Array 1 4433-5180 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAER01000110.1 Paraglaciecola polaris LMG 21857, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 4433 28 100.0 32 ............................ ATCACTTGCCGTCCAAATTAATTCGCCAAACC 4493 28 100.0 32 ............................ ATTCATGTTTTCGCCCTTAGCTATTTATTGAA 4553 28 100.0 32 ............................ CTCATTACGCCATAGCCACAAACGCCCAATGA 4613 28 100.0 32 ............................ AAGCAAGCGGCGCGTTTAATATTGGCGCGTTT 4673 28 100.0 32 ............................ TGCGATTGCTACATCAATTAGATTCATCTATC 4733 28 100.0 32 ............................ GCTTTTGGCGGTATACGTGCGGGGGCCAATGA 4793 28 100.0 32 ............................ ATTAGAAAAATATCAATTGGCTCTATGCGTAG 4853 28 100.0 32 ............................ AATCGCCTGCACTTTGCGCCGCGTCTTTAAAC 4913 28 100.0 32 ............................ GCAAGCTTTCGTTAATCGGGTTTAGCTCCAAG 4973 28 100.0 32 ............................ AGGCATACATCAAAAAGCCGACAGCGCAGGCA 5033 28 100.0 32 ............................ GTAACATGGCCGTTGGCAATGTTTACGGTTAA 5093 28 100.0 32 ............................ TCCTCTGAGGCCAGTACAAAGCACTCAATATC 5153 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 13 28 100.0 32 GTTCGCTGCCGCACAGGCAGCTTAGAAA # Left flank : CGTTTAGACATACATAAATGGTTGAGTCGCTTGACTGATTACGTACATATCAAGCAGATCGCTGATGTCCCTGATGTTGTCTTAGGTTACGAAAACTTTAATCGTCGTCAAAAATCAGGCAGCCCAGACAAACATATTAGACGACGAATGAAACGGCATAACGAAACCGTCGAGCAAGCCAATCTTTACTTTAAAGATTACGCAATGAAAGATGAGGATAAAGCCTTACCCTTCATTCGCATGAAAAGCCTTGAAAGTAATAAGGACTTTAATATGAGTATTTTACGAAAAGAGGTAAAGCAGGGGGCGAAGCAAGTGATGTTTAATACCTACGGTTTTAACGGAAGTGCTTTATTACCCAAGTTTTAACCTTTAATTTTTAGCTCTTTAAAAATCTCTTATAAAACAATGCGCTACAACAATCCCTAAAATCATTGGGTAAAACCCCAATTTTTACCTAAGTTTTTGTTGTAGCTCTTTTTTTGTCTGATAAGCTTCAG # Right flank : TTTAATTTTCCCCAAGCGCGGCATGGTGGGTGGTTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 815-4 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAER01000105.1 Paraglaciecola polaris LMG 21857, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 814 28 100.0 32 ............................ GTGCCTGAGGTCTCCATGTATGTTCCCATCTC 754 28 100.0 32 ............................ AACTGAGAACATGCGTAAAGCAACATATCTGG 694 28 100.0 32 ............................ ATGCAATACAAAACGGTGATCCCGTTTGGCGG 634 28 100.0 32 ............................ TATTGTTCTTTTACGACAAGAAAGACAGTTCT 574 28 100.0 32 ............................ AACATACAACAATCGTTTGTTGATAACTCTGA 514 28 100.0 31 ............................ TTAAGTTTCAACGATGATTGCCGGGTCTTGG 455 28 100.0 32 ............................ ATTAGCTTTTCAGTATTCAGCTTGTCGTTTTG 395 28 100.0 32 ............................ GAAGAAGCTCTTAAGGTGGTGTCATGAGTAAC 335 28 100.0 32 ............................ AGTATAGGCAATGAGTCTGCTTTGTCAGCAAT 275 28 100.0 33 ............................ CCATCAAATCGAATAGCCAATACTGTAGGACTG 214 28 100.0 32 ............................ TCATATAGCGATATATGAGGCTTTTTAAACAT 154 28 100.0 34 ............................ TTGATACATCATCACCACCAACGCGAACGCTGGT 92 28 92.9 33 ........................AG.. AAGTTAGGAAAATATGCGAAACTATACTTGAAC 31 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 14 28 99.5 32 GTTCGCTGCCGCACAGGCAGCTTAGAAA # Left flank : | # Right flank : ATAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [5.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 30515-29948 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAER01000057.1 Paraglaciecola polaris LMG 21857, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 30514 28 100.0 32 ............................ TAGCTGTAATGGTTCGTGGTGACGCTATCCTA 30454 28 100.0 32 ............................ TTTGGCGCTAAAGTTTCAGCGTCTAATTCTTA 30394 28 100.0 31 ............................ ATAGACGCAAGATATGCCCAGTTTGCTTTTG 30335 28 100.0 32 ............................ TATGCTCATCACGCTAATAACCGCAATCGCAC 30275 28 100.0 32 ............................ CTTAAAGCCGCGCTGTTAAGCGGCGGCAACTG 30215 28 100.0 32 ............................ TTTCCCGCTGCGATTTCAGCGCCTATCAACGC 30155 28 96.4 32 A........................... TTCTACATTGAGCGTCCTAAACTCAAATGCAG 30095 28 100.0 32 ............................ TTGGTGCGCCGATGAAATGGTGACATATGGTG 30035 28 100.0 32 ............................ TTTCACAAAGAAACCCATTTCTATGGGTAATA 29975 28 89.3 0 ....................TA..C... | ========== ====== ====== ====== ============================ ================================ ================== 10 28 98.6 32 GTTCGCTGCCGCACAGGCAGCTTAGAAA # Left flank : GGATGCAGACTTGTTACTAGCATCT # Right flank : ACGTGAGGTGCTATTTCCTGAGCAAGCATGTTAATTTAGTCTCAGGCGTTACAGTCATATACGCAACACCGCTGCCTTCATTTAGTCATAAGAGTAAACACCTTGCCGTCAAAAATACAACTTAGCAAAGACGATCTTCGAAAAAACAAACCGAGCCGTGATGAATACCTAAGCAAGAGCAAAATCCCGTTAGTGGTGGTGTTAGACAATGTTACCAATAGCTACAATATCGGTTCTTTTATTCGCTTGGCTGATGCCTTTGGGATTGAAAAAGTGATTGTTTGCGGGGCGTTGACCATATCCGATAAAAAATTTAAAAAAGCCTCAAGAAATGAAGCTAAATGGGTGCGTGTTGAATATAGCGATAGCACAACGGCAAGTTTGCAAACCTTGTTAGATGCGGGTTATGGCATCTACAGTGTTGAGTTATGCCAAGCGTCTGTGGATTATAGCCAGATTGCTTACCCTTCACCTTGTGTTTTAGTGTTAGGCAATGAACG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //