Array 1 14067-13839 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFOL01000022.1 Clostridium botulinum strain ATCC 17843 (B5) 10159_22, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 14066 30 100.0 35 .............................. GTAATGTAACTGTTCCAGGGAAGAAGAAATTAGAA 14001 30 100.0 34 .............................. TATATCCTCTAGGTAGTGTGTCACCAGTTTTTAT 13937 30 100.0 37 .............................. AATATAACTTTAATAGTATGATAATCTGGAACTATTT 13870 30 90.0 0 ........A......T.............A | TA [13843] ========== ====== ====== ====== ============================== ===================================== ================== 4 30 97.5 36 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : ATGCTGAAAATATGGCTAATGCTATTGTTAAAGGACTAGTAGGGGAAACTACAAGCAATATCACACTAAGTCAAGCATCTACAAATAATAATAGTTGGATTAATTTAGATGGTAAAACAGGCACTATAAATACACTAAGTGGTGTAAATATTAGGGAAAAGAAATCTACATCTAGTAGAATATTAGGTGCTTTAAGTACAATTATATAGAAAAGAAGGAGATTGGATACACATTTATTATCCTCCACATGGTGGATATGTTTATGCTAAATATATAAGATATTAAATTTTTGAAGGTATTTCTATAATGTGAGTAACTTTTATTTTTCCAACCTACTTTAATTTTAAAATCTATCTTAACCATTGCTATACAATGCTTTAGGGTAGGTTTTCTATATAAATTTTAAATCATCTCAATTGGTTGGAAAATTTTCTTTAGAATCTTGTAAAATCAATGCTTTTATGATATCTTTAAAATTAAAGAATGGCTATTTTACTATG # Right flank : ATAATAATTGTAGCTTACGCTGTAGTTATTATTTTTTTATTATTCAAAGGAATTTTCTAACATTTATAGAATATTAAATATAACGGCTTACCAATAATTTAGGCAACCTCCTTGCTTAAAAAAAAGAATCCCAATAAAAAGGGGTTCTTTTTGAATGGAATTTTCTATATATCTATATATTGGTGCTATGTTTTGGTCTATTCTTATTATATCCAGATGTAGAAAAATTAATCAATCAGAAATATATAATATGTAAATTTTTAAAGGTACTTCTGTAATGGAAGTACCCTCTTTTTTTATTGGAAAAATTATCATAATTTATATAAATTTATCATGAAAGCTATTGATTTATTATACTACACGTAGTATAATTGTAATTGTAAGGAGGTGAGAAAAAAGGTGGTCAAATTAATAAGAAAATTAAAAAAGCTTGATAAACTACTGGGAATAGTCATCAAGCTACTGGTAAAAATAACAATCATAATAATGCCGCTTAAACA # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 81031-81194 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFOL01000003.1 Clostridium botulinum strain ATCC 17843 (B5) 10159_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 81031 31 100.0 36 ............................... AAGGTTAGCAAGAATATAATAGATAAAGCTATTAAA 81098 31 100.0 35 ............................... TGTAATAATACACTAATACAGTTAAAGTGCAAGAA 81164 31 96.8 0 ..............................C | ========== ====== ====== ====== =============================== ==================================== ================== 3 31 98.9 36 ATTGAACATTAACATGAGATGTATTTAAATT # Left flank : AATGTTTCATAAAGAAATAGATTATGAAAATATTAAAGAGGGAGAATTAGATGAAATTTTAGAGGGGATAAAAAAAGAATTTTATGATCTAATAATATCAGTAAAAGAAGAAAATAAAAATATAATATTAGTTACTAATGAAGTAGGTTATAGCATTGTTCCAGCCTATAAATTAGGTAGGATATTTAGAGATTTTCAAGGTATTATAAATAAATTTATAGCTTCCTTGAGTGATGAGGTTTATTTAGTAACCTGTGGAATACCCTTAAAAATAAAATAAAATTAATTTTAGTAACTAATTAATCTAACTATAAGTAAAAGAATTTTCCAACCGCATTTAATTTTAAAATCTATTCTAGGTATTGAAATATAAGCTTTAAGATAAGTTTTATCTCTACCTTTATAAAAAATGGTAAACGGTTGGAAAAATTTCTTTAAAACCTTGTAAAATCAAGGCTTATATGATATTCTTAAAATTAAGAAATGGCTATTTTACTATG # Right flank : CAGCATGTAAAATAAGGTGATTCAAAATAAATTAAATCTATTTTGAATCACCTTATTTTTGTGTAACAAATACAAGCTATTTTAGATAATATTTTAAAAAAGCATATAATTATTATTTTATATTGTCACAATAAACATTAATAGCATCTCTTAAAAATTTAGAAAGACCAGTTTTATATTTATCTATATTAGCAGTAAATCTTTCATCATTAACATAAATTTCTCCAAGACCTCTAAATATTTCAGGAGTACAATCATAAAAGTTTTTTGAAATATGCTCTCTAGATTGGTGTATATATTCTTGAACTTCTTTATCATCTGGATTTTTGTCCATAAGATTTGCTAGTTTTTTATAAATAATATCCCAATCTTTCATTATATTACTCCAATCTTCCTTTGTATATTTAGATGTTTTTTCATTACTTTCTTTATAAGCAGAGGTGTTTCCATATTTTTCTTTTACCTCTTCTGAATATTTTCTTTGATGCTCCTCTATTTCA # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACATTAACATGAGATGTATTTAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.65%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 221347-221505 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFOL01000001.1 Clostridium botulinum strain ATCC 17843 (B5) 10159_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 221347 29 100.0 35 ............................. TAATTTTATCATAGAAAATGTAATTCTATTTGAAT 221411 29 100.0 37 ............................. ACAATAGAGGGGCTAAGTTCCTGGTGTGAAGCAAAAT 221477 29 96.6 0 ............................C | ========== ====== ====== ====== ============================= ===================================== ================== 3 29 98.9 36 TTAAATACATCTTATGTTACTGTTCAACA # Left flank : TTATTATACCTGTAAATATAAAGTTTTTCTTCTTCCTAGTTAGTTCTTTTAAGTCTTTTTTGTTCTTTAAAAAATAACCTCCCACTGCAATTGCTGAAAAAATAGTTGCCCATCCCGTAAATCTAGGGAAACTTCCCATTAACACCATATACATTATCACTAATAAGGCTATATGGGATTTTTTCATATTACGAAATTTATCCACAATACTCCCTCCATATTTTTATAATATATTTCCTACACAAATATTCTTCTACAAGGTTATGGATAATCCTTCAAAAATATAAAATAATATACAATATTTACATAACTACAAAAAACTATTTTATCTATTCCCTTTAAATACTAAAAACCTGTCCTAAAAATAGACAGGTTTTTAAAATTGATCTAATAATTTACATATAAATTATCACAATGTGTAGTTTAGTTTTATAAAAATCCCTATGCCATTCTCTAAGAAGTAAGCGACTCACACCAACTCGTAGATTTGGGCTCTCTGC # Right flank : CATAGTAAAATAGCCATTCCTTAATTTTAAGAATAGCATATAGCCTTTGATTTTACAAGGTTTTAAAGAAAGTTTTCCAAGTGATTTTACTTTTTTATAAATATAAAACAAAAACCTATCCTAAGCCTTATATATCAATGGCTAGAATAAGTTTGTAAATTTGTTACGCCTGGAAAAATTCAATTATATATAAGCTATATACTATACTCATTAATGAAACTACTTCTCCCATTCTCGAAGTAGTAAGCGACTCACACCAAATCTGAGATTTGGGTTCCCTGCTTAAATACTATATTATTGATATGAAATGAAGCATTCCTCCAGATAATAATGCTACTACAGCACCTATTATAGTTCCAATACCAGCCCCTTTTACATGATGCCATGGATTTCTATATTCTTTATCCATATCCTCTGTACCAGGTATTCTAGTTTTTTTACTGTGACAAAAAAGACCTATATCTAGAACAATCATATCATAAATGTTTACTACAAAAAAC # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTAAATACATCTTATGTTACTGTTCAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 2 228374-227880 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFOL01000001.1 Clostridium botulinum strain ATCC 17843 (B5) 10159_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =========================================== ================== 228373 30 100.0 36 .............................. TATACTATAAGTTTTAACCATAATGTTAATTTCCCT 228307 30 100.0 36 .............................. TTGTGTTTTATCAAACATTGGTGATACCTAAAGTTA 228241 30 100.0 35 .............................. AAACTATCTACTTATCTTTTTTTAAAATTAATTAA 228176 30 100.0 36 .............................. TAGAGAATGAAGCTAACTGATATGGCGGTAGTAGCT 228110 30 100.0 35 .............................. AAGGTTAAAATTCTAGGTTCTTTAAAAGCGTGGTC 228045 30 100.0 34 .............................. TATATTGGACAACAATAGTGAGGAGCCAGTATTA 227981 30 100.0 43 .............................. GTTAAATTTGTTTGCCGTTCTCCATCTATAAGTATTATTGAAC 227908 29 80.0 0 A..-...........AG...........GC | ========== ====== ====== ====== ============================== =========================================== ================== 8 30 97.5 37 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : TAAAGGTTTTGTTTTAAATACAAATGGACAAGAATCAATCATTAATGCTGATAGTGCCGTTGTGGCTATTGGATATTCATCTGAAAAAGACTTATATAATGAGGTTAGATTTGATATTCCAAATGCAAGACTAATTGGAGATGCTAATAAAGTTCAAAATATTATGTATGCTATTTGGAGTGCATATGAAGTAGCTAAAAACCTTTAAATAAACTTTTGCAAAAAACTAGAATGGGTTAATATCCATATCTAGTTTTTTGTTCTTTACTGAAATTCTATAAGTATATGAGTGTTTTGTTATGTACTACTTGTGTATATTTAAAGTTTTCCAAGTGAACTCAAATTCAAAATCTATTCTAAGCATTGATATATAAGGATTAGAATGGGTTTTTATTATGTATTTCTAAAAAAGCAAAATCACTTGGAAAAATTTCTTTAAAACCTTGTAAAATCAATGGTATATGATATTCTTAAAAATAAGGAATGGCTATTTTACTATG # Right flank : AGAGAACCCAGCTCTGTAATTTAGTGTGAATCTCGTACTTCTTGGAGCAAGAGAGTAGATTTTTATTGACTAAAATATTTTTGAAATTTAGTTTTAAGTTTAGGTTGTATTTTAGAGTGCTGTTGGAATTTTAAACCCCATTAAAAGAAGTTAAATATTTTCTTTTAATGGGAGCTATATAAATTGTTAGATACTAATTATTTAAAAATTTATTTAATGAATCATTATCTTTAAATAAGTTTTTTAAGTTCTCATATTTTTGTTCTAAATTTTTTCTATCATATTTATAGGATTCTTCTCCTATATTCTCTACATTAAATTTAATAATTTCAGCATTTGGTATAAGATATAATAATACCACCGCATTCTTTTCTAAGAGTTCTTCAACTTTTTTGTCCTTCCAAAATTTATTATAATTTTCTTCCTCTAGATTTTCATTTGTTTTATAGTTAACGATTATTTCATATGGCTCTTTAGTAGTTTGTAGGGTAAATCCAGCA # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 3 239778-239616 **** Predicted by CRISPRDetect 2.4 *** >NZ_LFOL01000001.1 Clostridium botulinum strain ATCC 17843 (B5) 10159_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 239777 30 100.0 36 .............................. AATGATATATAATGGCAAAAGAATACGAGGTATTCC 239711 30 100.0 36 .............................. TGTTCATATGTACCTTTAGAATATTCGACCCAATCT 239645 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 3 30 100.0 36 GTTGAACATTAACATAAGATGTATTTAAAT # Left flank : CATAGGCTGATCCAATAGTTAAAAAAAGTTCTGCAGTTATATCAGAATGAGTAAGGGTATAGCGTCTTCCTAAAATAGGCTCCGTTGAGGTTACACCATTTCTAAATTCAACTGAAAGTTTATCAGTATTCAATTTGTTCATTTAATCCCTCCCCATACAATACGTTTTATACAATATTATATGATAGGATTTATGAATTTAGTATATTTATATATAAATCAATTTTAATTATAATATTTAACTTAAATCTTGTATCAGATCTTGTACTACCAATAATATATCAGCTAATAGTACAAATAAAATATTTTCATATTAATTGAATTTTTCCAGGCATAATAAATTTATAAACCTATTCTAGTCATTGATATATAAGGATTGGAATAGGTTCTTATTTTGTATTTATAAAAAAACAAAATCACTTGGAAAACTTTCTACGAAGCCTTGTAAGATCAATGGGTTTATGCTATTCTTAAAAATAAGGAATGGCTATTTTACTATG # Right flank : TTGTACATAATCTGAAATTAAAGCGAAGTAACCCTTGAAAATAAAAGTACTAACAATGTTCTTTGAAGACTGAATAATACGGTGTTAGGAAGTAAAAATTTTTTATAACAAAATATATCTTTACAAATGTAGTAAGGTGGCTTACTATATAAATGAGGAGGTTTCATTATGGAAAGTTTTAAATTTAGTCTTAGGGATATACCAAAACGAGAGATTTTAAATGAATATTCTAGCCGATTTCCGGGTATAAATGTAGATGCAGTCGAAAGCTGTATAGCACTCCTCAGGACGGCTTCTGATATTTCAAAAATACTTGATGAACACTTTTCTAAGTATGGCATTTCGGAAGGAAAATTTACAATTTTGATGCTGTTATATCGACAGAGTGATTATCAATTATCTCCAATATCTCTTAGCAAAAAAGCTGAAGTTACTAAGGGAACTATGACAGGATTAATAGCTGGCCTTGAAAACCAAGGTTTCATAGAGAAAATCTCCAA # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //