Array 1 188751-180752 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH597761.1 Metallosphaera yellowstonensis MK1 MetMK1scaffold_10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ============================================ ================== 188750 24 100.0 37 ........................ CTACCCATGGGACCGCCACCAACATTACCTATGGTAA 188689 24 100.0 39 ........................ TAGTCACTATCCATACAGACAATTCCACCGTTGTCATTA 188626 24 100.0 40 ........................ GAAGAAGGCTGAGGAGGAATGAACATCAGGAGCTTATATC 188562 24 100.0 39 ........................ AAACACGAACTTACCCGCCGATAAGGCACCGCGTTTGAT 188499 24 100.0 36 ........................ ATATTTACAGTGATTAGATCGGAAGAAGAAGTAGAA 188439 24 100.0 41 ........................ TGCCCTCCTTACCTACCTCCCGGACTTCCTTACCTTCCCGA 188374 24 100.0 40 ........................ GTTTCATCGCTGGACTAACTTGTGCTTCTTTGACTTTTTC 188310 24 100.0 39 ........................ ATAGGTCGCCGTTCTTAGGATCTACCGTGAGAACGCCTT 188247 24 100.0 40 ........................ TTTTAATAATTCAGGATGATTCTCTTTTAGCCATCTTTTC 188183 24 100.0 40 ........................ ACTATCACCACTATATCATCAGCTTTCATATTGAATCACA 188119 24 100.0 42 ........................ CTACGTGTTCATGTCCCTCCGTTTGATAAGGGAAGATCTTCT 188053 24 100.0 39 ........................ ATACTATACTTCGCACATAACTCCATTAGCATCTTATTC 187990 24 100.0 42 ........................ TATCATGAAAATGGGGGCGAATGGGTCAGGCTTATAAACTGG 187924 24 100.0 40 ........................ CCACTATCAATGGGAGGAACTCAGCATTTCGTGTTATATC 187860 24 100.0 39 ........................ ATGCAAGTTTAAGTGGAACACCAACTCCATTACAATTTC 187797 24 100.0 40 ........................ GATATCAGGGGTACGCTAATCAAGATCGACCTCTCTACGA 187733 24 100.0 43 ........................ CTTATATGTATTGTGAACTTCTCCGACAAGGGAAAGACTTCGT 187666 24 100.0 40 ........................ ATCATTTCGCCTCCTTCACCAATAATCAGTCCACCGTCTC 187602 24 100.0 36 ........................ TAACAGGGATGTGTTAAACACAGTAAAAAAGGCAAA 187542 24 100.0 40 ........................ TTGAATTTCGTAATTTTGCTTAAACACTATATAGAAATAC 187478 24 100.0 39 ........................ ATGTTAGAATCCACCACCCTACCCACCACATCTACTACT 187415 24 100.0 41 ........................ ACAACAAAATACCTAGAAGGGCGAGTATTGTCGTTCGCTTT 187350 24 100.0 39 ........................ AAAATAAAGAAAGCGACTAGAATTCATGATCCAGGAGTA 187287 24 100.0 39 ........................ TTTTCCGCAAGCTGTGCTACCAGATTTGCTATCATACTT 187224 24 100.0 38 ........................ AAATCCCCGCAAATATGACACTCCCCGCGATCGACCTG 187162 24 100.0 39 ........................ TAACCAGACGGCCAGCGTTTCGCTAGGCAATTCAGTGAT 187099 24 100.0 42 ........................ CGTTGACGCTGACCTCCCACATGATTTTTTCGTTATCAGGAT 187033 24 100.0 42 ........................ ACTGATCTTATGCCGTATGGAATAGGCCTCGAGTAGTTCAAT 186967 24 100.0 40 ........................ CCACCATTACCACCATTACCACCGCAGTAGTATCCACCGC 186903 24 100.0 39 ........................ TTTTCAGGTATCTTAGGGATGTTAAGGCCCACACGGGCC 186840 24 100.0 37 ........................ GAATACGCTCCTAGATGAGCACGACATAACCTACAGG 186779 24 100.0 38 ........................ CAAGTTTGGCGAAGTGCCTGTCAACGTGATTGTATACG 186717 24 100.0 36 ........................ TTTTCTCATATTTATCGCCTCAAACATTGAACTCTT 186657 24 100.0 37 ........................ GAGGGAGTCATCTTCTCAGGGGACGATGAAAGGTTAC 186596 24 100.0 39 ........................ AGGATCTTCAACTCTCCCCTTCACGATACCGGACATCGA 186533 24 100.0 36 ........................ CATACAACAGCCTTCACAATCAATTTATGTTAACTC 186473 24 100.0 40 ........................ AGTCCGATCAGGCCTTGCATCTAGTATCTCCTTTATTTGT 186409 24 100.0 39 ........................ CTGGTCACTATAGCAAGGATAATAGACCAGGAGGATCCA 186346 24 100.0 36 ........................ ACACCATAAACTATTCCAGGATTTTGTCCTCTTCGG 186286 24 100.0 40 ........................ GAAGTTAGCGGGGAACATGGCAGACATCTATAAGGACTTA 186222 24 100.0 40 ........................ TGAGGAAACCAGCTCATCTTATAAGATAGGAAAAAATCAA 186158 24 100.0 41 ........................ GTTTTTCAACAATTTACCGTTGTCATTGAAGGCCAAATAGC 186093 24 100.0 38 ........................ TCCATCAGCACGTAAGAAGGTGAGTGTCTGGAGACTGG 186031 24 100.0 38 ........................ CGGCCTATCACGACTTTCCCCCCTCCTCCTCCTAGACG 185969 24 100.0 40 ........................ TTATTTTCAGTAATAGTATCACCAAGCATGGAGCATTATT 185905 24 100.0 36 ........................ TTCTTTATCTATCTTGTTCACTGTAATTCCTATCGG 185845 24 100.0 37 ........................ ACCGGCATCTTTGACCTTCCACCATGAGCCTATTGAT 185784 24 100.0 40 ........................ TATTTTTATTGTTGAATCGTGTCTTTACTCTAGAGACCAG 185720 24 100.0 38 ........................ TGTACGGTCTCGGCATTTTTTCTCACCTCTTACCTTAG 185658 24 100.0 39 ........................ CTACCATTTGCGTGATGGCTCTTCTGATGGCCTCGCTCC 185595 24 100.0 41 ........................ AAGAAATAACTGTTCCCCCATCGGACACTAGATATATCTCG 185530 24 100.0 40 ........................ CGTACTTGAAACCCATCTTATATGGGGGGGCTATAGGTGC 185466 24 100.0 43 ........................ CGCGAACGGGTTCAGCCCCGCTATGTTGGAAAAACTTCCTTCA 185399 24 100.0 38 ........................ TAGCTTTTGAAGAATTACACGAAGTTGCAAGTAACTGG 185337 24 100.0 39 ........................ GTGACATCGCTACCGATGCTTTTCGCCAGAGAATTCCGA 185274 24 100.0 38 ........................ TTGGAGGAAGACGGGGGCATTACCGTTGTTTACAATTT 185212 24 100.0 42 ........................ TCATCAACTTCTCGATACGGTTGACCTCACCCTGGTCTGAAG 185146 24 100.0 41 ........................ GCTCCGAGTGTGTGCTGAGTTCGTTAGGTGACTCTATCTCT 185081 24 100.0 40 ........................ TTAAGAAAAGACTCACAGCTAACTCTACGCCTCCTATAAT 185017 24 100.0 39 ........................ CTTGAGGCTTTGTCTGGGTTCAAAGGAGGGGATTCCTTC 184954 24 100.0 41 ........................ CCGGGCCAGGGCCCGCTTCCTTTAATTCTCAAACTTACTCT 184889 24 100.0 40 ........................ ACTTCTCATATTGAGTGTAATCGATGAGAGCCACTGATGG 184825 24 100.0 38 ........................ AACGGGCTTCCGAGTGCAGTCGTCATGCCTTACGTGAT 184763 24 100.0 39 ........................ GCGAAAAGTTTCTGCGAGGTGAATCGTGACACGATTTCT 184700 24 100.0 44 ........................ CTTAGAGCCACTACTATTGCCCGTACCGCCGGCACCACCTGCAC 184632 24 100.0 38 ........................ TGAGTCTTAGGGAGCTAATCACTGTTCAGAATGAAAAC 184570 24 100.0 37 ........................ AGAAGAGCAATTGAAATATTTCTATATGTTCTTGATA 184509 24 100.0 40 ........................ CAATTCCGCTTCGCTGGTCTATCTTATTCTTCTGGCCTGT 184445 24 100.0 39 ........................ ATAAGTAATGCGATAAGTCCCCAATCCATACCCTTTTGT 184382 24 100.0 37 ........................ TTATGATCCTCATTCTATTAACACCTCCTCATCCTGA 184321 24 100.0 41 ........................ TTGAATCGATCAGTGGGTTCAAGGGAGGCGATCGATTCTAC 184256 24 100.0 40 ........................ CAGGCGTCGCCGACTTCATCGGACTACTAATATCGTTCGC 184192 24 100.0 40 ........................ AGTATTGCAAGTATATGTCTATGTACTCGAACGACCCGAA 184128 24 100.0 40 ........................ TGGATTCGATACATGCCCTTCGATTATCGTACCTGGCGAT 184064 24 100.0 41 ........................ GACGCTTCGAGTGCTTTATAAATCGTTTCACCCCTCATCTT 183999 24 100.0 39 ........................ TCCTACACCCCTAAAGCCCTGGTCAACGCAATAGTTCCT 183936 24 100.0 39 ........................ TCCTTAGTTGTACCCTGAAACTCCCTAGGCTCCAGGAGC 183873 24 95.8 39 ..........A............. ACGTTTAAATTGATACTGGGGAGGAGCATATTGGGAGGG 183810 24 100.0 41 ........................ ACTCTTTTATTATCTGAACATTGCCGTCCTCGTCTAACCGA 183745 24 100.0 37 ........................ AGCATACCGTCTGTGAACGTCACCGTAACTCCTTCAT 183684 24 100.0 41 ........................ GCGTTTAATGCATAGACATAAGAAGTTGTCCCGCTGACTAT 183619 24 100.0 41 ........................ CGGTTTTAGGGTCTCTCATGAACGCACTTATCTGGTCTCCG 183554 24 100.0 37 ........................ TTCTGTATTACGGTCTGGTATGGGATTTGCGTACTTT 183493 24 100.0 40 ........................ TGTATTACCGTGAGGACGGGCGAGTTCACGCATTACTCCT 183429 24 100.0 40 ........................ GAATACGTTAATCAGCCTGGTCTGTGTTGAGTAATGTTCA 183365 24 100.0 41 ........................ TGGTAAAAGGCCGACTTGATCGCTATCAACGTCAACAATTT 183300 24 100.0 37 ........................ CACCTTGGTCTGAAGATAGTTGAGACTTCTTGAAGGA 183239 24 100.0 36 ........................ GAATTATTAGGGTTTGTCTCGGTATTACGAAGTGCC 183179 24 100.0 39 ........................ ACCCATGTTAGGCTTCAAAGGGGGTGACGGGATATTCAA 183116 24 100.0 37 ........................ AGTAATGTCCCCAGCCCGGGGACGAAGGAGCCGACTA 183055 24 100.0 38 ........................ ACTGATAGTAGCGCAGTGGCGGACACGACATATATTCC 182993 24 100.0 41 ........................ GTAGTCTATGCCCTTCAAAAAGACCAAGTGATAGGTGTCCT 182928 24 100.0 39 ........................ CCATATACTGGTAAAGTAGCGTCAGGAAGAAGTTGTGGA 182865 24 100.0 38 ........................ AGCTAGAGGAGGCTGGAGTTCTAGAACATATCCTCAGC 182803 24 100.0 41 ........................ TTTTTGCCTCCTCTTCATCTTCCGCCTGCACGTATGCAAAA 182738 24 100.0 39 ........................ TTTCCTCTTGTTTCTTGGCCTCCAGCAGCGCCAGCTGTG 182675 24 100.0 44 ........................ GGTACCTGCACTTCCACCGTTTACCGTTGCCCCTAACGGGTTCG 182607 24 100.0 38 ........................ CTGTTGTATACATCGATTATCGTCCACTCTTGATTGAC 182545 24 100.0 39 ........................ TTATTCGTTGCTTGCTTCGAACATTAAGGAATTATACAT 182482 24 100.0 40 ........................ ATGGTGGAGATACGATTGGAGACGGTGGTGGACTGATTAT 182418 24 100.0 40 ........................ ATAGCACTACGCCGTCTTCTTTGCACCTGTATATTACTTG 182354 24 100.0 40 ........................ AGCTTATTATTACTAATACTAGTTGGACAAAATTAGTAGA 182290 24 100.0 40 ........................ TCACGTGCTATGCCGATATCGTGTAATAGTCCTTGCGTAT 182226 24 95.8 37 ..........T............. TCTTTCCTTACCACGCCTTTCTCCTCTAGTATCTCAA 182165 24 100.0 42 ........................ TCTTGTGATATAGTGTTCCTTTGCGAGTCGACTTAAGATTAC 182099 24 100.0 39 ........................ ATGAAAATTCTAGTATTTAACGGTACAAATCCACGGACC 182036 24 100.0 40 ........................ TTGTCAATGGATCTTCCCATCCTACACCAAAGGGGCTCCT 181972 24 100.0 38 ........................ TGATACAGAGTAACTCTATGAGGTTCTCCCGGCCTTGA 181910 24 100.0 40 ........................ ACGAGCGTAAACGCTAAATTAAACTCCTGACTTTATCTTT 181846 24 95.8 39 ......................T. ACTAGTCCTGCGGGTATATCGTATCTTCAAGGCACATTT 181783 24 100.0 40 ........................ GTACGCATCAACGCTTAGGCTTCACTTATTTAACGCTTAT 181719 24 100.0 39 ........................ CTTTCTCTATCCCACGCCCTAAAACACAATATAAACCTG 181656 24 100.0 40 ........................ AACAGATTTTTCCTAGTTTGATTATTATTGGTTTTATCTC 181592 24 95.8 37 .........T.............. CCATTATTGCCACCATATGTACCCCCTGCACCACCAC 181531 24 100.0 40 ........................ CTATTACTTTCTTCTCAACCTCATCCAGTTCTCTCCCTGT 181467 24 100.0 39 ........................ TAAATTGAGGTCATTCACGCTGTCGTGGTAGAACGAACT 181404 24 100.0 38 ........................ AAATCGGTGAGATCGAATCCAGTTTTTTCTAGTTCCTC 181342 24 100.0 39 ........................ GGAGTCCATGGGGCCGAACACGATCCACGTTCTTAATCT 181279 24 100.0 39 ........................ TAACCTCCCCCTAACACCGTTTCCGGAGATTATCGGCAC 181216 24 100.0 41 ........................ TATTGGGGCGACCTTTGTCACTCCCCTCATCGAGACCTTGA 181151 24 100.0 37 ........................ TCAATTATTGCCGAACTGAGGCTAATTTTAGTATCGA 181090 24 100.0 40 ........................ ATGAGGGTGATAGAGGGTTATCTCATCTATCCAATCCCCG 181026 24 100.0 36 ........................ GCTAACACGCCGGCTAGCACGACCACAAAATCTAGA 180966 24 100.0 41 ........................ AAACGCATTCTCTAGATGGGGGGGTGATTTTCCCTATTTGG 180901 24 95.8 39 .G...................... ATCTTAACATGATAAAGGGACCTATTAAGAGGTCATATT 180838 24 95.8 39 ..........A............. AAACTGTTCGTTCGCCAAGTCTTTGGAGAGTTCTATCTC 180775 24 91.7 0 .........AA............. | ========== ====== ====== ====== ======================== ============================================ ================== 127 24 99.7 39 GTTGATCTTGGATAGAATTGAAAG # Left flank : TAAGCTACCTCGTGCATGGACAGTCCCAAGTAGGACCTTGGCCTCACTGGAGGGCGGTGGTATGACCATCCCCTGAGCTCCTCCGGTACTGGGTCGGAGGACCTCCAGCTGTGGAGCTTTCTGAGGCTCCTGAACATCTCAGCCTGCGAGAGCATGGGTATGATCAAGACGCCCAAAATATTATCCATTATTGTCGAGAGTTACGGGTGTCCTCCTAAGTTTTGGGAATAATGTGATTATATTTTATTAATTGAAATTATTTAGTCGGGAAGACGTGAAACGTTCCGTTTGGATGTCCATATCGTCTCTATATATAGTATGAACAATTACATTAATAGAGAAAACCTGAAATTTCTTGGGAACGGGATATATGGAAAATATCTATGATACTTACAGAATTTTGTACTGAAAGGAGTTGGGAGGTGATACGCTTTGAAGATAGGAAAAATTTATAAGGTAGTAGGAGTACAACATTAAAAGTAAAAGTATATAAGTTTTCA # Right flank : CGACTTCGAGTATATCGACGAAATACCAGCCCCGACAGGGGACCTCCAGTCCCTCCACGCGTAGTCCAGTTCTCCCAACGCCCCCAGCAGGTTTGAGTAGTCCAACCCGAACGTCTCAGCAGCATTCCTCACGCTGGCCCTCCGTCAGGACCATGAGGACTAGTGCCGGTTAACCTTCCTGCTCCTCCCCTTCCCCCTCACCACGCCCAACCTGTTGACCTCCCTGACCGGCCTCTCCCTAGCGAACTCGATCTGTCCCTTTCCGCACCTTTTCAGCCGGACGACGTCGAAAAACTTCTCACAATACCGACTTTCCGGTCCTCCCTAAGATTCCCATACTTGCTGCTCTGACAGACTTAAAAACGTAACACTGGACTCGTTTAGGCCTATTTGTTGTCCCTCGCCTTAACCACTATCTCCCCCAGCTTTGTCAGGAATATCCCTGCGCTCTTACCTCTCTGGGTCAAGAGCCCGTCACCCTTCATCTCAGTGACGTAGTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGATCTTGGATAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA // Array 2 215878-212480 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH597761.1 Metallosphaera yellowstonensis MK1 MetMK1scaffold_10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ================================================ ================== 215877 25 100.0 42 ......................... GTAAAATGTCCTCTATAAAGGATTACGAAAAAAATATATATA 215810 25 100.0 35 ......................... TTTATCCTCTTTAAAGTGACAGTATTACCGTTAAT 215750 25 100.0 42 ......................... GGATATATTTCATCTCGGCGGCCGTGGAGTCGTTTCAGCCGG 215683 25 100.0 39 ......................... CTATAGGCCAATGAGAAAAACGGAAGGTGGTACTTTTTC 215619 25 100.0 44 ......................... CCCAATTTACTGAGACCGCTGGAAGTGGTGGAAGTGTATCATGG 215550 25 100.0 41 ......................... GGAGGATATGGATTTGTTTGGCTTGTTTTAGAAGTGTGGAT 215484 25 100.0 41 ......................... AACGTTAACCTGAACGTTAACAACATCATTAAGCAAAACAA 215418 25 100.0 42 ......................... TGTAAGCTCAAGTTTTGATCAACCTCGTGTCCAAGTAGTCGT 215351 25 100.0 42 ......................... GGATTATCTTGTCCCTAAGTAACTCCTTTGCTATCTTGTATA 215284 25 100.0 42 ......................... ACCCACTGGTTCAATTTTCTCACAATAGAGAAAATCGGCATG 215217 25 100.0 37 ......................... TTCTAAAACCGTCGTCAGTATATTTCAGTGGATAAAG 215155 25 100.0 48 ......................... ATCCTTTGCACTTAAAACGTTGCACAAGGTCTTCAGACGGCGTTTCCT 215082 25 100.0 39 ......................... ATCCTTTGCACTAATTTGATTCTGCTCTTTCCTTGTGTT 215018 25 100.0 42 ......................... TTGTAGTTGTATTTCGTCGTTCGCGATTGATCCTAGATTCGT 214951 25 96.0 42 ................G........ TGTAATAGCCTCAAAAGTCTCTGGTGATATCTCGAAACCCAA 214884 25 100.0 40 ......................... CTTGATGAAGTACAATACATTCTTTAGAATACTTATCTTG 214819 25 100.0 39 ......................... CCTGTTAAATGCCAATGGAAATGCTCGCAGTTCTCTAGT 214755 25 100.0 43 ......................... TACGCCCTCTCCGCAATCCTATCCATGTCAAGTTTGTCAACGT 214687 25 100.0 40 ......................... ATGAACTCGTTCTCATTTGTTTGTTGTGGATTTGTTTTGT 214622 25 100.0 41 ......................... ACGTTGCATCCACAACAACGTTTAACCGACTTTTTAACTTT 214556 25 100.0 40 ......................... TTCTTAACTAAGAACATTGCATCAACAGCGATTGGAATAG 214491 25 100.0 39 ......................... TCGTTTGTTCTGATGGAACGAATTTGTATATTAATTCGT 214427 25 100.0 36 ......................... TTCAGCGCCTTATAAGCCTCCGATAAACCCATAAGA 214366 25 100.0 35 ......................... TTGAATGTTCTTTGCTTCTTCGATCGAAAGGCTTG 214306 25 100.0 41 ......................... AAAACCGATCTCAGATCGTTGGTTTGAGTGTCAATCTGTGT 214240 25 100.0 41 ......................... GTGGGTTAGCGGTAGGTGGTCTCGGTAGGCTAATGAGTCTC 214174 25 100.0 39 ......................... TTGTCTACGGGGAGCCGGGGAGCGGTAAGACTAGTTACG 214110 25 100.0 35 ......................... CACTTACCGAGTGGCAAGCAGTATCTTCTACAAGT 214050 25 100.0 40 ......................... TCACTGAGGCCTATAGTTTCGACTTCCGTCAGAAGGGTGT 213985 25 100.0 41 ......................... TATGGCAAACCGCTCACATATATCCCACCATAGCTTAATAG 213919 25 100.0 42 ......................... AGTTATCCGAAACAATGTCTGCCCGCATTCCGGGCAGAACTG 213852 25 100.0 36 ......................... CCATATAACGCGTACGCAAGCCACAACGCTAATGAA 213791 25 100.0 41 ......................... TCACAGATCTCATGAAGGAAATTGATTGCGTAATCCTCTAG 213725 25 100.0 37 ......................... TTTCTTCTTTGAATTGTCAATCTTTCTCCTTCTAAAC 213663 25 100.0 40 ......................... AGAAAATAGATGGCAAGTTTTACGCTTACATTCCCTTCGA 213598 25 100.0 39 ......................... TACACACAGAATTCGGCTATCTACATTGGTAAGAGGTAT 213534 25 96.0 47 ..........A.............. GTAAAGTGGGAAAGAAGTTAGATGGATTCTTCTCATTACTAAAAAGT 213462 25 100.0 36 ......................... CGTTGAGAAAATACTCAAGGGTGAATTTGCTTACAA 213401 25 100.0 39 ......................... GCCAGAGCTGAAACGTCAGCGACGTCGTTGAAGAACTGC 213337 25 100.0 37 ......................... TAGCTTACATAGCCAGTGGGACTACCAGTAATTATAT 213275 25 100.0 39 ......................... ATGAAATCTCCTACTGAGAACGTTATCTTCCCGATTACC 213211 25 100.0 39 ......................... GCAACTCTTTCGAGTTGCTTGCAAATATATCTTATCTCT 213147 25 100.0 39 ......................... TTTCATAGTAAACGACAACTAAGTCCTCTTCTGGTCCTC 213083 25 100.0 39 ......................... TGATAACTTAATGAAATTTTTTGAACTTGTCCATACTTT 213019 25 100.0 36 ......................... GTCAATGCGAGAAGTAGATCACGATCTTGGATCATC 212958 25 100.0 43 ......................... ATAAGCGAATGTCTGCATGTCCCTTCTCTTCCTCATCAGTATC 212890 25 96.0 41 ........T................ ATAAAGTAATCTTAACCCTGCAAACTTGTTGAGTACTCCGT 212824 25 100.0 39 ......................... ACGAAAATGGGGTGGCTCCACTCTCTGTAGTCGAAGCTC 212760 25 100.0 42 ......................... TCGTCTAACTTGTCTGGATAGCATCCGTTCCCAACTGGTTCC 212693 25 100.0 39 ......................... ATGATTTGTTTATTCGTAAACGGTGAATTCTCGAATAAC 212629 25 100.0 38 ......................... TAAACATGGTAGGGTGTCACATGCTCAAATTCGAGGAG 212566 25 100.0 37 ......................... TTCATCTGTCCATCATCATTAAGTCTGATGATCTTGA 212504 25 100.0 0 ......................... | ========== ====== ====== ====== ========================= ================================================ ================== 53 25 99.8 40 GTTTCATCCTCAAAGGAATTGAAAG # Left flank : CCCCAAAACTGCGAACCCTGTCAAGGGAGGTCAAGTACCTTGAGCGGACTTAGGACCTGAACGCCTAGTAGCTAAAGGATCCAGCAGCTTCACAACACGGGGGAGCAAACCCGTAATACAGCAGTTATTAGATTCTGCCTTGACTTCAGGGCTACGCAACGAGAAATCCCATAACTGCTGCCGTAATACCTCCTGACCTTCCCACCCTACTCCTCCCTGCTCGAACTTAAGAGTTCGATCACCTCCACTACCCTGCGAGAAGTTGTGGCGAGATTTAGGGAAACTGAGGTTCGACTCTCCTTGCGTACGAAACGAAAATCGTGAGAAAAATTAAACGTATATAAACCTACCTCTCTCTTTCAATGTGTGTAAGAGACCATGCGAACAGGACGACGTAACGCCACCGTGAGGTCCGAGTTCGCATGACAAGTGGAGGGAGTGGTGAGAAATATTTATAAGTTTATCCTCTAGAGTATAAAAGAGAGAATAAAAGTAGATCA # Right flank : CGATATGGTTTATTGCATATAAGACCTGGTGACTACCGAGTTTTACCCTACTTCACGGTAGACCCAAAATCGTATTATGAAAAATAACTCCAGCAGGATAATATCGACTCATAGCGAATAACAGGATTTATAAGGGTATTAAGAATTCAGTTGAAGAAAGGTTTAAGGTGAGGGAGATGTGGTATTACCACGTGTGAGAGCGAGATGATAATACACCATCTCCCTCACCAAAACAACGTTCAACAAATAGGATATAAATTACTTTCCATGCTGAACTTCAAGGGAAAGAGAGGGGAAGAGGTGGCGAGAACCCTCATCTCAGCGTGTTTATGGAACTATTCAGTAGAGAACAAGTCGAGGGCGTACGGCGTGTCCTCACAGACCGTGAGGAATTACGTGGAGGAGCAAGGGGTGGAAGTGGTGGAAAAGCTGTTGGAACAAGTGAGGAAAATGTCCTTGGAGGTACTGAAGGGGCAATTCAGGACTCCTTTGCGAATTGT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCATCCTCAAAGGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.20,-2.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA // Array 3 221207-224287 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH597761.1 Metallosphaera yellowstonensis MK1 MetMK1scaffold_10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ================================================== ================== 221207 25 100.0 36 ......................... GCAATGGCGCCCGGAGGGTTTGGCGGTAGCGGAAAT 221268 25 100.0 41 ......................... ACAATCATAACGACGTATTTCATAAGGAAGATAACGCATTC 221334 25 100.0 44 ......................... CTAAGGAGAGCGGATTTACGAGGAGCTACATGGCTAACGACAAG 221403 25 100.0 36 ......................... GTAGTTAAACCAGCGATATACATAGTTGTTAACGTC 221464 25 100.0 36 ......................... ATAAATTAAATTCGTCATATACATCGACGTAATTGA 221525 25 100.0 41 ......................... TTTGATTTATTTTTTGGGCTTGGTTTACCTTCATTTTTCAC 221591 25 100.0 40 ......................... ATTCTTTATACTGGGCCGTCTCGTACGGGCGACCCAGGAG 221656 25 100.0 41 ......................... TTTCCATTCTTCATCAGCATTCTCCTCATCGTCCTCCTCTT 221722 25 100.0 38 ......................... CAGTAGGTATCTCGTCGGTACTGTGATGGCGACAGTTG 221785 25 100.0 36 ......................... TAAAAAAGTGGCTTGTGTGTGTGTTAAGCGCACAAG 221846 25 100.0 42 ......................... ACCCTTAATGCGGTGTACGATGCCTTCATTGACGCCTTGATT 221913 25 100.0 40 ......................... TATAAATAGCTACTACTCCATCGTGTGTTCGATAAACCTC 221978 25 100.0 42 ......................... TTTTCTATGTCGTTGATGACGAGGAATATCAATACGTTATAT 222045 25 100.0 40 ......................... TCTCCTCACTAACCAATTCATCCAGTTGTACCTCGGCTTT 222110 25 100.0 41 ......................... ATCAAAAATGTCACCAATGTCGTCTGGATTATCTTTTATTT 222176 25 100.0 46 ......................... AGCTTAACGTGACGCGTCGTTAACGTAATTGCAAAACAACTCGTTA 222247 25 100.0 43 ......................... CTTAGATGTACGTGTTGTTCACAACAACGCATCGGAGTCGCTG 222315 25 100.0 40 ......................... GAACAAGAGAGTTTTCGGCGTTAAACTTAACTTGCTGACC 222380 25 100.0 36 ......................... TTTAAAGTTATATCGTCTCCTTGAAAGACTAGTAAT 222441 25 100.0 37 ......................... TGATGCTTTGCCTTATTGTATACGTTTTCAAGAAAGT 222503 25 100.0 39 ......................... TTAAATATCTCAGCATTTCGTTCACTCCCATGCTATACT 222567 25 100.0 41 ......................... CCGATGTACCTCACATAATCCATATATAGTATAATTCTCAG 222633 25 100.0 41 ......................... AGAAAAGACCCCATCGGTTGGTTCCTTCGACAATCGGGTTT 222699 25 100.0 37 ......................... TCTTCTTCACCCCTGGACTACATCTTGGCCGAATAGC 222761 25 100.0 49 ......................... CTGTTGTTTTACATTGCTTATTGTGTTTGATAGCATCTTCTACTGCCTT 222835 25 100.0 40 ......................... CCATTATCCAAAACTGAATAATAATAAATTCTGTCCCCAT 222900 25 100.0 37 ......................... CTTCTTTATTTACCGTCAGCAATTGACCTGTTTTTAA 222962 25 100.0 41 ......................... CTCGTTCGTAGGGATATCAGTATCGTATCGTCGAACCCTCC 223028 25 100.0 41 ......................... TTGAAATACAGGAATTGGATACAGGATGCCAGATACCAACT 223094 25 100.0 42 ......................... CTTCTCCTCTTGGAGAAGGTTTTTGGGTTTGGATCTGATCGC 223161 25 100.0 42 ......................... CTAGTGGTATGATGACATATTCGTCTTCATTCGGTGATGGCA 223228 25 100.0 36 ......................... TTAAAAAGGCATTACTCGATAATATAAACTCTTGAT 223289 25 100.0 36 ......................... TTATACTCAGCCCCGCTCTCCATATGTGGTAGTATT 223350 25 100.0 44 ......................... TCGTAAGGTAGTGGTACAGAGATCTTAGGTACCCACGTTATAAA 223419 25 100.0 37 ......................... CCTTCTGTTCCCACTCTACCCCTATCATGCTCAGAAA 223481 25 100.0 42 ......................... TCTGTGCGTTATCAAGTAAAATGAGCCATGCATTAGCTCTAT 223548 25 100.0 41 ......................... GGTACACCGCTTTCAAACATCTGTGTGTTGACTGTGAAAGT 223614 25 100.0 41 ......................... AGGTCCTCCGTGATGCGGATGAGTCCCAACGTCAGTTTCTC 223680 25 100.0 36 ......................... CACATAAAGTAGTACTTACTCCGAAAGGCCAAGGAA 223741 25 100.0 40 ......................... CTTCCTGAGCGTTTTCCTCTTCCCCCCCTAGGAGATTTTT 223806 25 100.0 42 ......................... TTTCATATTGCTCATACCGTGTGGGGATAATCCTCACGGTTA 223873 25 100.0 37 ......................... TGCATTACTTGTTCCGGGTGTACACTAAGCTCATTGC 223935 25 100.0 41 ......................... AGGTATGGGTACTGATGTTTTTGGCATTCGATTGGAATGCT 224001 25 100.0 38 ......................... TTTCCCAGTCTCCAACTTCAGTTCCTTTGATACCTTGT 224064 25 96.0 37 ..................C...... TCACTATGAGCACCATTACGTTCTTTTGCCGAATGTA 224126 25 92.0 37 ...............AG........ ATATCTCAGCGTCAAACTCCTCATCGTATGTATCATC 224188 25 92.0 50 ..........G.......C...... ACTGTCCAGTTTCCTAGCTCGATCTGTCCCTTTCCGTGGGGCGACGTTGA 224263 25 96.0 0 ..................C...... | ========== ====== ====== ====== ========================= ================================================== ================== 48 25 99.5 40 GTTTCATCCTCAAAGGAATTGAAAG # Left flank : CCCCAAAACTGCGAACCCTGTCAAGGGAGGTCAAGTACCTTGAGCGGACTTAGGACCTGAACGCCTAGTAGCTAAAGGATCCAGCAGCTTCACAACACGGGGGAGCAAACCCGTAATACAGCAGTTATTAGATTCTGCCTTGACTTCAGGGCTACGCAACGAGAAATCCCATAACTGCTGCCGTAATACCTCCTGACCTTCCCACCCTACTCCTCCCTGCTCGAACTTAAGAGTTCGATCACCTCCACTACCCTGCGAGAAGTTGTGGCGAGATTTAGGGAAACTGAGGTTCGACTCTCCTTGCGTACGAAACGAAAATCGTGAGAAAAATTAAACGTATATAAACCTACCTCTCTCTTTCAATGTGTGTAAGAGACCATGCGAACAGGACGACGTAACGCCACCGTGAGGTCCGAGTTCGCATGACAAGTGGAGGGAGTGGTGAGAAATATTTATAAGTTTATCCTCTAGAGTATAAAAGAGAGAATAAAAGTAGATCA # Right flank : GATAAACGTCGTTAAGTACGCCTCGCCAAACTTTTTTAATTTCGCAGCTGTGTAGAACCCGTGTGCGGGACTTGGAAACTCAGTCTCCAGTTCGAGGACGACGTCACCTCGTTGAGGGCCCTCTCCGACCTCGTGGCTGAGGAGTTCCCCATGGAGGAGGTGGCTGAAGTGTTCCTCTCCAAGTTGAGGGCTCTCATGGATGACCCGACTCAACTGGCGAAGAACAAGGTGGGGGGGATCAAGGACACGGATGGGAGGCCCCTCTTTTACGTGAAGATAACGTCGAAGAAGGGTTTAATGTTCAGCTACGACTCCGAGACTTGTACCGTCTTCATTTGGAGGTTCGGGAACTCGATGACCTGAGTTTCCTCAGCACCAGAGACCTCAACTGTTCGAGCTCTTGAGGGTCCTCCAGAACCAGGAAGTAGTGCCTCCCTTTTCTCCCGGACTTCATGCTAAGTGAAGGGGAGGAGGGGCTTTTAAAAGTGAGGGGCCTCCAG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCATCCTCAAAGGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.20,-2.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : NA //