Array 1 50715-48841 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAMZJ010000020.1 Clostridium botulinum D/C strain IZSVe-TV_5262_6_14 NODE_20_length_60506_cov_64.9205_ID_8178, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 50714 30 100.0 36 .............................. TGATAAAAAATTACCGTATATTTATATAATAATAGA 50648 30 100.0 36 .............................. AGATGTCTCTAATACACTTCTATCGAGTAAAGTTCT 50582 30 100.0 36 .............................. GCTTCAAGGACATTAGTATCTACATTCCCATTATCG 50516 30 100.0 35 .............................. TAAGATACTAGATTTCCCTTATTCATTGCAGTTAA 50451 30 100.0 35 .............................. TCTATGGTTTTATCTTTATTTAGATACTCTTCTAT 50386 30 100.0 35 .............................. TTTGCACGTACTGGACATAAACAACATGAACAACA 50321 30 100.0 36 .............................. GAAACCAAAAGCCATCAATAGAAACTCACGCAATAC 50255 30 100.0 38 .............................. ATAAAGTGCTTTGAATTCTCTCTAAAATTTCTTCCAGC 50187 30 100.0 35 .............................. TAGGGTAACGACCTTTCTATAGTAAATTTCATATA 50122 30 100.0 37 .............................. ATTTCTACACTGTCTAAACGTTCTAATGTAAGTACAA 50055 30 100.0 37 .............................. AGGCTATGTCTGGAATGCTTGCAATTATAAATGCATC 49988 30 100.0 37 .............................. TCTTTATTTTTAGTTTCTAGTTTTACCTTCTCACCAA 49921 30 100.0 35 .............................. GAATTAAAACTTCAAGAAGATAAAATTAACAAAGA 49856 30 100.0 36 .............................. AGAGAAGAAATTATCATCAGACACTATTAGAAATAA 49790 30 100.0 36 .............................. TTATTATTACAAAAAAACATTGCTATAAATCAGCAA 49724 30 100.0 36 .............................. ATGATGAGATGAGTTAAGATAGGTAATATCGTTCAA 49658 30 100.0 36 .............................. CAAAAATAAAAATAATATTAGACAAGGTTCTCAAAA 49592 30 100.0 36 .............................. TTGCTCACAATCACAGATGTTTCGTTCTCAGTAAGC 49526 30 100.0 36 .............................. ATAGTAGAATATATCGGAGACTTAACTTGTAAGTAC 49460 30 100.0 36 .............................. CAAATCATTTGACGTGCAATGAAGATGTAAATTGCC 49394 30 100.0 35 .............................. GTCAATAATGATACTAAAAAGAATTTATCTTTAAA 49329 30 100.0 36 .............................. ATTAAAGGAATCTCCTGAATGGGTTCAAGAATATAT 49263 30 100.0 37 .............................. TAAAGGATCCAGGAGATATAAGAATCAGTTGGTATTG 49196 30 100.0 36 .............................. ATATCAGTTTCTAATTTTTGTCGTATTCTCATTAAC 49130 30 100.0 36 .............................. ATCCAAATCCTAATACATTTAGGATTTCAACTAGTG 49064 30 100.0 35 .............................. TATATTAAGTTATCAAGTTAAACATAATATACTAA 48999 30 100.0 34 .............................. TTAAATCCTTATATAAGTATTGACGGAGGTTTTC 48935 30 100.0 35 .............................. CTGCATTAAAATATTTTAAACGTCTTAATACGTTT 48870 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 29 30 100.0 36 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : AAGCCATTTAGGCTTAAGGAGAAGATATAATGAGTAAAAAATTTAATTATAATTATGCATTTTTATTTTATGATGTGAAAGAAAAAAGGGTAAATAAAGTGTTTAAGGTTTGTAAAAAGTATTTAACTCATTATCAAAAATCTGTTTTCAGAGGTGAGATAACACCTTCTAATATAATAAAATTAAGAGAAGATTTAAAAAAAGTAATAGATGAAAGTGAAGATTTTATATGCATAATTAAATTATTAAATAATAAAGTATTTGGAGAAGAAGTGCTAGGAGTAGATATTGAAACAGCAGAAGATTTAATTTTATAAAATTATTTTACCAACTGCTTCGAAAAAATAAAACGGTCAAAAGTGTTGATTTTACTGGTTTTCTATGTAACTTAAACTGAAAAAAATAAGTTGTTAAAATTGGTTGGGAAAAAATTAATGAAAGTGTTTATTTTCAATAGGTTTAGGGGTATAATAGAAACAAGGAATGGCTATTTTACTATG # Right flank : AGAAAGTAAGTAAATATTAATAGAAGTTGTTATAACAACTTCTATTATGAGAAGAATTGTTATAAAAGACATGAATGATAGATGTTTTTGAAAAATATACTCAAAGTTACTCAAAAAATGACTAATATACTCAAAAATTTAAAACACCCCTATAAGTAAAAACTTATAGGGGTGTTTTAATTATCTGGAGTAATTAAATCTATATTGTGTTCTTGAAAAAACTTAACATATTCTTTAGGTGGAAGCTTATCGGTAATAAAACAAGTGATATCTTCCAAATTACAATAAGTTTTAAGAGAAGCTGTATCTAATTTTGAGTGATCAGCTAAAAGTATTACATTTGAACTATTTTCAACTACTGTTTTTTTTACATCATATTCAAAATTAGATGAATTAGTAACTCCTTTATCAATAGAGAAACCTGTAGTGGCCATAAATGCTTTCGATATATTATAATTTTTTAGGAAGTTTGAAGCTTCTACACCGATTAAAGAATTAGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [78.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 30634-31388 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAMZJ010000037.1 Clostridium botulinum D/C strain IZSVe-TV_5262_6_14 NODE_37_length_31606_cov_46.5178_ID_8212, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 30634 36 100.0 34 .................................... ATATAAATCTTATTTCCATCAAATACATATCTAG 30704 36 97.2 34 T................................... AATGCAAGTACTGTTTTGAGATGGCTACAGAAAT 30774 36 97.2 35 T................................... CATTAGTTATTGAAGAATTACCATCATTTCCACCT 30845 36 100.0 37 .................................... TATTTGAGTTGTTAGACTCTAATAAATTAAATGGATT 30918 36 100.0 37 .................................... ATAGATGAATTAGAGGATTTAACTTATGCAGTAGATA 30991 36 100.0 36 .................................... TTATCTAAATTGGGACTACACGAATCATGCACAAGG 31063 36 100.0 38 .................................... TATAAAAGATGTTGAAGCCTATAGAGCTAATAAAAAAG 31137 36 100.0 36 .................................... AAAAGCATTAGGACATACTGTTGTAAATTGCACTAC 31209 36 100.0 37 .................................... ATAGGAAACTTTGATAATGTAGTAAAAAACTAAGTAG 31282 36 100.0 35 .................................... CTTCTAGTTCTTCTTTAGTATAGTCTTTACCTTCC 31353 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 11 36 99.5 36 GTAATAAAGATATTAAGCTCCATAGGAGATTGAAAC # Left flank : GCATTAATGAAAGAAATTGAATATATACCGTTTTTAATTAGATAAGATAGGAGAAAATGTGGTATGATGTATTTAGTTAGTTATGATATTGTTAATGATAAGAAAAGAACAAAACTTCATAAATTGTTGAAAAACTATGGTGTAAGAAATCAGTTCAGTGTTTTTGAATGTAATTTGGATGATAAAAAGTATGTTGAACTTGTATATAAGATTAACAATATTAAAGTAGAGGCAGGAGATAGTATAATGATTTATCCATTATGTTATTCTTGTAAATCAAAAATAGTAAGAAAAGGTTCATTTATTGAAATAGATGTAAAAAATATGATTTTTTAATGCGCCAAGCTTAGTGTTTGAAAAAGTACGTTGACATGGCGATGGCTTTAAATAGCCATTTGTAGATAGTTTTTTATAGTATTGGTATAAAATTTAAAATAATAATAGATACTTTGCGAATAATGCGGGTCTATGTTAGTGTTTGTGAGGGATAAAACGCCGGC # Right flank : GAAAGTAGCTAGTCTTGAATGGTTAGCTACTTTTTATGTAATAAAGATATTAAGTATAAGTGCTATTATGGGAATGCAAGAAAGTGATCATCTAAGGATATAAGAATTAGATTTATGTATAATACTATAATTACAAACATTTAAACTGGAGGTAATTATGATTATACAAATGAATATTAATTCTGAAATACAAATAGATAAGTTAGAGGATCTTCATA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAATAAAGATATTAAGCTCCATAGGAGATTGAAAC # Alternate repeat : TTAATAAAGATATTAAGCTCCATAGGAGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.70,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : NA // Array 1 28082-28959 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAMZJ010000039.1 Clostridium botulinum D/C strain IZSVe-TV_5262_6_14 NODE_39_length_29053_cov_77.4213_ID_8216, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 28082 30 100.0 35 .............................. TTATTTGTAGCTATAACATCTTTGCCACCATCACA 28147 30 100.0 33 .............................. GGGTTTTAGGACCTGTAAGATATTGACTAACAA 28210 30 100.0 36 .............................. ACATTTTTGTGTTTTAAATATTAACTTGCAGTTCTA 28276 30 100.0 35 .............................. ACAATAATCTGATTAAATGCATGGCGTGTTTGTTT 28341 30 100.0 34 .............................. TCCCAATGTGCCAATTAGAGTTGGTATAAGTGGA 28405 30 100.0 36 .............................. AATGCTTTAAGTGCTGACAAAAGTGGATTTAAATAC 28471 30 100.0 35 .............................. AAGTTGAGAAAAGATATAAAAAATGGAATTCTTAC 28536 30 100.0 36 .............................. GAAGAAATTCCAGAAGAATAAATCGTGCCTATGGGG 28602 30 100.0 36 .............................. AAACAAAAAGATATTAAGGAGGTTTCAAAAGGTACA 28668 30 100.0 36 .............................. ATATGAATAAGCATATGAGAGGATGAAAATAAAATG 28734 30 100.0 36 .............................. TGTGTGAATTTCCCTTTAAATATACATAAAGTCTTC 28800 30 100.0 34 .............................. TCATTCGTTGCTGCGAAAGTAGTATCTCCTTTCA 28864 30 100.0 36 .............................. TTTTCTTTTCTATTAATTCCATGATAATTCCTCCCT 28930 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 14 30 100.0 35 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : ATAAATAATGAGCCTTGGACTAATAAAATGGATATAGATTTATTAAAAAAGAGTATCAATGAGAATTTAATAAAGAAGATAAAAGTTATTCAGGATATAGATGAAATTTTAGAACATGATATGATAAAATCTATAAAATTAAAAAATAGAATGCCTATAGGATGTAAATACAAACAAATCAAACTATTGGGGAATAAATTTGAAATAGAAATTAAAGATGATGATATATCGCAATTCATGGCAAATATAGCTGTGGCAGTAGGAATTTTAGAAAAAAATTCTCTTGGTTATGGTTATTGTTTATACAAAAGTAAGTAAATTATTTTCCCAACCGATTTAAAAATTAAAACCAGCTATAATCCTTAATTTTACTGGTTTTGATATATGTTTAAGTTTCAAAAATGGCATTACTAAAATCGGTTGGGAAAAATATAATAAAAGTGTTTATTTTCAATAGCTTTAGGAGTATAATAAAAACAAGGAATGGCTATTTCCCTATG # Right flank : TTTTCTCTAATTAAAAATGGTCTTATGTCAATATCATGGACACGAAAAGTCAAACTTTTTTATGCTACACTTCTAGCTAATAATTCACATTGAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 1365-351 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAMZJ010000057.1 Clostridium botulinum D/C strain IZSVe-TV_5262_6_14 NODE_57_length_14271_cov_35.4721_ID_8252, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 1364 29 100.0 36 ............................. ACGGATGATTTGGCGGTGGTGTTGCTCTAAGTCTAT 1299 29 100.0 36 ............................. TTATTCTTCGCCCTCCTTAATAAATACAAAAGGAAA 1234 29 100.0 37 ............................. AAAGGTAGTTTAAGGCTTAGTGATAATGTACTACTTA 1168 29 100.0 39 ............................. GGGTGTTTTAAAGACAGATATTTTAAAATGGGTGCGTGT 1100 29 100.0 37 ............................. TTGCTTTCGCTTCACATCCGCCATATTCTTCTAAAAA 1034 29 100.0 37 ............................. GAATTTGTTACGTGTGAAAAGTATTATTATTTTATAT 968 29 100.0 36 ............................. TTTTGAGATTTAGCTGCTATAAAACCTAGTGCAATT 903 29 100.0 37 ............................. TTTTTTATCCCTCCAACATTATAATTCTTTTACTATT 837 29 100.0 36 ............................. TTATTTCTCTTAATTTCATTTCTTTTAACATTTTAA 772 29 100.0 37 ............................. TCATGCAAAACTTCACATTGATATACTTTCGCTCTAA 706 29 100.0 37 ............................. TCTAATACGTCTTTTGCTATTTGTAATTGCTCGTCCA 640 29 100.0 37 ............................. CGGTATCGGGATACATTTTTTTTAGTATCTTACATAT 574 29 100.0 36 ............................. CCAATTACTTGAGATATATTTTTGAAAATAGCTTTT 509 29 100.0 36 ............................. TACAGAATAGTATATAATTTCTTTCATTACTTTTTT 444 29 100.0 36 ............................. CTAAAACTTGCTATATATTGCATTCTGTACTTCACC 379 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================= ================== 16 29 100.0 37 GTTTTATATTAACTATGTGATATGTAAAT # Left flank : ATTGAAGATGAAAAATATAAACCTTTAAAGGCATGGTGGTAATTGATGTTTGTTATACTAACATATGACATTGAGGAAAAAAGAATAAATAGAGTAAGAAAATTATTGAAAAAATATTTAATATGGACTCAAAATTCAGTATTTGAAGGAGAGATTACAGAAGGGAAATTGCATAAGTGTTTATCTGAGATAAATAAACACATTGACAAAAAAACAGATTCAATATACATTTATAGAGTTAAGATGAGCAAAAATATAACGAAAGACGTAATAGGTATTGAAAAAAGTTTCGATGAACTATTTTTGTAAATACAATTTGCAGTATTGCAAACAAATGTTCTCATTGCCTTAAAGCCTTGACATATCTAGCATAAAGGGTATTATTTAAGAAAAATCCAAAACACTACTTAAGGTTTACTGCAAAATTGCTTAAATTAGAGTTATAGCCGTTTGGTTCAAGGCTAGTAGTATCAATAGGTTCAGGTGTTTTGTATTTTAGG # Right flank : TTCATTTAAATCACCTCCCAATAATATTAATTATTAACAGTTTTATGGTTCTTTCCAATGTTTGTTGAGTAAATATTTAATTTATGATAAAATTACTTATAATTTGATAATACTAAGGAGTTTTTTATGGATGAATTTATAAAATTATTGGATGAAAATCTTGATTACATTAGTCATAAAATTATAGATGATACTTTTTATATACAAGATCAAATAATGATGTTTTAAAGTGGTTAAAGAGTTATCCTAACATTAAAGTAGTTTCTAGAGATGCTTCTATTACATATAAAAATGCTATTTCTAAAGCTCATCCATCTGCGATGCAGATTAGTGATAGATTTCATATGCTTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGATATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.76%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 896-537 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAMZJ010000075.1 Clostridium botulinum D/C strain IZSVe-TV_5262_6_14 NODE_75_length_5736_cov_43.3456_ID_8288, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 895 29 100.0 36 ............................. GATTTTAATTTTAGTAATGTCGTTAGTATATGATTA 830 29 96.6 36 .........A................... AAATCAAATGGAGGGACAAGGATGGTATGGTTGTTA 765 29 100.0 40 ............................. TTTTCTAAGACAACGTTGAACCATAAATACCCGATATATC 696 29 100.0 36 ............................. TCTACAATAAGACTAAATGCTATTCCAACAACTAAA 631 29 100.0 37 ............................. GAAGGTACTGGTGCTTTATATAAAGATACTGCTTTAT 565 29 96.6 0 ................C............ | ========== ====== ====== ====== ============================= ======================================== ================== 6 29 98.9 37 GTATTAATAGAACTATGTTAGTTATAAAT # Left flank : AGGTTAGTTTTAATCATTTACTAGCGTTAATGATATTAGCATAGGAGAAATATTTGATAATATTTTTGAAAGTGGTGATTTCATTGATTGGATATGAAAGCTTATATAATGAAGACTATTTGCAAATAGGAAAAGGGAAGTAGTTTAGAGTAAAAATGTACATAAATACTTATTTTAATATATATATACAAATATAGAAAAAATTTAACAATAATATTGAAAAATAATTCTTAAATTACATAATTATAGTATAATAATAAAATAGAAGGGAGATGAAGATAATGGAATTCAAAAAATTAGTATTAACATCAAAAATGGCTCATTTTAAAAATGGAATTAATGGAAAAAATCAAAATACTTTTAGAGTTCCTCCCATATCAACCATAGTTGGTATATTAAAAAACATCTATGGCAAAGACATTAAAGATTTTATATTTGGATACACCTGCAAATATGATGGTATTTTTAAAGATGATAGTCAGGCATAATATGTTCTATTT # Right flank : CATAGAAAAACCTTCTTGTAATATTTTTAGTTCTGTTAAGTTATATGAACATTGATTCCTCTCAACCTATTGAAATATAATAGATTTTTCACAAATATATTACCTCCCAGAAAGGAGAGAGAAATCAATGAACAAAGCTAATAAAGAAATCATTTGTTCTGGTTGTTGCAGCCATAATCTTTTTAGGTTTGGAAAAGACAAAGAAGGAATGATCACTTTCTTACATTCCCATAGTAGCACATATATATATTCACGACTTTAGTTCAATAATTAATTACTAAACATTTATTATAAGTATCATTGGTATTGTAACTTAATAGGTCATATAACAAAGATATATATTAATATATCTTGAATATATATTAATATATTGGTAAATAAAGGAGAGAAGATATGAGGAAAGTAACGAATATATTGACATCATTAAATTTGTTTATTTTTTCCATATTAATTTTAATACTATAATAGTGCATTTTAAATTGAATAATTTTACAGTTAAA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATAGAACTATGTTAGTTATAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.60,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //