Array 1 183563-183797 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFLE01000003.1 Lachnoclostridium sp. An14 An14_contig_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 183563 33 97.0 33 ........................A........ GAAACCGGGTTGCGTTTGGAGGAAATCGTTTTG 183629 33 100.0 35 ................................. AATCTCAGCATGACCAGTTACCTCCCACCGCAGCT 183697 33 100.0 35 ................................. ATTGCAGTGATACCAGATATTTTCCAGAAAGGCAT 183765 33 97.0 0 .............................C... | ========== ====== ====== ====== ================================= =================================== ================== 4 33 98.5 35 GTCTCCCTTCGTGAGAAGGGAGTGGATTGAAAT # Left flank : GGTGCACGTTTTAAAGGGGGAATGTCCCGGATTCACCCGGCGGTGGAAAGAATGCTGTCAAAGGCAGGGGAGGTATTGTTAGATAGTGGTTGAAGGAAGTCGGAGACAACCCGTTGACCTGAGAAATACTCCCACCCCCGCAACTCCTTCTTGCACCTCCGGCTCCGCTTATGATACAATCAGTCTCAGAAAAACCACATTTCCACTTGTCTCCGCAGGAGGGAAACGCAGAGCGTTGCCAGTTGAATTGGGAACGACGAAAACTCTCACTCCCATTCATGATCCCGGAAGGGTTTGCGCCATAGCAGATTGAAACAGACTGCGCGGTGCGAATCCTAAGTGCACACAGAAACACCGGGAGATTCGCACCGGAGATGAATAGTGCAATTTGCGAAAAATATGGGCGCAAACAGATGAATTTGAGGGGGATAGAGAAGTGATACGGTCAATATGAATGATAAAATGAGGGAGAATGGGATGAAAAACTGGTAAAGGTTGCC # Right flank : GAGGTGTTGACGGCGTCTAAGTACATCACCAGTGACGTCTCTCTCTGTGAGAAACGAGTAGCTCAAAGAAATTCTACCATCAGAAAAGAAATCGCCTTGTAGCCGAGCTTTCCCTCCATACAAAGAAAAACCACAAACCAAGCCAATTTCTAATTTAAAAAAATTTTCAGAAAAACGTTCATTGTTTCCACTGACAATCATTTTATGCCATCCTGTAACACATTTTATGCCTACCCTCGCACACGACAAACGCACGAATGAACAAATTATGAACATCCGTCTTTTTTCTGGTATACTAAAAGAAAAAAGGATGGGATGTTATGAAAGAAGTGTTAGATTTTGTAAGTACGGTGACGGAT # Questionable array : NO Score: 8.79 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCCTTCGTGAGAAGGGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: F [matched GTCTCCCCTCGCGAGAGGGGAGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.80,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: F [61.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 959-389 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFLE01000053.1 Lachnoclostridium sp. An14 An14_contig_53, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 958 33 93.9 36 ...............................GA CTCCCTCTGCTACCCAGGTGGCCTCCGCCTTAACAC 889 33 93.9 34 ...............................GA TGCATATGGACGAATGCAGGCTCTCACAATGTCG 822 33 100.0 33 ................................. ATGGTATGCCGTATCATATGTTGACCGTGACCA 756 33 100.0 35 ................................. ATGGTGGTTTTCAGGCTTTCCATTCCCGGAAGTTC 688 33 100.0 33 ................................. GTCACTCCAGACGGCGGATCATGCAAAAGAAGT 622 33 100.0 34 ................................. AAAACAGACGCTCAAAGAGAGAAAGAGGCAGAAA 555 33 100.0 33 ................................. TGATACCTCTGCAATGTGGTCCTGCTGTTTAAC 489 33 100.0 33 ................................. TCTATGCCAAATAATCCGCCTCGTGCAGAATGT 423 33 93.9 0 ...............................TC | A,G [394,403] ========== ====== ====== ====== ================================= ==================================== ================== 9 33 98.0 34 GTCTCCCCTCGTGAGAGGGGAGTGGATTGAAAT # Left flank : AATGGACAGCGTTGTGCGAAGTTTCTCGAAAGAACCGGAGGAACGGAGAACACTTACGGTGATTAAGAAGAAACTGGGAGTTCTGGATAATGCAGCTAGATGTAGGGGATAGAGGGGGGACCGCAAGAAGTTTGGAGTGGCGTCAACGCTTAATAGAACCGTCTTGTGTTTCAGTGGCACAGGTTATATAATGAAAGAAGGGATCAAAAGGATGAGAGTGCTTTGGCGATTGGTCCTGTATGAGATTCCTTTTTGAATGACTGGAATGCAAGGCGGAAAGCGGATCGGTAAGAGGATAAAAAGCAACCTGTGATTGAAATATTAGGAAGTGCGAATCCTAAGCGCACATAAAAATACCGGTAGATTCGCACTGGAAATGAAGGATGTAATTTGCAAAAACCAAAAAGAAGTCAGGATAATTTCAGATCAGTAGAGGAAGTGATTGTGAAGATTGCATAATGGATTTGAGGTGGAGAGATTGAAAATTGGCGGTTTTTGCT # Right flank : CTTGCCGCGATGCGACCCGCCAGACAGGTCTTGGTCTTCCTTCGCGAGAAACAAGAATCTTAAACAAACAGAGCAAGCTGCCGCCTGCATTGTGTCCTAAATCTCCATTTTTCGTGGTGGAACGTGGCCACGAAAATGAGAGTGACAGGATTACAAGAACACATTTCACGGAATACATTTCCATAAGAAAAAACGGTTGACAGAAACGAATCGCCATACTATATTAAATACAACAAACATTTTTCAGTAAAACATAAAAAATAAACAAAAATTTAACCTAAATTATTCACGGAACAGTATCTGAATTGATAACAGTACCATGAATCTGAAAATTGATCCATGCAGCCATAACATCACTCAATTAACCCGTCAAAAGGGTATAAAATCCC # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCCCTCGTGAGAGGGGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTCCCCTCGCGAGAGGGGAGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.60,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 8487-8856 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFLE01000051.1 Lachnoclostridium sp. An14 An14_contig_51, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 8487 33 100.0 33 ................................. ATGAACCCGCTTGATGTAGCGGATTACCTGGCT 8553 33 100.0 36 ................................. TAATCGTCAGGGATGAAAATGGATTTCCAGAACAGC 8622 33 100.0 35 ................................. ATGATACATAACGTGAGGACATCCGCCAGTGGTGA 8690 33 100.0 33 ................................. ATTGAACGTTTTTGTAAACTCCCTACAGGAAAA 8756 33 100.0 35 ................................. GTTCCGTCCAGCTGTGAAAAATTAAACTGCTCCAG 8824 33 84.8 0 ..........G...........CA...C....G | ========== ====== ====== ====== ================================= ==================================== ================== 6 33 97.5 35 GTCTCCCCTCATGAGAGGGGAGTGGATTGAAAT # Left flank : CTGGGCGGACCCGGTTGAGAAAGGTGGCAAAACAGTGTGTAAACTATGGCCAACGGGTACAAAATTCCGTGTTTGAGTGTAACTTAGACGCCGCAAAGTGCAGGCAGGTGAAGGCGATTTTGGAGGACATTATTGATAAGGAAAAAGATAGCCTGCGGTTTTATTATCTGGGAGATAAGTATAAAAATAAAGTGGAACACATTGGGGCCAAGCCCGGATTTGATGTGACAGATCCGCTGATTTTTTAGTGGATGGAGCGTTTTAAAACGAGGAGAAAATAGCCTGAAAAATTGTGTAAGGAAGATGATTCTCAACACGTACGATATGGTGCGAATCACAAGTGCACATAAAAACGCTGGGGGATTCGCACCGGAAACGGATTGTGCAGGTTGTGAAAATGGCGTGGTAAATATTGAGGTTTTGGGGATTGGGAGAAGGGGATTTGGGTGATTTGTGTGAAATGTTTGGAGAAGTGGGGTGGTGAATTGGTGATTTTTGCT # Right flank : GACTGCATTGCGTTGGTACTGTTTTGGCCATTGTCGGTGTATGGCGATTGAAAGGCCGCGCGAGCGTTTCGGAGGCAGGGAAAAGAGATGTGGGATGTAGAAAACAGAATCAGCTATTTTGTGATGACAGTATTTGCCGCCCTGGTTATGACGTTTGCCTGGGTATGGTTGTGTTTCGCTTTGATATGAGTTGAGGTGCGATGGAGCCGGGTCTCCAATTCTCCAACGCCTCAACAACAGAACACAGCCCTAATTTTGCGGAAGTCATTGAACAATTCGCAGAGTATTAAATATCAAATTTGAAACATTATCAATGGTATGTTACGATCTATAAAAGGTTCGGCAATGTTATGTAAACAAAGAATAGTATACAGTCAAACAAGGCATATCTATGCCGAACAAACCATCCGTTTCGTAAAACACATATCTAAAACCATCACGATTACAAAAAAACGACACAGCAAAATAAAAAAAGAGCCTAGCCCCAGCCACAAATGTAC # Questionable array : NO Score: 9.14 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCCCTCATGAGAGGGGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTCCCCTCGCGAGAGGGGAGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.40,-8.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 20617-20846 **** Predicted by CRISPRDetect 2.4 *** >NZ_NFLE01000051.1 Lachnoclostridium sp. An14 An14_contig_51, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 20617 32 100.0 34 ................................ GACCCGGATATTATATTCCGGGTGACAAAGACAG 20683 32 100.0 35 ................................ ATCTCCTCTGTGTAGATGTCCATAACGGCCTTCGC 20750 32 100.0 33 ................................ ACTTCATCCAGAAGAACTGCCATCTCGTCACCC 20815 32 87.5 0 ....................A.AC...A.... | ========== ====== ====== ====== ================================ =================================== ================== 4 32 96.9 34 GTCGCTCCCGGTGAGGGAGCGTGGATTGAAAT # Left flank : AAAAGACTTCAGGCCCAGAAGAAGAAAAACAACGTGATTCTTCTCGGGGGATATAAAGGACTCCTCCATTCCATTTTGCTGGAAGGGAAACAACGTGGGGAGGACTGCACCAATGGCAGCCTGTTCCTTGACCGGGAAACGGGGCTGCCCCATGGGCTGGTGGAGCTGTCTGTCCGCGGGGAACCGCAGATTTCATGAGGAAACCGAAAATAGACCCCTGTCGGCGAAAGACGATCTGTTACCAGAAAAACCGTTGGCGTAAGTCGGAACATACGGCTACCGGTAAGGCACTGCGTTTTGGCGAAACACACAAACCCGAAACGCTCCAGTGCGAATCCCAAGCACCCATAAATCCCCAGAGGGATTCGCACTGGAAATGGGAAAGTAAGATGGAAAATTATGAGGGGGTTTGGAGGAATGGGATTGTATTGTGAGGATGGAAACGGTATAATTGCGTAAAAAGAGAGAGGGAAATGGAAGAAAAATTAGGGGATTTTGCT # Right flank : TGCAAAAAATTCCATTTCTCTGTATCCGAATCCCTTCTCATTTCGTTATACCTATATAGAGGCCGTCACAGCCTTTGGAAGGAACGGAAAGAGAATGCTGTCATTTTACGCGTCATTGATGGATACGGAGGACCGGCGAGGCCGGTTTGAGAAACTGTACAGAGAAAACCGCGGCCGGATGCTGTCCGCGGCCGCCTCGAAAGGGGAAAACGAGCTGCTGGAAGTAGAAATGAACCATACCCATGCCCTGCCCCCCGCGCCTCCCGCAGTGGAATGGCCTCCTGCCGCTGTTTGCGCCCCCGCAGGCTCCCGCCGCGTCCGTTGGCTGTTTTCTATCACTCCGGTGTTGATCTTCGTCCTCACCTTCACCGTAGCTGCTACCATGTACCGGCAGCTCTATCCCGCCCATTACGGAGTTTCCCTTCCAGGGGCTGTTTCCGCCTCGTCCCAGCCAGTCACCGCCTGGGCTGAGGCCTTCTGCGCCCGGGATGGACAGGCGC # Questionable array : NO Score: 8.71 # Score Detail : 1:0, 2:3, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCGGTGAGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.90,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //