Array 1 689200-690820 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021770.1 Streptococcus agalactiae strain B508 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 689200 36 100.0 30 .................................... AGGTTTATGCACGTAATTTTGTTTATCATC 689266 36 100.0 30 .................................... TTGTATTTGTTTGATAAAAATTTCTTATAC 689332 36 100.0 30 .................................... ATGCGGTCACTCATATAAGACATCTCCTTT 689398 36 100.0 30 .................................... CCCAGTTGCAATGACTGCGCCAGAAGTCGG 689464 36 100.0 30 .................................... TAATGGTTTATCTCTTTTTTCATCTGTTAT 689530 36 100.0 30 .................................... AATTATCAATGTTTACAACTGTTTTAGTTT 689596 36 100.0 30 .................................... TAAAATCCTGAAACAGAATGGGATTGATAT 689662 36 100.0 30 .................................... AAAATCAGAACGCCTTATTTGAAGCAGTTA 689728 36 100.0 30 .................................... CCGTTCAATCTGTTCTTGCTTTTGGTCATC 689794 36 100.0 30 .................................... ACACCGTTGCGGTTGTTGTCGGTCACTCAA 689860 36 100.0 30 .................................... TCTATTAACAATAGTTTTATCCAATTGTTT 689926 36 100.0 30 .................................... TGAAAACAAGCGCAAAGCTGTCAGAAAACA 689992 36 100.0 30 .................................... AGTTATCAATGCTATATGGTTTCTCATCTT 690058 36 100.0 30 .................................... GTTTAATTTTGAATAATATCATGTTTACTC 690124 36 100.0 30 .................................... TATGTCATTGTGATTGTGGGAATACTTGTG 690190 36 100.0 30 .................................... GCGATGATGGTAAGTCATCATGGACAGCGT 690256 36 100.0 30 .................................... TTTTACACACGATGTCAGATATAATGTCAA 690322 36 100.0 30 .................................... AGTACTGCACTAGGAATTGTAGAGATCAAA 690388 36 100.0 30 .................................... CGTACCATCTATCAATTTACCGCAAGCTGT 690454 36 100.0 30 .................................... CCGATTATTTCCTACATAATACGCACGTTT 690520 36 100.0 30 .................................... TTCTAAATGCTGGTGACTGCTTTGCATAAA 690586 36 100.0 31 .................................... TTGCTGCTAGACCCAAACAGTTTATTTTTAG 690653 36 100.0 30 .................................... TACTTGACGAATTGAAGATGACGGAATTTA 690719 36 100.0 30 .................................... TGGTTATACATTTACTAATCCATCAGCATT 690785 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 25 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTAAGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //