Array 1 2800-661 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMNV010000025.1 Alistipes shahii strain 1001275B_160808_A9 NODE_25_length_27199_cov_55.825, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2799 36 100.0 30 .................................... GGCGCCTTCCGGAACCGTGGCGAACAGGTA 2733 36 100.0 29 .................................... GCGGGCAACGCTCAGGTTATTCGGGTCCC 2668 36 100.0 30 .................................... TAGATGTCGTTGTAAAGTTCATCGATCAAT 2602 36 100.0 29 .................................... GCCTTCTTCAAGGGCATGATCTGGCGACT 2537 36 100.0 30 .................................... AAGCGTTGCCGCCTCAATTCTGAATTAATC 2471 36 100.0 30 .................................... TTTGGGCTGCGACGGTCCGTAGATGTCCGC 2405 36 100.0 29 .................................... TCTGTAATACTTAGCGGTGTATCAAGTTT 2340 36 100.0 30 .................................... GGCTGTTTCCTCGCTAATACACAAGCACGA 2274 36 100.0 29 .................................... AAATTCATACTTTTATCAGCTCCTTCAAC 2209 36 100.0 30 .................................... CGCCTTCGGTCGAAGTCTCGACGACGATGG 2143 36 100.0 30 .................................... GGAACCTCGGTAATTCAAATAATCGGGAGT 2077 36 100.0 30 .................................... CTATGTATCGAAATGAAGACTACCGACCGA 2011 36 100.0 30 .................................... AACCGCTGCCGGTGCTGTTGGCAATATCGC 1945 36 100.0 29 .................................... GACGCAAGCATTCTTCACATCGACCGCAA 1880 36 100.0 29 .................................... GTACCAGCATCAGTTGCAAACTGACTAGC 1815 36 100.0 30 .................................... TCGGCGAGCAAAGACCAGGAAGCAGGCCAA 1749 36 100.0 30 .................................... AAGAGTGTCCGATCTTATGACGGGCGCGCT 1683 36 100.0 30 .................................... AGAAGCAAGTAATGCGTTTCGCTGCGTCGA 1617 36 100.0 29 .................................... GTAGAAAAGAATATATGAAAGCGTTGGAA 1552 36 100.0 30 .................................... GGCGACCGCTTCAATCGAAGTTGTCGTACC 1486 36 100.0 30 .................................... TCTCCATCCAAAAATGATAGCCTTCTGGCG 1420 36 100.0 30 .................................... TTTAGCAGACTTCGCAGTACACTCGATTCT 1354 36 100.0 30 .................................... GACCGGCTCTTTACGCAGTCCCCGGATTTG 1288 36 100.0 30 .................................... AAATCAGCGCGAGAATCTTACCCGGTGGAA 1222 36 100.0 30 .................................... TGTCCGACTTATGTATGAGGTTCGCCGCTG 1156 36 100.0 30 .................................... GGTATGCCCGAAGAAGAAGTGCCGCTCATT 1090 36 100.0 30 .................................... AATCCTTCCTCTATCTGGATGGTCTGGAGA 1024 36 100.0 29 .................................... TCGCCATCTTGAGGGTGGAAATCTGTTTG 959 36 100.0 30 .................................... CAAAATTAACTTCACTAGAATACCGAACAC 893 36 100.0 30 .................................... TCGACATCTGCCATGTCTTCAGCCGCCTTC 827 36 100.0 30 .................................... ACCTTGGGATGTGGCTCGCCAGTGGCTCAT 761 36 100.0 29 .................................... ATAAAGTAAATTGTATACATTTGCAGTGT 696 36 97.2 0 .......................A............ | ========== ====== ====== ====== ==================================== ============================== ================== 33 36 99.9 30 GTTGTGGTTTGATGTAGAATTTCGATAAGATACAAC # Left flank : AAAGATTGCATATCCTTTGTTGGAGTAGTCGAATGTCAGAAGTACGCTTGAATGCTTATCGAATCATGTGGTTGTTTGTCTTTTTTGATTTGCCAACCAATACAAAAACGGAACGACGTCATGCGGTGCAATTTCGCAAGGCGTTGGAAAAAGATGGTTTCACAATGATGCAGTATTCAGTCTATGTGCGCCATTGTGCATCGAAGGAGAATATGCAGGTTCACATTAAGCGGGTTCGACGATCGATGCCTCCGACAGGATTTACAAGTATTCTTGCTGTAACGGACAAACAGTATGGAGACATATTAAATTTTTGGGGTAAAAGCGAACGAGCAAAACCGGAAATTCCGCAACAATTGGAATTTTTCTGATAAATCGTTATTTTCGTTCTTTGAAATACGGAAAATGCATCAAACTGGCTTCGTCGGAACACCCGATCGTATTTTTATAGTGGCAGACAGCCCGTAAGTAACACTTTATCAATCAATATGAGGCCCAAC # Right flank : CGGCAGTATTGGAATGCTGCATAATTGCAACTGTTGTTTACATTACCCTTTTGACTCAAGAAGATTTCAAACTCCCTTAAATACGTCAAATCCAATTCATCAAAACGCATATTGACCGAGCGGAATTGCGACACAAGGACCAACGTTACCTTATGTTTGCTGGCGGAACTGTACTTTTCGACTTTTTCCAAGCGTTCGATAATCTGTTTGAAGTACTCCCCGACCGTGCAGTTGATTCGTTTGCCGTTCTGTTCAAACAGCGTATCGAATGTAACGGGAATTTCCAGCACCTCCAACTTTTTGATTTTCTTCTCGTATTCACGTATCTTGGAGGTTATTTGAAACTGTATTTCTGCTCTATCGGGGCAGTCGGCGGTAGGTTGTTGCTTGTCGAAATCCCAATGCACCAAAGCTTCCGAAATGCCCAGACCGACGAACTTACGGCGGCGGTCATGGGTAAAGACAAGAGCAAGAGGGGCTAAACGGTTTCTGTTGATAGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATGTAGAATTTCGATAAGATACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //