Array 1 164617-164100 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABETO010000010.1 Streptomyces sp. I05A-00742 Scaffold10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 164616 29 96.6 32 ............................C GAAGCCAGCGACCGGCCGCACAAGTGCCTGGA 164555 29 100.0 32 ............................. GTCACGAACGAGACGAAGGTGCCGACGGTGAC 164494 29 100.0 32 ............................. AACGCTAAATTCGAGCCTGGCCCGTTCCTCGA 164433 29 82.8 32 .C............C..C...G...C... ACGAACCCGTTGTCCTCGCCACAGACGGGTCG 164372 29 89.7 32 .....................G...C..C ATGCTGGCGGTCTCCAACGAGGGCACATCCGT 164311 29 86.2 32 .........A....C...T.........C TGGCCGGCCAGTTCGAGCCGTGTGGTCCGGAC 164250 29 72.4 32 .A..........CAA..C...G..A...C TGGCCGACCTGTGGGACGTTGCCGTCCTCGTC 164189 27 79.3 32 A...........C.--.........C..C ACCCGCATGGAGCCGAACGGCTCGATCGTGGT 164130 29 79.3 0 ............CAC......TC.....C | G,C [164103,164105] ========== ====== ====== ====== ============================= ================================ ================== 9 29 87.4 32 GTGGTCCCCGCGTGTGCGGGGATGGTCCG # Left flank : CTCGCCCTCCGCACCCCCCGCGCCACCGGTTCCTTCGCCTACCTGCACCTCGGGACCGGCCTCGGCGCCGGACTCGTCCTCGACGGCGGCGTCCACCGGGGCCCCCGCACGGGCGCCGGAGAATTCGGCCACCAGGTCGTCCTCGTCGACGGCCCCCTGTGCGCCTGCGGCGACCGCGGCTGCCTCGAAGCACTCTGCCTCGCCGCCGTCGCCGACGGCGACACCCCCCGCGCCGCCCGCCTCCTCGGCATCGGCGCCCTCAACCTCGTACGCCTCCTGGACATCGACCACGTCCTGCTCGGCGGCGGCACGATCCTCGCCCGCCCCGGCCCCTACGCGGACGGCGTCCGCGCCGTGCTCGGCCCCACGACGCCGGTGGACGTCGCTCCGGGGGGTGCGCGGCTCGTGGTGGGGGGCGCGGCGGAGCTGGTGCTCGCGCCCCTCTTCGGCAAGTGAGTAAAATTGCCGCTTCGGCAGGACAGTTGGCCAGGTGGCGGACT # Right flank : GGACCCCGCACGACACCGCGCCCCACGAAGAGCCGTCCGCGCGCCCCCGTGCTCACTCTTCCGAGGGAACGAATTGCACCCTTCTCGCCGAACTACGTTGTTTCTCATGTGATGACGACTTTTCGGCCCACTGTGAAGGGGAACCCCATGAGAACAGCCGCCCTCGTCTCCGCCCTCGCCGCGGCCCTGCTCCTCACCGCCGCCGCTCCCGCCGGCGCCGCGCCGCACGGCATCAGCAGGACGTTCAAGGACCCGGCGGGGAAGGCGGCCACGCACACGCTGTACTGCCCGACGAAGGAGCATGCGCACAGCGGCGGGGTGCAGGTGCATGAGCCTCACAACTACATCGTGGACTCGCACCCCACGGGCGACCGTCGCGGGTGGACGATCACGACCGAGCCGCTGCCGGGCAACAAGCAGGGCAGGACGGTCACGCTCTACGTCCTCTGCGCCTGACGGGCGGAGCCCGTCGGCCCCGCGCAACCCGTCCGGAGGAGCCG # Questionable array : NO Score: 5.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.37, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGTGTGCGGGGATGGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [18-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 10985-10651 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABETO010000025.1 Streptomyces sp. I05A-00742 Scaffold25, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 10984 29 96.6 32 C............................ GATCCCGTGGGCACGCTGGCAGCATCGGCCTT 10923 29 96.6 32 ...C......................... GGCAGATCACGATTCACCGCACGCATCTCGTC 10862 29 100.0 32 ............................. ATGATCAGCCTGACGTACCGGCACGGAAACAC 10801 28 86.2 32 .T..C....-..........A........ CTGCTCCTGAACTTCGTCGGCCTGGTCCTCAA 10741 29 89.7 32 .T.......C...A............... CCCGTACACATTGTGCAGGCCCATGAGCCGGT 10680 29 79.3 0 .T..........G....C.TT.......C | C [10657] ========== ====== ====== ====== ============================= ================================ ================== 6 29 91.4 32 GGGGTCCCCGCGCGAGCGGGGGTGTGCCG # Left flank : CACCACAAATGCCCCGGCTTGGGTGTAATGCCCCTTCCAGTACCGGCGCCAGCATCGATCAATCGCAGCCTGAATCGCCTCTGCCTCGTCCGCGGCTACGGAGTCGGGCAACAGGCCGGCCGCGGTGTCGTGCACGGTCTGAGAGAGTGTCCGCAACATCGTGCGGTCCGACTGAACCATTGCCCGCCGGGGAGCCTGCTGCCCCAGGACGACAGAGGTGTCTACGCCGAGTGCATCAGCGATCTGCATGAGGGTGTTCAAGGACAGCTGCTTGTCCTGCTCAGCCTTCTGGATGGTGGCGATCGACAGACCCGTCATCTCCGCTAGGGCGACCTGGTTGACGTCCCTGCCTCGGAGAATCTTGATACGCTCGCCGTTGGTGTAGTCACTCCACTGCACGGTTGATCACTCCGTTTCACGGTCGCTCACCCTGAACGTACCCTTCGCCTGGACCAGGTTCACAGAGAAGCCCAGGGCCCGCAGGGCCCAACTGGCACAGC # Right flank : TCGCGCCGCTCGCGGCGCGGGCGGATCCGGTCGATGCCGTGACGGTGGGCCGCCGGCCGCGCCCACTCCCCCGGCGCACCAGTCTCAGGGACCGGGCGCGCAAAGGCCCGCCCGGTGCGACGGGGGATGCACACCGGGCGGGCTCGAAGACAGTTCTACCTCATCAAGGATGGGTTATGCATCAAAAACCTGTTCGGCTTGGCGTGGACCAGCGCACGGGGAGCGAAATCAAGCCACGTGCGCGGATGGTCGGACGCCACTTCAGTTGGTCTCTCGGAACGGCGAGTTCCAGATGATCGAAGCGTTCGAGGAGCGCGGCAAGGGCGATTTCGGTCTCCATCCGGCCCAGGGGGGCGCCGAGGCAGTAGTGGATGCCGTGGCCGAGGGCGAGGTGGCCGGAGGGGCTGCGTTGCAGGTCAAGGTGGTGGGCTTGGGGGAAGCGGTGGGGGTCTCGGTTGGCGGAGATGAGGGAGAGGAGGACGGTTTCGCCTGCGGGGACG # Questionable array : NO Score: 3.74 # Score Detail : 1:0, 2:3, 3:0, 4:0.57, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGGGTCCCCGCGCGAGCGGGGGTGTGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGAGCGGGGGTGTTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.60,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [16.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 103163-103011 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABETO010000009.1 Streptomyces sp. I05A-00742 Scaffold9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 103162 30 96.7 31 .............................G CTGCGGTGCTCCGCGACGGCCTGCCACCGGA 103101 30 100.0 31 .............................. GTTCCACTGGCCTTCGAACTGACGGGCGTTC 103040 30 90.0 0 .....................A...C...T | ========== ====== ====== ====== ============================== =============================== ================== 3 30 95.6 32 GTGGTCCCCGCGCACGCGGGGGTGGTCCCC # Left flank : AGGATGCCGCGTCTTCAGGAGAGGTGGAGAGTGCGATGAGTGACGAGTGCGACCACGAGTGGGTCCTCTGGAGCGGCGCCAGCCGCTGCCGCAAATGCGGCACCACGCAATGGGCCGGCACATGACCGGCATCCCGGATCCCTGGCGCGGCGTTCCCTGATGCCTTCTCGGGCCCCACCCGTCGCATGTGCTGCCACGGGTCCTTGCGACGGGTCGCGCCGCAGGCGCTTTCAGCGTGGCAACGGGCCGGGCTGCTCGGATGCTTGCGCGAGTGCTGGGGGCGCGGCTTGAGCGGTGTCCGGGTGGGTTGTGGTGCAACTGCCCTTGCGGGTGGGTGTGCTGTTCCGGGCGGCGAGACCTTGGGCTGAGGGGATAGGCTCGGCGGTGCGGTTGGAGGGGGTGATGGGGTGTCGCTTCTGCCGCGTATGCGGTATTCGCCGGAATCTGCGGAAGTGAGTAAAAAGCGCTGCCGCTGGGGACGAAGTCGCATGTCAACGTCT # Right flank : ACTACGCCGCCACCTTCACCAGCGACAAGACTTGGTCCCCGCGCGGGGATGGCCCCACCAAAGGGCTGTTCGACTTCGCCGACGGCGGAACGGTCCCCGCGCGCGGGGCTGAGCCCCCTACCTCACCTGCACCCCCGAAACCGCCCGAGCAATCACCAACCGCTGAATCTCACTCGTCCCCTCAAAGATGGTGTAAATAGCAGCATCGCGATGCATCCGCTCAACCGGGTACTCACGCGTGTACCCGTTCCCCCCAAGGATCTGCATCGCCTGCGCAGTAACCGCCTTCGCCGTCTCCCCGGCGAAGAGCTTGCTCATCGACCCCTCGGCCGACGTAAAGCGCTTACCGGCGGCCGCCATCCACGAAGCACGCCAGACCAGCAAGCGGGCAGCATCAATACGAGTGCGCATGTCGGCAAGCTGGAAAGCAACGCCTTGGTTGTCGATGATGGGCCGGCCGAACTGCACGCGGGTCTTGGCGTAGTCGAGGGCGGTCTCGT # Questionable array : NO Score: 3.95 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //