Array 1 123832-124650 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLAF01000025.1 Acrocarpospora pleiomorpha strain NBRC 16267 sequence025, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 123832 30 100.0 36 .............................. CGAGCGCACCGGCCTGCCCGTCGGCCGGGCCGACGT 123898 30 100.0 35 .............................. CCGCTCCTTGGCCGTGCCCTCAAGGGTTGGCTGCC 123963 30 100.0 35 .............................. GCCAGCGGCGGCGCGGGGTGCCAGCGAGACGGGCG 124028 30 100.0 34 .............................. GGGACGGGCGCCCGCGGCGGTGTGGGAATGGGCA 124092 30 100.0 35 .............................. TCCATCTCCGCCGCGCTGGCGTCGGTGAAGTTCAA 124157 30 100.0 38 .............................. GAGTGGGGAATCAGGTGGCTGGCTGGCCGCGGCGAGCG 124225 29 96.7 36 .......-...................... CATCATGCTTAACGGCCGAACCCAGACGGCCTGGTA 124290 30 100.0 37 .............................. GGCCGACCATGGCGGACCTGCGCGAGTCGGGCGAGAT 124357 30 100.0 35 .............................. CCCTGATATTCGCTATTCTCGATGACGTAGGCCAC 124422 30 100.0 37 .............................. TCCGGATCAACGCCCCCCACGTCCGCGTGCAGACCAA 124489 30 100.0 35 .............................. CTCGCCTGCGTAGGTGGATTCGGCCGCGTACATGC 124554 30 100.0 37 .............................. ACCTTGCCGACCTCGCCCTGAACGGCGCGGAGTTCGG 124621 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 13 30 99.7 36 GTTGCGACCCCTCGCAGGGGCGATGAGGAC # Left flank : ATCACCGCCCACATGGAGCTGGAGAACGTCACCGTCGAGCGCGACCTGGCCCGCTTCAAGCGCAGCGTGGACCAGCGCTGGGGCGAGCTGGTCTACGACGGCCTGTGGTTCTCGCCGCTGAAGAAGAGCCTGGACGCCTTCATCGCCGACGCCCAGCGGCACGTCACCGGCGAGATCCGGATGACCTTGCACGGCGGCCGCGCCGTCGTCACCGGCCGCCGCTCCGAGACCTCCCTGTACGACTTCTCACTGGCCACCTACGACACGGGCGACACCTTCGACCAGTCCCTGGCCAGGGGTTTCGTCGAACTTTGGTCACTGCCGAGCAAGATCGCCGCAGCCCGCGACGCGCGCGCCTGACCGCCGGACGGCGGGGCCTCGGCGAGGCCCCGCCGTCACCCTCCGGGGCCCAGGTCGGGTCGCCGCGCTGGGGCGGCCTTTTCAGGATCGCCCGGACGCTGTCCGGAATCTCTAGGGCACCTCAGGCCCGCCCCACCGAA # Right flank : CCCCAAGGTAAAGCCGCTGGTCATCGCTGGTGGAGGCGACGGGTTTTGGGGCTGGTTTTCAGCGGACCTTCGGTTGTGCAGGAAAGCCCGGCGTGTCGCTGAAATCTGGCGCTATGGAGGAGTCAAGGAGCAGCGACCTTAAGGGTACAGGTCGGTACTTGCTTCCACGCTTGATACTGTCCTCTTTCGTTTCCCGATCATAGATCCACCTCGAACCAAACCACTCGGCCCTTTGGATGCTGGTGCCAACCCCAGGAGGATGCGATTTCCTGCACAATCCAAAGTCCTAGCCTCCTGGAACGATAAGGCTCCGAGAACGAGAACGGGTGCACTTCCGGGGCGCTATCAGCCGAGCCCTCGTCTATCACCTGCACGCGGATTGCATGTACGCCGCCGGTGACTATTATCCGTAGTCTCCCATTCGGAACTCGACCCGAATCCGAATGCCGCACAGAATTGGTAGCCAATTCCGTAGTGAGTAAGACTACTTCATGAAGGCG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGACCCCTCGCAGGGGCGATGAGGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [33.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 2 132375-130249 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLAF01000025.1 Acrocarpospora pleiomorpha strain NBRC 16267 sequence025, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 132374 30 100.0 35 .............................. CAGCACATCCTGGGCTACTCCCCGCTGCAGACCGG 132309 30 100.0 38 .............................. TCGAAGTGGAGGTCGGTGGTCGCGTTGGTGGTGATGAC 132241 30 100.0 36 .............................. CTGGACGGTGAAGGCGTAGTAGCCGTACACCACCAG 132175 30 100.0 37 .............................. ACTCGGAGGAGGCGGACACCGGCGAGCTGTACGCCTT 132108 30 100.0 33 .............................. ACCATCTGGTCGGCCGACAACCCGAGGGACTCG 132045 30 100.0 37 .............................. ACCAGCCTCTCCAAGTACTCCTCGTCGGGCCTCTTGA 131978 30 100.0 36 .............................. ATGTGCATCCGGGTGATTTTCGGCACGATGAGGCCG 131912 30 100.0 36 .............................. TGGATCTCGACCCGCCAGCCGAACCGCTGGGCTAGC 131846 30 100.0 36 .............................. ACGACTCCCAGGCGCTGGTGGCGGGGACACTCCCCA 131780 30 100.0 38 .............................. CGGCATGGCGCAACTGGATCGACAAAGCCCACCACGAC 131712 30 100.0 35 .............................. GTGTGTGTGTTGGACGTAGGCGGCCTGCTGTTCGG 131647 30 100.0 36 .............................. CGGTGAAGTCGGCCCGGCCGAAGGAGCCGTTCGGCT 131581 30 100.0 37 .............................. GGCAGGGGCACAGTCCGGCCGAGGCCGCCGAGCTGGC 131514 30 100.0 35 .............................. GCCAACATCGCCGACGTCTACGCCCAGCCCTCCGG 131449 30 100.0 37 .............................. GCATTTATCTCGATGAGGACGGGACGCTTTCTCATTG 131382 30 100.0 35 .............................. GTTGCTGGGCCTGCCGCCCTCGGCCCCACCCCCAC 131317 30 100.0 35 .............................. ACACCACGCTGCTGGCGCTCTACCCCCACGGGGAA 131252 30 100.0 34 .............................. CGGCCAAAGTTCCTCGACCGGGACGGCCCTGCCG 131188 30 100.0 33 .............................. GAGGGGGCTGCTGTTCGCATGGTGGCTACGAAG 131125 30 100.0 36 .............................. GGCGACGTCGTGGGAGGGCGTGCAGATCGAGCTGTT 131059 30 100.0 38 .............................. ACGAGTGACTCGACCCGCTGGCACAGGCACTCGGTCCG 130991 30 100.0 36 .............................. GCGTAGGGCGGGTTGCCGATCCGGTAGGGGGCCGGG 130925 30 100.0 36 .............................. CTGACGCACGTGATGAACTCGTCGTCCGTGACCTGA 130859 30 100.0 35 .............................. GGGCTGGGCTGATGGCTTTGGGCCCGATCTCCCAG 130794 30 100.0 34 .............................. TCCAGTTCGTCGAGGTCGATTCCGGCGATCTTCG 130730 30 100.0 35 .............................. CTCACACCGCGTTCTACGCCGGCCCGCGCATCCAC 130665 30 100.0 36 .............................. ACGTCATCGACGACTTCGGCGTCCACCGGCTCACCG 130599 30 100.0 35 .............................. TTGTGGGCGTGGGCTCACCGCAGACCAGTTCCGAT 130534 30 100.0 35 .............................. CGTTCCGCCTTCGTCGTGCCACCCCAGATGCCCTC 130469 30 100.0 33 .............................. GGTGAGTTGACAATCATGTCGGCGGCATGGGGG 130406 30 96.7 32 .........................A.... CGATACTTCGCGCCTGGATTCACCGCGCCGAA 130344 30 96.7 37 .........................A.... ACTGCGGCCAGTGGAGTTGGTAGCAATACACGCACAA 130277 29 83.3 0 T..............A......-....G.T | ========== ====== ====== ====== ============================== ====================================== ================== 33 30 99.3 36 GTCCTCATCGCCCCTGCGAGGGGTCGCAAC # Left flank : TCCCCAAGGGGAGCATGGCGATCCGGATCCGCGACGAGCTGGGCGTGCTGTTTCGAGATCAGGACTTCGCCGCCGCCTTCTCGGCCCTGGGACGACCCGCTCTCTCCAGCCCGTCTGGCGCTGGTGTCCATCTTGCAGTTCGGCGAAGGCCTGTCCGACCGCCAAGCCGCTGAGGCTGTCCGGGCGAGGATCGACTGGAAGTACGCGCTCGGCCTGGAGCCCAACTACGCCGTTTCCAAGCCTCCGTCACCACCGTCCTCGATCTCACCTACTACAGCGTCATCGTCTACACCTTCCCGCCCGGCAGCACCCCTCAACACCTCGCCTGGGGAGCCACCGAACCTGAACCCACGGATATCCTTTAACCCAGCTCCTTGACCCCTCTATAGCGCCAAAATTTCAGCGACACGCCGGGCTTTCCTGCACAACCGGAGGTCCGCTGAAAACTAGCCCCAAAACCCGCCGCCCCCACCGCCAACGACCAGCGGCTTTACCTTGGG # Right flank : CTCCCACGCAGCACCCAACTCCGGGGAAGGGCCCAGCCGCCTCAGAGTCCGACGAGGGCGGTATGAATGTGGTCGTCAAGATCGGCTACGAACGTGTCTGTACGCCAGGGCCGCAAGGCAAGTCGGGTCTGCCGGAGCCGCTGGGCCGGCACGCGTGCGCGGGTCGCGGCGGTCAAGTCGACGCACTCGTGCAGCAGCCCAGCTGTAGCCTCGGCCGCTCCGGGCGCACCGGTGCGGAGTACGGCGAGTGCCCGGTCGGCGAGGACGATGCCACGCTGAACGGCGTCGCGGAACCCGGTCAATGCTGCCGCCGAGCTGGCCAGCTGCTGCTCAGCCTTCTCGGCCTCCCCGATGAAGATGCCGCAGACGCCTACGAAGCCCTGGAGATGGCCGGGCGTGAAGCTGTCCACGGCCGGATCGCTTGTGGTGTCCAAATCAAGATCATGCCAGGCCAGATGCAACGCTGTGCGGGCGTGCCGTTCCTTGCCGGAGCGAGCGGC # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTGCGAGGGGTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 3 133888-132998 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLAF01000025.1 Acrocarpospora pleiomorpha strain NBRC 16267 sequence025, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 133887 30 100.0 36 .............................. TCTTACTGCGCCGGGCCAACCCGGAGGTGTTCGCTG 133821 30 100.0 37 .............................. CGCGATGGCGGCTGGACCAGCTACTGCTCGCCCCCGA 133754 30 100.0 36 .............................. CCTGCCGGTTGTCCTTGCGCGACCGGAAACGCGGCG 133688 30 100.0 35 .............................. ATGCAGATCGCGCTGAATGAGCAGCGGGCGCGGAT 133623 30 100.0 36 .............................. CGCAAGGTCTCCAGCGGGGTGGTCTCGCTCATCCGG 133557 30 100.0 35 .............................. AGGGAGTCCGGCGTGAGCAGGTGAAGCGGCTCCTC 133492 30 100.0 37 .............................. TCAACGTCTACGTGTGCAGGGGTCGATCCGCGCCGAG 133425 30 100.0 37 .............................. GCGGGCAAGCACGGCCGCCACTACCCGAAGGCGATTA 133358 30 100.0 37 .............................. ATGACGGCCCGGACGAGTGGACGTGTCCGGCGTGCGG 133291 30 100.0 35 .............................. GCGGCAACCGGTTCCGTGTCACTCGGGGCTGGGAC 133226 30 100.0 36 .............................. AAGTGCTTGCGGCGTTCGGCGTCCTTGGAGTCCACG 133160 30 100.0 35 .............................. TGTTCGGTGGCGGCGTGGATGGCCTGGAGGAGGCG 133095 30 96.7 38 .........A.................... CGGACGGTGTTGGCGGCCTGGGCGTTGCGTTCGGCCTT 133027 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 14 30 99.8 36 GTCCTCATCGCCCCTGCGAGGGGCAGCAAC # Left flank : CAGGCGCAGGTGGGGTTCTAGTCGGTACTTCGACGGGTGCCTGGTTCATGCACCCAAGCGTTGGTCCACTGGTAACGGGCGTTCAGATGGTCTTGATCATAACTGTGGTCGTGACCCTACTGTTCGGCAAGGAGGCACACAGCGAGCGAGCCTTCCGATTCTTGCGGTGGCTGGCCAATCGCCCAGAACCAGGCGACAGCGCATCGACCACGCCCCGCACAGATGACTCGAAGTAGCCTCAGCCTGCCCAACTAAAAGACTATTTCGGGCGGACATCATAGGAATGACCGATTCCGAGCATGGCGGCGCACTTCTGTACGCTTTTGTTCCGTACTACGTGAAGACCGAATACCTTGCGCTTCAGCTCCCAAATCAAGATCATCATCATTGATGATGATTGCAGCAAACCGCCGGGGTCACATGCATAACCGGTGGTTCGCTGCATTCCGCGAACGAAGAGCATCGACTCCACGAGCTTTGAGCTGGGACTTTACCGTGGG # Right flank : AAGAACGCCCGCCCCATCTACAAGGACACCGTTGATCTTGCCGAGAGCGGGTCGTGGTGTCGCTGCGCCAAGTCGAATCCGAGCTGATCCCGAGCATCACCGTCGAGGTGGCGCGGGCCGCGTTCCCCAAGGGGAGCATGGCGATCCGGATCCGCGACGAGCTGGGCGTGCTGTTTCGAGATCAGGACTTCGCCGCCGCCTTCTCGGCCCTGGGACGACCCGCTCTCTCCAGCCCGTCTGGCGCTGGTGTCCATCTTGCAGTTCGGCGAAGGCCTGTCCGACCGCCAAGCCGCTGAGGCTGTCCGGGCGAGGATCGACTGGAAGTACGCGCTCGGCCTGGAGCCCAACTACGCCGTTTCCAAGCCTCCGTCACCACCGTCCTCGATCTCACCTACTACAGCGTCATCGTCTACACCTTCCCGCCCGGCAGCACCCCTCAACACCTCGCCTGGGGAGCCACCGAACCTGAACCCACGGATATCCTTTAACCCAGCTCCTTG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTGCGAGGGGCAGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-11.00,-11.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 4 142879-143888 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLAF01000025.1 Acrocarpospora pleiomorpha strain NBRC 16267 sequence025, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 142879 30 100.0 34 .............................. AGGTGACCGAGCCGCCCTGGCCGAGCGTGACCGA 142943 30 100.0 36 .............................. TCGAAGACGATGCAGGTGACCTTCCGGCCGTCCACG 143009 30 100.0 33 .............................. GTCGAGGTCTTCTCCACCCAGTCCTTGCGCCGA 143072 30 100.0 35 .............................. AAACCTACTGGAGTCAGGGCAGGTCAATCGGGCTA 143137 30 100.0 36 .............................. ATACTGAGGGCCTCGGAAACATGATGCGCGATCACG 143203 30 100.0 36 .............................. ATGGGCGTGATCCGCAGTGGCCTGATGCGCTGGGCA 143269 30 100.0 35 .............................. TTCGTCGAGATCATTCGCAAGGCGGCGACGCAGAC 143334 30 100.0 36 .............................. TCAACGATTTGGACGGCTACAACGGGCGGGTCCGGC 143400 30 100.0 39 .............................. GTCATAGCGACAACTAATCCTTCGGCCAGTCCTCGCGGC 143469 30 100.0 33 .............................. TGCTCCAGTGCCCGCGCGCCGACTGCGGCATCG 143532 30 100.0 35 .............................. GAGCAGGATGCGGCGGTCACCGTGACCGGTGACGT 143597 30 100.0 38 .............................. ATCACGGTCGGCTTGGTGTGGCCGGTCACCGCCATGAG 143665 30 100.0 33 .............................. CCCGCAAGAACGGCAAGAGCGAGCTCGCCGCGG 143728 30 90.0 36 .......................TCA.... CAGCGGTAGACTTCCTGATTCCACGTCTGAGGATTC 143794 30 90.0 35 .......................TCA.... CTGATCATGGCGCGCGGCTACTACACCCGCAGCCT 143859 29 93.3 0 ...T.....................-.... | T [143882] ========== ====== ====== ====== ============================== ======================================= ================== 16 30 98.3 35 GTCCTCATCGCCCCTGCGAGGGGCAGCAAC # Left flank : CTCGGCCGCAAAGTCGCCTACGACGAGTTGCTCTACCTTGAAGCCCTTCAGCTGACACGAACCTGCTTGGAAGACCAGCCATACAAGCCGTTCCGGATCTGGTGGTAACGAGTCATGTACGTCGTCGTGGTCTATGACACCGCTGCAGAGCGTAATCCGCAGATCCTTCGTACCTGTCGCCAGTATCTCCACCATGTCCAGCGCAGCGTATTCGAAGGAGCCCTCAGCGCCGCCCAGTTCAAGCGCTTCCAAGCCGCCGTGGCGGGTGTGATCGACACTGGATACGACAGCGTGCTGGTGTACACCTACCCACCCGGTTCCGTGCCACGTCGCGAAGAGTGGGGCGCTGCCCAGCCGTCCCCGAGCGACATTCTCTAACTAAGATCAATCCGACGGATTGCAGCGAACCACCGGGCTCAGATGCACAACCGACAGTTCACTGCATTTCGAGCACCCAAACCACCGACTCCACCGCCATTGAGCTGGCGCTTTACCTTGGG # Right flank : CATGCCGACGCTGGCGAGCCAGGCGACGAGCACGGTCGGTCCTGAAGTTGACCCCTGACGCTAGGGAGGTGCTGAAAGTGGAGGACTGGGCCGAGATACGCCCCCGGAATCCTCACCGCGCTGGGCACGACGTCCACCGCCCTGCGCCTGGTCGAGGCGATGACCGTGTCCCGCGCTGTCGCCGCCCTGCTGGCCGGTTCCACCGACGGCCAGCGGGACCGCCTCCTCGACGCGCTGGAGGAGCTTTGCGCGAGCAGGTCTGACGTCTCCTCAGGCACAATTGATCTTTCTCGTGCTGTGGGCGGGCGGGCCTGGGCGCAGGTCACCGATGGCTCCGGCATGGGCTATCGTCGCGGATTGAACAGTGAGAGGAGACGACTCGGTGGTGCAGGAGACGCGCTCGCGCGATGACCAGAGGGTGAGCGGCACGTGAGTCCTGAGGGGAAGCCGATGCGGCTCTGGGGCGGCCGGTTCGAAGGCGGCCCGGCGGACGCGCTCAC # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTGCGAGGGGCAGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-11.00,-11.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //