Array 1 85754-84381 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAPE010000008.1 Arcanobacterium phocae strain 11893 NODE_8_length_101017_cov_113.349752, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 85753 29 100.0 32 ............................. GAAGAAGTATTCATCACTTCAATCAGCGCAGA 85692 29 100.0 32 ............................. GATCATTTCCACTAGCTCAAATGCGAATCTAC 85631 29 100.0 32 ............................. ACTGCTGATTCGGTAATCGGAGCCATGATTAC 85570 29 100.0 32 ............................. ACTTAGCTACTCCGGTTCCTGTAGGATCGCCT 85509 29 100.0 32 ............................. CTGACAGCAGACCCAGAGTTACGTTATGTAGG 85448 29 100.0 32 ............................. ATTCTGCAAGTGCCCTAGCGCGTTCGTTAGTT 85387 29 100.0 32 ............................. ATCATTGCGGGTGGAAGCCCGTGCCAAGATCT 85326 29 96.6 32 ............................A AATCGATTTTAACCGGCGGGATCACAAGACCG 85265 29 100.0 32 ............................. TCACGGATCAGCGTCGGAGCCTCATCTTGTAA 85204 29 100.0 32 ............................. TTCCAGTCGGGGTTAGCTAGGAATGATTCAAG 85143 29 100.0 32 ............................. AGGGAAGATGCAGACTGCGCAAGGCGCGCAAA 85082 29 100.0 32 ............................. TGAAGACCAGGCACGCACTTGGAAGAAGCAAG 85021 29 100.0 32 ............................. GTAGCGACGTGTGCGCAAGACGCAGTGAACCT 84960 29 96.6 34 ............................A CGGTTTGTCCTTTCGGCACGCTGATAGTGAATGG 84897 29 100.0 32 ............................. ATCGAAAATCTGGCTAGACTCCTTACCACCGG 84836 29 100.0 32 ............................. GAACTCTGGCATTTTATGTTCGTCTAATTGTG 84775 29 96.6 32 ..................A.......... ATCACAACCTTACAACTACCGGCAACTGACGG 84714 29 100.0 32 ............................. GATAGTCGCCACCCTGACATTGGGCAGCGAAA 84653 29 100.0 32 ............................. GCTAGCTAGGAGAGTTCCTTTCGTTAATGGTT 84592 29 100.0 32 ............................. AAAAAAGACCACCAAACGGTGGCCTCAGTCTT 84531 29 100.0 32 ............................. TTCGGCGACTACCCCGCCGAGGGATGGGCGCT 84470 29 100.0 32 ............................. AAGGTGATTTTGAAACCGGCTGGAAAGCTTGT 84409 29 96.6 0 ........................C.... | ========== ====== ====== ====== ============================= ================================== ================== 23 29 99.4 32 CTCTTCCCCGCACACGCGGGGGTATTTCC # Left flank : TAGACGCGATTTACGGAGGCAAATTCATAGCAAGCATATATTGGAAGACATGCTTGGCACGCTCATGGAGATCTTAGAACCACACCTGCCGAATCGTGATGATGATCGATTGATCAATGATAATGGTGAAGTTTCTGGGCACGTACAATACGGAAAAGATGATGAGTGATGTTTGCAGTCTTAACAATATCTGCAGTTCCCGAGCATCTTCATGGCTATGTAACCCGATTTCTCACTGAGGTTGAAAGTGGGGTTTACGTCGGAAATATTTCTCGGAACGTGCGTGAACGCCTATGGGAACGTGTGAGTAGTACGCTTGACGAAGGAACTTCTACTATGATTTATAGCGACCCGCGACAAGAACAAGGATTCTCGATGCTCACTGCAGGAAAAAATTCACGAAAAGTATTGGACTTAGACGGTCTAACCGTTGTGTCCATGCGTCCTGGACGTGGAGAATCCAAAATTCGAGATCGTTGAAAATAAAGGGTTTCGTTAGT # Right flank : AAAATTTGAAGGCGATTCAAAGATGGGCGCTCAAGTGATCGGAACGATCATGATCAAGGTAGCGCTTCTTATTGTCGCTATTCAAAATGTAGATCTAATTCTTAAAGCTATTAACGAAGCTGGCGAAACACTTATTAACGGGCTGAAAAAGTATGCAACAGTCATACAGGCTAACCCTGTCAATATCGGTGATCTTGATATGGATACTCTAGATATGATCGGCGCAATGATCATTCTATTCTTGCCCTGGCTGATTTCAATGCTTGGCGGCATCGTCGTAAAAATCGTTGTACTCTTGCGATTTGCTGAGATATACATACTTTCTGCTGGGGCAACTCTACCGTTAGCATTCTTGGGTCATACCGACACAAAATAAATTTCGATCGGATACCTCAAGAAGTATGCAACGGCCATGCTTCACGGTTTCACGATCATCCTTGTCCTGATCATCTTTGCCAAATTCCAAGGAGCCGGTACAGACCTAGGAGAAAACCCAACAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCCCCGCACACGCGGGGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //