Array 1 123933-124422 **** Predicted by CRISPRDetect 2.4 *** >NZ_RBCK01000001.1 Streptococcus chosunense strain ChDC B353 KCOM1699_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================== ================== 123933 35 100.0 30 ................................... ACAGACTTATGCTGATATCGGCTATGACTT 123998 35 100.0 30 ................................... TCTAGCTGTGACAACATCTGTTGCATCCCA 124063 35 100.0 30 ................................... CAATCGAGCGACCTACGAACAGGTCTACGG 124128 35 100.0 30 ................................... AGGCTGGTAGCTTTTTCTTACGCTCCAGAA 124193 35 100.0 30 ................................... TTCTTAATCAAACGATATTTGATTGGTGAA 124258 35 100.0 30 ................................... TCTCAGTAGGTAATAAATCCGACTGGGAAA 124323 35 100.0 30 ................................... ATGGTCACATCAATACGATCACCAAATCCA 124388 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ============================== ================== 8 35 100.0 30 GTTTTATCGGTCACAATTTTGGAGACTACAAAAAC # Left flank : CTCTAGGACTTCGTCGCTAATCTACTTTATTTTCCACTTACATTGCGTTGTCACCTTACCTCGATATACTCAAGTATTATCTTTGGTTACGGTTCCTAGCACTGTAAGGTAAAATAAACCAGAATGATCTCCCTTCGGGGAGATTTTTTTGTTTCACTGAAAGTTTCGTACATTCTTCTCCTCGTCGCCTAGTCTATAAACGGTTTATCCAGCAAGACTGGAGCTCTCTGATTTTCAGAGGGCTTTTTGTTTTTATCTGCTTGCTTAGGCCGTGTTCAATTAACAAGATACAAAGGCCGTCAAAAGCACAAAGCAAAAATAGGAAAATTGACGAAGAAACTTCAGTTTCTAGGAGATTTTATCTTTTTTGCCAAGTGCTTAGGCCGTGTTCAATTGAGCATGTCTTGATAAAGAAGCTACTCCATTGGGTAGCTTTTTTGTATGGATTTTATCCCGAGCTCAAATCAGCTCTCTGATTTTCAGAGGGCTTTTTTATTGAG # Right flank : CCTCAAATGGTATCAGCTAATTACACCATAAGGGTGCGTAGCTACTCGGCTTGAAAAGCCGAGTAGCTGTCTGCAAGCCCCTTCGGAGAGCCCACACTTTACGAAGTAAAGTATAGTATGTTATACTTTACATGGAAGTAGTCACCGAATTCCAGTTAGAAATTACTTTGTAACTACGTTTTGAGGAGGAGTAAAATGCTTTCCTATGTTCGACATTACCCACTAGCGATAGCTAAATTAATGTGTCTGTGCTCTCCTAAAATCTGCTGATTTATTACTGACTAATACAGGAGGTTTTTATGGGACAGACAATCATATCTGCTATTGGTGTTTATATTTCCACCAGTATCGATTATTTAATTATTTTATTTATTTTATTTGCACAGCTATCACAGAATAAACAAAAATGGCATATTTATGCGGGGCAATATCTAGGCACAGGCTTACTTGTAGGGGCGAGTTTAGTTGCTGCTTATGTCGTTAATTTCGTGCCTGAAGAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCGGTCACAATTTTGGAGACTACAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.71%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.20,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 2 765070-763582 **** Predicted by CRISPRDetect 2.4 *** >NZ_RBCK01000001.1 Streptococcus chosunense strain ChDC B353 KCOM1699_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 765069 36 100.0 30 .................................... CGCTAATTGTGGCTTTCTTCATGTCTGAAC 765003 36 100.0 30 .................................... TCGTTATTAGGTACGCAGACGATATCTTAG 764937 36 100.0 30 .................................... GTTTTTATGGGTAGTGAAAATGGACCTAAA 764871 36 100.0 30 .................................... TAGTGAAATACATAACGGTCGGTAGGTAAG 764805 36 100.0 30 .................................... TAATTTATTACACGATAATATATAATATAA 764739 36 100.0 30 .................................... AGATATTTTGAAACTCTTTAGAGAGGAACT 764673 36 100.0 30 .................................... TGATAACTCTGAAAATTTGTCTAAAGCACT 764607 36 100.0 30 .................................... CGACACACAAGAATCTGAAGGACTACCAAC 764541 36 100.0 30 .................................... AAGTGATTGTTGTCAATGAAAAATCACAAT 764475 36 100.0 30 .................................... TTGGCACCCCCAAAGTATATATAAAGTAAG 764409 36 100.0 29 .................................... CTTTCCCAAGATTTACAACAACAGACGAC 764344 36 100.0 30 .................................... CGGTTGCTTATGGCTTTAAACGACAGGAAG 764278 36 100.0 30 .................................... AAAACAACAAGGTTCTAAACTAGAAGATGA 764212 36 100.0 30 .................................... AGCATTTGATTACTATTAAATTCTGTGATG 764146 36 100.0 30 .................................... AATTCCTCCGCATCCATTGAGAATTGTCCT 764080 36 100.0 30 .................................... TAGTTTTTTTACATCTAAATTGTCAATTTT 764014 36 100.0 30 .................................... GCCGAGGCTCTAGACCGTGAGAGCTACAAG 763948 36 100.0 30 .................................... ATTTTTTGAAAAAGGAGCGGTAAACCGACA 763882 36 100.0 30 .................................... GTCTCATCATACTAATCGCCCTAGTTATCG 763816 36 100.0 31 .................................... CCGGCCATAAATGTATCGGATTTTGTGAGAT 763749 36 100.0 30 .................................... CAAAACCTAGTTTTGACCTTTAACCAACAT 763683 36 100.0 30 .................................... AATTGTCATAGTTCTCTTGTGCGTTGGATA 763617 36 94.4 0 ..................................TT | ========== ====== ====== ====== ==================================== =============================== ================== 23 36 99.8 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : GGACGATTTTCTATCCTATAATGATTTTGTTGAATGTTGCGAGAAAATGGAGTTTCTGACTAATCATAGCGATTCATTATATATTGTTTTATTTCCTTCCAATGAAGGTTATCTTCATGTCACGAAAGAAGTTTTAGAGGAAATCAATATTGTTTCCGATTATGTTGATCATTTTTATTCTCTAGAATTTATGTATGATCGCTTTACCAATCAGTATCCAATAAATCAAATGCCTGATGAACAAGAATTTTTAACTTCTTTAAGAAAAATTGGATCCTATTTATTTAGCTCGGACATTCTCCACATGAGTTTATCTGTAGAAGATCAAGTAGCATTAAAAATTTTGAATAATTTGTATCAGTACAAAATGAAAATAAAATTCTGTATTGAATCAATCAATCCAATGTTATTGAAATATTTGGAAGAATAGTATTGACGAGTGAGATTTAAGGCTTTATAATGTTTTTGAGGGAACAAAAATCAAAATTGACGAATTTGAG # Right flank : TAGATAATATTAACAATTGTTTAACTTATATAAAAACCCGCTCTGCTGAGCGGGTTTCGTCTATTCTTATCTTCTTACAGTACCCATGTACGGATGGCATGGGCAACGCCAGATTCGTCATTTGTTTTGGTGATGTATTTGGCGATTTTTTTGATTTCTGGATTTCCATTTTCCATGACAACGGGGTTTCCAACGACTTCCAGCATGGCACGGTCATTTTCTTCGTCTCCGATAGCCATGGTTTCATCTTTGGTCAATCTGAGTTTTTCAGCTAGGTGAGTGATGGCTGAACCTTTGTTTACATTCTTTTTAAGGAGTTCGAGGTAGAAAGGAGCAGACTTGTTGATAGAGTAGCGTTCGTAAAATTCTGCTGGGATTTTTTCAATCGCAGCATCGAGAATCTCTGGTTCATCAATAAACATACACTTGACGATTTCTTTATCAGCCATTTCTTCAGGAGTTCGGTAGAAAATAGGCATGCTGACGAGGGTTGATTCGTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //