Array 1 10029-9268 **** Predicted by CRISPRDetect 2.4 *** >NZ_LXKH01000032.1 Streptobacillus moniliformis strain IKC1 contig_69, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 10028 36 100.0 30 .................................... TTGATTTCAAGTCTGAAAATGGAAAAGTAT 9962 36 100.0 30 .................................... TGAAGAAATGGTATATCAAATGACAATTAA 9896 36 100.0 30 .................................... ATTATGAAAACCAAAGACAGGAAGATGTTT 9830 36 100.0 30 .................................... CTCCCAATACCACTTAAGAGATGTACGTCC 9764 36 100.0 30 .................................... GCATTCTTCCTTTTTAATTTCAAAAGAATA 9698 36 100.0 29 .................................... TCCTCTGATGGCTTATAATCTGATTTTTA 9633 36 100.0 30 .................................... ATTTCTAACTGCAGCAGTAGATGATTATCA 9567 36 100.0 30 .................................... ATTCTTCTTTATTCCTATATTCTTTTGATA 9501 36 100.0 30 .................................... TAAAAGAATTACCTAAACATGCTTTAGGGT 9435 36 100.0 30 .................................... AAATGGTCTGTCTTTAGAATATGCAAGCGA 9369 36 100.0 30 .................................... TTTTTTAAAAAAAAAGGCTTAAAAATCTGA 9303 36 77.8 0 .............AC.......A...G..T.TTG.. | ========== ====== ====== ====== ==================================== ============================== ================== 12 36 98.1 30 GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Left flank : TTTGTGATACATGATACAGATTCTTGGTAAATTTGAATAATGTGAATGTAAATAACATGAGGACAAAACCGAGATATAGATACAGATTCTTGGTAAATTTGAATAATGTGAATGTTTCAAAAGGTTTAGTCTTTAATGCTACATGATACAGATTCTTGGTAAATTTGAATAATGTGAATGTTAATAAAGAAGGTAATGAATTGAAAAAAGGATACAGATTCTTGGTAAATTTGAATAATGTGAATGAATTTGGAAGAGAAGTAGGTTTGACAATAGGATACAGATTCTTGGTAAATTTGAATAATGTGAATGAAAAAATATTTGGTTGGAGAGGAATATACGGATACAGATTCTTGGTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTGAATAATGTGAATGGAACGTCTAACAAATTGGCCAATTCTGGGG # Right flank : TTGACTTTTTTAAATATTATGCTATAATAATTGTGTAGATAAGATTCACATTATTCAAGTTTACTACAGATTCTGTATTAAGATACAAAATCGTAAGACTGGCTGCCTTAAGCAGCTTTTTTTATTTTAAATAATTCTTAATTATGTCAAATTCTTTTTCTTTTCGGATTTTCTCTATTTTATTTTCTATTTCTTTTTCTGAATAAAGGTATACTTCATCAATAAAATTAATATATCTAGGTAACTCAACTAGTTTGTTATTATCAATAAATAATACTTTGTGTCCACTAGAAACTAATTCATATACTATATCTTCATTTTTCACAAAAAATATACATTTTGTATTGAAATCCTTTATTTTAGATAATATATATGATACTTTTTCAAAAAATTTATTCTTAGTATAAATACTATCAAAATCATCAATCAATAATACAGTGTTATCATTTACACTAATTAATCTATTTAAATATATTTCAAGTTGTATATTTACTTTTTCA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 2 10846-10217 **** Predicted by CRISPRDetect 2.4 *** >NZ_LXKH01000032.1 Streptobacillus moniliformis strain IKC1 contig_69, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 10845 36 100.0 29 .................................... GAACTTTACAACAACTTTACCTAACATAA 10780 36 100.0 30 .................................... TTTGTATTCTAATTTTGTTTGTGCTAACAA 10714 36 100.0 30 .................................... TAATAGTTATTAATCAAAATTTGAAAGAAT 10648 36 100.0 30 .................................... TTTAATCTCAGAACCTTTTAGTAATGCTCT 10582 36 100.0 30 .................................... TAAATATGTTATATTATCTTTGTGATACAT 10516 36 100.0 30 .................................... TAAATAACATGAGGACAAAACCGAGATATA 10450 36 100.0 30 .................................... TTTCAAAAGGTTTAGTCTTTAATGCTACAT 10384 36 100.0 30 .................................... TTAATAAAGAAGGTAATGAATTGAAAAAAG 10318 36 100.0 30 .................................... AATTTGGAAGAGAAGTAGGTTTGACAATAG 10252 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 10 36 100.0 30 GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Left flank : AAAAGTTATCTAAACTTTTTAGAAGAAGGTAATGAAATGCTGGCTATACCTGAAATAATAAAAATAGATTTTTATGACCTTTTTAAAGAGTTATAGAGAAATGAGATTACTTGTTTACTTTGATTTGCCAGTATCAACTAAATTAGAAAGAAAACAAGCTCAGGATTTTAGAAAAAATTTGTTATCTGAAGGATTTATTATGATGCAATTTTCTTGCTATTCAAGATTTTGCAGAAATGATGCTGAATCTTCAAAATATTTTAATAGAGTAAAAAAATTGAGTAATAAATTAAGTGGTGGAGAAGTAAGAATTTTAAAAATTACTAACAAACAATATGAAAATATGTTAATATTAGTAAAAGAACCTAAATTATCTGAAATAAAGCTTTCAAAAAATCCATTGGTTATTTTTTAGTGTGAATTTTGTGCTAATGGATTGATTATTTAAATTTCAAACTGTATTTTCTAGCAATAAAATTATATTAATTTCATTGCTAGAG # Right flank : AAAAAATATTTGGTTGGAGAGGAATATACGGATACAGATTCTTGGTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTGAATAATGTGAATGGAACGTCTAACAAATTGGCCAATTCTGGGGGATACAGATTCTTGGTAAATTTGAATAATGTGAATGTTGATTTCAAGTCTGAAAATGGAAAAGTATGATACAGATTCTTGGTAAATTTGAATAATGTGAATGTGAAGAAATGGTATATCAAATGACAATTAAGATACAGATTCTTGGTAAATTTGAATAATGTGAATGATTATGAAAACCAAAGACAGGAAGATGTTTGATACAGATTCTTGGTAAATTTGAATAATGTGAATGCTCCCAATACCACTTAAGAGATGTACGTCCGATACAGATTCTTGGTAAATTTGAATAATGTGAATGGCATTCTTCCTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA //