Array 1 270722-273065 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUBN01000001.1 Klebsiella pneumoniae strain 194C8 contig_0001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 270722 29 100.0 32 ............................. CCTCCGCTGGTGTGGGGCTTGTCATGCCTGCT 270783 29 100.0 32 ............................. GTCAGGATGGACATTGCGCGCTGGGACGCACG 270844 29 100.0 32 ............................. CTGCTGACGACGTGGATCCGCTGGAACGTCAC 270905 29 100.0 32 ............................. TACTGGCAACGGAATTCGGTTCGACGTTTATG 270966 29 100.0 32 ............................. CGCTCCCCAGGACAAACGCGGTCTCCGGATCC 271027 29 100.0 32 ............................. TTGCACGCACGTGAATAGTCCAGGCCGCCTGG 271088 29 100.0 32 ............................. TCCAGCGTGTGCATCTCGCCGATCTCTTTTTG 271149 29 100.0 32 ............................. TAGGGTATCCCGTTCTCATCCACGGCAATATG 271210 29 96.6 32 ............................T TGAACTGATCAAGGGGCGGCTTCAGGCAATTG 271271 29 100.0 32 ............................. AGTAACGAAACGGTCGCACTCAACCGCGCCGC 271332 29 100.0 32 ............................. TCTTGTTAGTGATTGAGTAGCCCATCTGGGAC 271393 29 100.0 32 ............................. CTACCCGTAAAAAAACCGCTGCCGCTGTCGCC 271454 29 100.0 32 ............................. CTCTTAATGGAATTCGTGAAGACGCTGGCCTT 271515 29 100.0 32 ............................. ATCTGGCGAGATTTTACGGGAAATAATATCCC 271576 29 100.0 32 ............................. GTTTTGACCGAGTATATCTGGCGGGATACCCC 271637 29 100.0 32 ............................. CACGGTTTTCAGGAATTTAACGAGAACCAGGC 271698 29 100.0 32 ............................. CGCAGGCGTGTGCCGTCAATGTCGGCGCCATA 271759 29 100.0 32 ............................. CATATTAAACTCATTGTTGCCGGCGCAGAATT 271820 29 100.0 32 ............................. CATTTTATGGCTGTTCAAAATTGGCTATAGTG 271881 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 271942 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 272003 29 100.0 32 ............................. TCTTCGAGTTCAGGCCGGTATCCCACTCGCTC 272064 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 272125 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 272186 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 272247 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 272308 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 272369 29 100.0 32 ............................. TACAGGACGCACTGGCTGCGAAGCCGTTCGCG 272430 29 100.0 32 ............................. TCGCTCTGTGTCATACGGTTATTAGCCCTGGA 272491 29 100.0 32 ............................. AATTTGCTCATAGAATTGAGACAGTAAACTTT 272552 29 100.0 32 ............................. CCGAAATGGATACCGCCGCGATTGAGTATTCG 272613 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 272674 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 272735 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 272796 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 272857 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 272918 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 272979 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 273037 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 39 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGATAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGTGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //