCGGATACTCAGAAGTTTGGGGAGTA 280818 28 100.0 32 ............................ AGCATCAATCAGATCAGCAGCAAGGTTTAAAA 280758 28 100.0 32 ............................ AGTTGGAAGAAAAAGCGGTTAAGGCTGCATAG 280698 28 100.0 32 ............................ TTGTTTCTTAGGCAACGGACGAACGTCATAGA 280638 28 100.0 32 ............................ CTCAACGTGTTTCGTATAACAAAAAAGAAGTT 280578 28 100.0 32 ............................ TCCAGTAGCACAGCAAGTTGATCAAAAAGACT 280518 28 100.0 32 ............................ TGGCGTGATTTTGATTCAATCAACTACTGATA 280458 28 100.0 32 ............................ AGTACCATCTGGGTTGCCATTTTTCGCAATTA 280398 28 100.0 32 ............................ CATAAGCGAAGCTTGAAAAGCGTCTTTTGCTT 280338 28 100.0 32 ............................ TGAACCATTAGAACTTGTTGATGTGCTAGTGC 280278 28 100.0 32 ............................ AATCAAACGGATTATCAGTAGTTGATTGAATC 280218 28 100.0 32 ............................ TGGTGCAGCGTGGATATGAATAGTGTATGTAT 280158 28 100.0 32 ............................ ATGAAGCGTTAATGATCGACCAATGTCCAAAA 280098 28 100.0 33 ............................ ATTTCAATGTGAAAAAGGACAAGCTCAGTCTCA 280037 28 100.0 32 ............................ ATAGGAATTTCACAGTACAAGGCAACATGGTC 279977 28 100.0 32 ............................ ACTAAAAAGGTGGATACTTGGTTGATGGATAA 279917 28 100.0 32 ............................ ATTCAATTACGTTGCCTCGAATCGTATCTGAA 279857 28 100.0 32 ............................ ATTCAATTACGTTGCCTCGAATCGTATCTGAA 279797 28 100.0 32 ............................ GTCAGTAGTAAGCGTACCCACAACGCCTGAAA 279737 28 100.0 32 ............................ TGTTCCAATCGTGGCCACTTTTCCAGAATCAT 279677 28 100.0 32 ............................ AGAATAGACCAATAGCAGAAGCACCAGTAATA 279617 28 100.0 32 ............................ GAAAATATGTTCTACCGTAGATTTGACCAAAA 279557 28 100.0 32 ............................ AGATGACGGCTGTACTCGCACTCAAAACGGTT 279497 28 100.0 32 ............................ GATTTTAAATTCGGCTTCGGGCGATAACATGA 279437 28 100.0 32 ............................ AGCTAATCATCGGGGGCAATCCAGCTTATGAA 279377 28 100.0 32 ............................ TGTGCAATTATTTTGAACGTTGGGAGTGTCGT 279317 28 100.0 32 ............................ ACGTATGGATGCTTTGGAGCAGGAATTAGTCA 279257 28 100.0 32 ............................ ATGACGTAAGAAATCATGTTATCGCCCGAAGC 279197 28 100.0 32 ............................ TGTACCAGAACCGTCACCATCGCCACTTCCTG 279137 28 100.0 32 ............................ ATCGCCACTTCCTGAACCATTTCCACCTGTAC 279077 28 100.0 32 ............................ TCCAGTACGTCAGATTTATGCAGATATTAACG 279017 28 100.0 32 ............................ TTTAAGAATAGATGTGCAGAGTTTTGACTCAT 278957 28 100.0 32 ............................ TGACCTGCTTTCCATCGATGACAGCATTTTCA 278897 28 100.0 32 ............................ TGTGTGCTTATGTGGCATAGTATCAAGCACAC 278837 28 100.0 32 ............................ GCGAAAAGGTTGATCTGGAAATGCGTAAAGCA 278777 28 100.0 32 ............................ AATAACAGCAGTTAAAATAGCGACAATACCTT 278717 28 100.0 32 ............................ GTTAATGCGCTTCCAGTCGCCTAGTTTATTTA 278657 28 100.0 32 ............................ TTTTTATAATATAGGGGTAGCGGATACGCAAC 278597 28 100.0 32 ............................ TACATACGACTTATAAAACTCAAGCATGTGAT 278537 28 100.0 32 ............................ GCCCGCTTTAGCTAACTTGACAGCAACAGGCA 278477 28 100.0 32 ............................ TAAAGCAACTTCTGAATATATGTATACAAATT 278417 28 100.0 32 ............................ TACGTGCGTAGGTGGTGATGTCTGGCGAATAT 278357 28 100.0 32 ............................ TGCTTGGGTCAGGGCAATTGCATTGAAGATGC 278297 28 100.0 32 ............................ AAATGAAATCATTAGATAATTATACAATTTAA 278237 28 96.4 32 ..........G................. AAGCAGCTATTTTTTCTCGGTCAAAGTGGAAT 278177 28 96.4 32 ..........G................. TGTAATGGCTCAGAATCATTAATCTTATATCT 278117 28 100.0 32 ............................ TACATACGACTTATAAAACTCAAGCATGTGAT 278057 28 100.0 32 ............................ GTTACTGGTGATGAATCTAGTCAAGTTGATAT 277997 28 96.4 32 ..........G................. AGAAGAATGGAACACCAGACTTATCACTTGCA 277937 28 96.4 32 ..........G................. AATAGTCTTGCTGAAAAGTTAAAGGCTGCTTT 277877 28 96.4 32 ..........G................. ATCTAATGGTGGCTGTATGAAGCAATACTTAC 277817 28 96.4 32 ..........G................. GAGAGGACAAAAAATTATTCACGCTGATTGAG 277757 28 96.4 32 ..........G................. ACTCTAAATAATTTTCTGGATTTTGCCCGAAT 277697 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 65 28 99.6 32 GTTCATGGCGACATACGCCATTTAGAAA # Left flank : TAGAGCAACTGAATCTAACTCATTGGTTAGCAAGGCTGCAAGATTATGTACATATCTTATCTGCTCGTAAAGTTCCTGAGGATAAGATCAACGGCTATGCTGCTTATTTTAAAGTTAATCCAAAATTGACAATTGAACAGCGTATTGTTCATCAGGCAGAACGCCGTGGAATCTCAATTGAAGAAGCACAGGAACACTTTAAAGCATTGGATCTGACGGAGACTTTTGAACCTTATATTAATATGAAAAGCCACACCAATGATATGAACTTCCGTTTGATTATTGGGAAAAAATGTATTGATGAAGCAAATATTGGAAAATTTGGAAGCTATGGATTAAGTCGTACATCCACAGTACCCGAGTTTTAACCCAATATTTTTTACACTCTTTAACAGCTTAATAAAATCAATAAGTTATAACTTTGCTTTAAAACTTTGGGTATTTCATACTTTTTAGGGATAAAGCACTGTTATAACTTTATTTTTTGCTTTATTCTTACT # Right flank : TGCAAACGACGAATAAGAGCTTAAGCTGATTGATTCACGAGAGTAGAATATGGAATCTAAATGATCGTAAAAATGAGTTAAAAAGGAATGATATAAACAAAAACGCACTGCTTCTGGCGAAACAGTGCGTTAGGTTAATAAGATTATGCTGGTAAGTCAAACCAGATCATTTCACTATCTTCAAGTGCATGAATCGTAGTTTTCTCATCAAACAATAAAGCATCACCTGCTTTAACAATTTGATTCTCAATCATAATTTGACCTTTAATCACATGTACATAATTGTGCTTTTGAGTTGCAGCAATCTCAAGTATTTTATCAGCTTCTAATACAGCCGCTTTCACTTCTGCATTTTGGCGAATATGCATAGCAGCATTATCATTTGGTCCTGCAATCAAGTGCCATTGGTTTGGCTGTTCACTCGGATCAAGTTTGATTTGTTGATACGTTGGTTCAGCATCGCGTACATTTGGATGAATCCAGATTTGAAACAGATGCAC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGACATACGCCATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCATGGCGACATACGCCATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.20,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [63.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 77532-76846 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKYO01000011.1 Acinetobacter ursingii strain TUM15569 sequence011, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ================================== ================== 77531 26 100.0 34 .......................... TCAGGCATTGCACGTTCTACCCATAGTTGAGGGT 77471 26 100.0 34 .......................... TATAGCGCGAGTGAGTTTGAAATTGTTCCACAGT 77411 26 100.0 34 .......................... CAAGACAGTTTTCGCTTCTGGGGTTCGCGTACGT 77351 26 100.0 34 .......................... AACAGGAAAGGGGCGTACTTTAGTTATTGGTAGT 77291 26 100.0 34 .......................... GTATCGACTTATGCAGTTGAAAATCCTAATTCGT 77231 26 100.0 34 .......................... GTAGTAATATACAACCAAACCAATTTTGGATTGT 77171 26 100.0 34 .......................... AAAACGTGCCGTCGCTTTCAATGTGTGTCGTGGT 77111 26 100.0 34 .......................... TGTTAAAAATATCTATAGAATAATTCGATCAAGT 77051 26 100.0 34 .......................... AGCAGGAATTTCTTTTTTAAACGACTTAAATAGT 76991 26 100.0 34 .......................... AGTTCAAACGATCTTTGAACCCAAATACACAGGT 76931 26 96.2 34 ..................T....... CCGATTTTTGGCAATAAAAAAGCACCCGAAGGGC 76871 26 76.9 0 .................AT...TTTT | ========== ====== ====== ====== ========================== ================================== ================== 12 26 97.8 34 TTCCTATCGCATAGATAGCTTAGAAA # Left flank : TAAAAATTCAGCTTTTTCGCTTGGTAAAAGTTTTGCATCCAGAATCTCGGCATCTGCGGCCCATTCTAGAGAAAGCGTTTGTAAAACTAGCGCAGAGCTTTCTGCAAAATAATCTTCGGTTCCCTGACCTAAATGAGCATCGTATTGACGTAATGCAGTCACTCCAAAACGAATAAAATCACGAATTGTTGTTAAGTTTTCTGCGGCTTCCTGTAATTGTTCAGGATTAATGGTCGGTCGCTCCACTCAGGGGTCTCCAAAAGATGATGATGCAAAACGGCTTATGATACCTTGTTTTGTCTTGCTTTTTAATGCCTAAAGCGAGTGGATTCAATTTTAAATCAAGTTGACTTATTGCTCTTTTTTAATCAATATTTTTCTTACTCTTTAATAATATAATAAAATCATACGCTTATGATTTAACTTATTTTTAAAGCATAATATCAAATTATTAAAATAACTTGTTGTTATTAAATGATTTATTAATAAGAGTTTATAGT # Right flank : CGAGAATCCAAACATTTTGTTTTTAATTGCTGCATCGCTAAAGGATCCATCGGTGCAGTCATCATGGCCCGATAAGCCAAACATTCCTGCGTTTCTTCTGTTGCTTGAGATTTGGCATTCAAGCTATGGCATCCCATCAGTCCCAAAGAGAAAATACATCCTAGAATAAATTTGATGAACATTGGATTTTCTATAAATCAGTATTTGTCGATATCAACTCCAATTTTAAAACGCAAAATAGCAAATAGAAACCATTGAATAGACTTGTTTCATAAGTCCCTTTCATTTCTGCCTATGGGAGAGAAATAAAGAGGGTTTAAACAATGATGAAAGACGTCATAGTGTATAGATCTTTTAAAATTTGCTTATTTTCATAAAATCTTCTGCCAATATATAAGCATTTTAAAAAGATGAGCTTAATAAAATGACAAATCCAGATATTCAAAGTGTAGAACTCACAAAAGCCTATCGTTTACTTAATCATGGCCCAACTGTACTGG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCCTATCGCATAGATAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: R [matched TTCCTATCGCATAGATAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.70,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-88.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //