Array 1 287096-285988 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUNF01000002.1 Algoriphagus antarcticus strain DSM 15986 Ga0196854_102, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 287095 46 100.0 29 .............................................. CTTATACTCTGTATTAATTCGGTTATGCT 287020 46 100.0 30 .............................................. GTTGCCCGTGAAAGTGAAGACCTGTGCGGT 286944 46 100.0 30 .............................................. TTTGGTTACATACATAGAGTTAATCACATC 286868 46 100.0 30 .............................................. CGGTATCTGTTTTATTGATCTTTTTAGTTA 286792 46 100.0 30 .............................................. TGGAAGCCTTCGCTTGATAGGGCTGGGAAT 286716 46 100.0 30 .............................................. CCTGGGGGAAATGACAGCTTTGACGGATTG 286640 46 100.0 30 .............................................. TATTTACAGAACGATTTAAACATAACCCCT 286564 46 100.0 30 .............................................. TTGGATAGGTTGATTCGGAAAGGCTTAAGT 286488 46 100.0 30 .............................................. CGTTCTCTATTTCCTTAAGGCGCCGGGTTA 286412 46 100.0 30 .............................................. GATTTAACAATCCAGCCGCAAAAAGAGCAT 286336 46 100.0 30 .............................................. CCAATAGGGAAACGTCTCCACATCCTCCAT 286260 46 100.0 30 .............................................. TACTGTATCTTTGCAATCTTTTTTGGTGTC 286184 46 100.0 30 .............................................. TCCTGCCGAGTGGATGTGGACTCCCTTCTG 286108 46 100.0 29 .............................................. ACCATAGCACGCGCGACACGCGCGCGCTA 286033 46 95.7 0 T............................................T | ========== ====== ====== ====== ============================================== ============================== ================== 15 46 99.7 30 GCTGTGATTTCCACTGGAAAGATACATTTTGAAAGCAATTCACAAC # Left flank : CTGGCAATCATTTATAATAGTCTAGTAATAATACTTTTTCTTGCAGTAAGGATATTACAAAACCCTATTTTTTTCAATTCCCAAGTGTTTTATTGTGAAAGACTGGAAGATTTTTATGCCAATGTATTCCAAAAAAAAAACCGCCATTGAAAGACGGTTTTTGTACACAAAATATTTTTTAACCTATAATAAAGATACCACCTATGGCAAGTACCTCATCCATTGTTAATGGTTCGTCAAACGCTTCTGTAAGCGCATCGTCTCCTCCAAAATTAGCAAACATTCCTGCTAAATTAACGCCACCCTGAACTTTGTCTGATTCAGGCGTTGCGCCTCCATAAACAGCTGCAAATGCTGCTGGTAATGTGTTTTCAGATTGCGTAATCCACCCTTTTTCATCACGCATCCGTCTTACCTGAGCCGCATGTCTCGCTTCTACAGAATGAATTTGCAAAGCATACTGCAATAAGGCATTGTCATTGGCTAAAGCACCAGCTTGT # Right flank : TGACTAGACCTGACTAGTTTGTTTCGTACCTACCAAAGACTCCACGATTTCCTTCAATCGCACCTTATCGGAATTGAAACCAAGGAACGCTATGATAGACTACACTGAGAAAGGGACTTTCTTTCTTAGCCTCCGAAATTACCTAGCATACCAACATCAACCATGTGATTATCAAATATCTGTTCGGATCGCAAGCCTAACTGGGAATGGGGCGAAATAGGATTAGCTGGTTAGGGATGGGTTCGCTTCTGATATTTTCCCAACCAATACAAGCCTGTTCCAATCCCAATCAAAACCGCAGTGAGCCAAATGGAGGTCCAACTCACCTGAAGCATCAGCCAAAGGCAAGCTGAAATCCCCAGTATTGGAATGAGGTAGCCGCCTTTGAGTATGAAGTAGCCCTGGTCACGAAATCTTGGTCTCAGAACCGGAATCGCTGCACAGGTCATAATAAAAAGAAATAATCGGGACAATACTGTCATGGCGGCCAAGAAGGTAAA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGTGATTTCCACTGGAAAGATACATTTTGAAAGCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.04%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.60,-2.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 294465-290475 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUNF01000002.1 Algoriphagus antarcticus strain DSM 15986 Ga0196854_102, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 294464 46 100.0 30 .............................................. GGTCTTTGCTTCCAACATGTAAGCCTTTGC 294388 46 100.0 29 .............................................. AAGTCGCCGAAAGTTGGCCTAAAACTTTC 294313 46 100.0 30 .............................................. TGGATCCCTGCATCCTCACGATGGATATGG 294237 46 100.0 30 .............................................. CGGGTGGCTATTCACGATCAACCCTTCGAA 294161 46 100.0 29 .............................................. ATTCTACATGAACAAGACAATAGGAGAAG 294086 46 100.0 30 .............................................. TAAGGAGGGGAAACCAATTTGCCAAAGCCA 294010 46 100.0 29 .............................................. ACGCTATTTATTATCTGTTTTTTTTTTAT 293935 46 100.0 30 .............................................. ACCTTCTTTGACAGCTAGGCGCATACGTGA 293859 46 100.0 30 .............................................. TACTGATGTCTACGAAGATGATCAAACAGC 293783 46 100.0 30 .............................................. GGATCGGATCTTGAGCTTTACAGAATGCCA 293707 46 100.0 30 .............................................. TGTACTTAAGAACATTGTCTCCACGAATAT 293631 46 100.0 30 .............................................. AAAGGCGAACTTCAACCCCTAAAACAAAGG 293555 46 100.0 30 .............................................. TCTTCAATTCGGCATTTACGAGAACATGGG 293479 46 100.0 30 .............................................. AATGATCCGTACCGAGGCAAATCTAGGGGC 293403 46 100.0 30 .............................................. CCTGGTCAAGCGTTGGAATATTCTTTGTTG 293327 46 100.0 30 .............................................. TAAGGACAAAACGGTTTTCATTTTATGAAA 293251 46 100.0 30 .............................................. GGTTGAAAAGACACACTCCATTTTTTAAAA 293175 46 100.0 30 .............................................. TCTATCAACTAAAGATCTGGATGGAAGATA 293099 46 100.0 29 .............................................. CCTGCCATGATTGAAAATACTTCTGTTCA 293024 46 100.0 30 .............................................. TGGTTTGGCTTCTCGGTCGCTCTGTCGCTG 292948 46 100.0 30 .............................................. TAGAGAATGAAGGGGCTAAAGGATTCATTA 292872 46 100.0 30 .............................................. ACCTTAAACCACACGCTGAAAAGGATTTCT 292796 46 100.0 30 .............................................. AAGATTCGGTTGATTATGAAAGCAGTCAGG 292720 46 100.0 30 .............................................. CCTTACTACAATAACAACCGCAGGGGCGAT 292644 46 100.0 30 .............................................. GAACGGTCTTACAGGCCATTTCATCCGTGA 292568 46 100.0 29 .............................................. CATTGGACAATTCCTTTGCGTATTTAATG 292493 46 100.0 30 .............................................. TTACCGTGTTGCCTGAATCCTGCTGAAGCT 292417 46 100.0 30 .............................................. TGAGGCGACCAAAGTGCCAGCAACTGCAAA 292341 46 100.0 29 .............................................. GATAACTCATTGATGCAGAGCAGGCCGTT 292266 46 100.0 30 .............................................. GCAATTTTATTTTCATCTTTCAAGAACCCT 292190 46 100.0 30 .............................................. AAGAAAGACCCACAAGATTTGGGCAGAGTA 292114 46 100.0 30 .............................................. ATATAAACGTGTTAGGTGCAATGCCAGCGG 292038 46 100.0 30 .............................................. AGCTGTCTATTCTTTCCAACACCGTTATTT 291962 46 100.0 30 .............................................. TACAGATGTGCGCTCAGCACCTTCCATAAA 291886 46 100.0 30 .............................................. GTAAAGACCCTATTCCTAGTAAGTCGTTCC 291810 46 100.0 30 .............................................. ACGGAACACACCTCGATGCATCAGCCATGC 291734 46 100.0 30 .............................................. GGATAAAAACTTTAAATACTTCTTGAGATT 291658 46 100.0 30 .............................................. AACAATAATGTTCTATAACACCCCATAGAA 291582 46 100.0 30 .............................................. AAGGTGCTCGCGCGGATGCAATAGGTCAGC 291506 46 100.0 30 .............................................. GAGATGTGCAGCAGTCCGGAGAAGCGCAGC 291430 46 100.0 30 .............................................. TATGAATATGTACGTACGTTCTACCATGTT 291354 46 100.0 30 .............................................. TGATATAACCTTTTTCCTTCAATCGCTTCA 291278 46 100.0 30 .............................................. CACTTTTTTACAGTTCTTTTTTTGCTTTTT 291202 46 100.0 30 .............................................. GCGTGCTGGTGTCTATCGTGGTTCAAGTGG 291126 46 100.0 30 .............................................. CGAAAGTTTTGACGCGATCCATCTGATAGT 291050 46 100.0 30 .............................................. GGCTTCTTATTCAATACCGATAATCCAAAC 290974 46 100.0 30 .............................................. TTTGACTGCCAAGCTGGGAACGGATAGTAC 290898 46 100.0 30 .............................................. CTGCCTCTTCTATTGCTTATCCCCTATTTG 290822 46 100.0 30 .............................................. ATACTAGTATTATTGGGTAAAGATTCTTTA 290746 46 100.0 29 .............................................. CTGTGGTAGTAGAATGTTTTGGTTTAACA 290671 46 100.0 30 .............................................. TAGCGACAGGAAAGTATGAAAGTTATTTTC 290595 46 100.0 29 .............................................. ATAGAACATTCGAATCGTTTTGCGTACCT 290520 46 95.7 0 .............T..........T..................... | ========== ====== ====== ====== ============================================== ============================== ================== 53 46 99.9 30 GCTGTGATTTCCACTGGAAAGATACATTTTGAAAGCAATTCACAAC # Left flank : GGAATATGCATGAGAATTATTATTCAAGGCTTAATCAATATCGAAGTTTGTGGGTCTTAGTATTTTTTGATCTGCCCACCGAGACGAAAAAAGATAGAAAAATCGCTTCATCTTTTCGTAAGAAATTACTTGATGATGGATTTGCAATGTTTCAGTTTTCGATCTATATGCGATTCTGTGCCAGTCGAGAAAATGCCGAAGTGCATACACGCAGGGTAAGGATAAATCTCCCACCAAAGGGGAAGGTGGGTATTATGCAGATTACAGATCGACAGTTTGGGATGATGGAATTATTTCATGGGAAAACTATTGCAGAGAAGGAACAACCCGTTCAGCAGTTAGAACTTTTTTAGATTGTCTGTAAACTTTTCTAATCCACCTCGGAGGATTGGAAAAGATAATGCCGGGTTAGCACAGGTATAGAGCACCAAAAGACCCAATTTTTATTTTCCTAAAAACGAGCATAAAAAACAGCATACCAGCCACTTAGCGTGGGGTAT # Right flank : TGCTCGCCATTATTTTATTGAAAAGATCTGAATTTTTAAAACCAATTTTTTACTATCTTCAGTTTCTAATCCATTAAAAATGAAACTCTTGGCTATGACATTACAGCAACTAATCAGACCCCTTTTCAAATTCCTACTTTTTAATTTTGTTACATTTTTCACGCTATCTGCCAACGCCCAATTTCAAATTGTAGGGATGCAATTTAATGGGAATTCTGCAGATGCTGTCAATTTAACAATCATTGCCCCAAACGGAACGCCATTTACGGGCATTGTTCCTTATGATCAAAGTAAACCTTACAATTCAGGAACAACATTCAAAACTCCAGCTAACACGTCAATCGCTATTCTTTATAAAGGGCAGACGCAAATCATGGACCCCAATTCTGTGCTAAAAGTAAGTATCGTCAAAAACGGTGTGGTGGCGCAGACGTTGACGGGCCGGGTGAAGCACGTGCTTAAGGATGTCAAGTCAAAACTTGGTTTTTATAAAGCGGGCA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGTGATTTCCACTGGAAAGATACATTTTGAAAGCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.04%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.60,-2.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //