Array 1 2088717-2095589 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP047226.1 Moraxella osloensis strain YV1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2088717 28 100.0 32 ............................ TTGCGTCTGAAGCGGCCGACGTATGGCGATCC 2088777 28 100.0 32 ............................ GTTAGGCCAGTCGTTATATGACTGTTTGGATG 2088837 28 100.0 32 ............................ TTTTTAAGTTTGGCAAGTAAATGGCTTTGCTC 2088897 28 100.0 32 ............................ GGTAGCATAGAGGCAGAGGAAACCCTCAATTT 2088957 28 100.0 32 ............................ TTCCATGACATTTGGCGGCACTTGAATATCTA 2089017 28 100.0 32 ............................ TTGTTGGTTGCTGTTCCATGCTACAATCCCTA 2089077 28 100.0 32 ............................ TAATACACCCACAACCACAACTAGCGGCAGCC 2089137 28 100.0 32 ............................ GAAATGTTACTGCTGGGGTGGGTATTCACGAA 2089197 28 100.0 32 ............................ TTCTTCGATAAATTTTGCTGCATCTTCATCAT 2089257 28 100.0 32 ............................ ATTAGTAACAGTAAAGTTCCTTGGGTATTAGT 2089317 28 100.0 32 ............................ TTGATTTAGATGGATGTGTTTTGCCAAACGAA 2089377 28 100.0 32 ............................ TACTATCAAGCAGCCATAGCAGCGACGTACCA 2089437 28 100.0 33 ............................ ATACCTGCGTGCCCTGGGTGAGCACTCCTTTTT 2089498 28 100.0 32 ............................ TTGTATAACAGTTCATCGCCCGTTACCGTTTT 2089558 28 100.0 32 ............................ CACCGTTTTTGATAAATCAAATCGCAAAAACC 2089618 28 96.4 32 .............T.............. TGCGGTAACTTGCCATTTTTGACTAACACGAC 2089678 28 96.4 32 .............T.............. CCATAGCTATCCCCTTAGTTTGGCTTTACGCC 2089738 28 96.4 32 .............T.............. AAATCAAACCACATCAAAAACATTAGACAACA 2089798 28 96.4 32 .............T.............. AATCGTCCTGAACTCAAGTCGCTTGAGAGCAT 2089858 28 96.4 32 .............T.............. CACATAAAGCAAATCAAAATAGGTGACACCGT 2089918 28 96.4 32 .............T.............. AAGAGTTTAAAGACACTGATATTTTCCTAAAA 2089978 28 96.4 32 .............T.............. TACCATTATCACTAGCAATATGCAAATTGAGC 2090038 28 96.4 32 .............T.............. AGCCAAAGTCCATGCCATCAATCAGCATGAAG 2090098 28 96.4 32 .............T.............. CTGTTATGGGCGGTCAAGGTAACGAAACGTCA 2090158 28 96.4 32 .............T.............. TGATTGGTGGGATGGCCACACATTTGACCACG 2090218 28 96.4 32 .............T.............. TATATGATGCGTCGTTTCGCTATCCAAAAAGG 2090278 28 96.4 32 .............T.............. CATTGTCACCGCCTACCAAATCAAACCACATC 2090338 28 96.4 33 .............T.............. AACAAGGCTTGGCAAATATGCGGCAGGACTTGC 2090399 28 96.4 32 .............T.............. ATTGGCATCTTTTGGCATCTCGATATACCACC 2090459 28 96.4 32 .............T.............. ATTGTTATGCTCTCTCAACTCTAACCTGTCGA 2090519 28 96.4 33 .............T.............. ACCTTGACGCCTGTAAAATCAATTTCTAAATCA 2090580 28 96.4 32 .............T.............. AATTACCCAAAACCAATTTGATGCGCTCGTGT 2090640 28 96.4 32 .............T.............. ATCACAGCCGATGGACTTGCTCAAATTGCAGC 2090700 28 96.4 32 .............T.............. GACACATGCATTTACTAGATGCAAGTAGTTTT 2090760 28 96.4 32 .............T.............. TGATGCGCCACAAATGGAGCAGATAGAATTAC 2090820 28 96.4 32 .............T.............. CATAGCCACATTTGCGGGAGTCTTGGCGGTGT 2090880 28 100.0 32 ............................ TTTGACTATTTTTGCAGATATGGGACTTTTTG 2090940 28 100.0 32 ............................ GAAGCCAGTGAGAAGGCGGAAACGAGCCAAGA 2091000 28 100.0 32 ............................ ATCGCTGGCACGTCAACAAGCCTTTTTGCCAC 2091060 28 100.0 32 ............................ TTTTAAGTTTTAGCGAATAGAGAACAATATGT 2091120 28 100.0 32 ............................ AATAATGTGAGTACACCCATGAAAAAACTACT 2091180 28 100.0 32 ............................ AGTTGTTATAATTAGCTTGTCTCTCTTTAATT 2091240 28 100.0 33 ............................ TATTGGTGCAATAGTCAAGTGGTGCATAACTTT 2091301 28 100.0 32 ............................ CATCATGTAATAGCTTTTATATGGATTTTGTA 2091361 28 100.0 32 ............................ TCTCCATCTTGATACACTAAATTACGTTGTTG 2091421 28 100.0 32 ............................ ATAGATAAAGCTTGCTCCCATAATTCATGCGC 2091481 28 100.0 32 ............................ TAATGTAAACATTTAATTAAAATTTGAATGGT 2091541 28 100.0 32 ............................ GCTAGTTGTGCGTCTTTGTCAGCAATAACAGT 2091601 28 100.0 32 ............................ TTTATCAGTCATGACCGCAAAATCCCTTTTAC 2091661 28 100.0 32 ............................ AGCATTAGACGCTAATAACATCTCATTATATG 2091721 28 100.0 32 ............................ TTATTACCTTTAATTAGTAAGTCTTTATCCAA 2091781 28 100.0 32 ............................ TTGACTGTAACCGCTAATTGAAAAATCATAAT 2091841 28 100.0 32 ............................ AGCCATATTATTTGCAGACGCACAGGAGAAAC 2091901 28 100.0 32 ............................ ATAAGCGTATTAGCAGACAATTGGCTAAGTAT 2091961 28 100.0 32 ............................ TTTAACGACAGGACAGGATAGCACCTGATACT 2092021 28 100.0 32 ............................ TCCTTCATGTTGTCGTATGTTGCTTGCCAATC 2092081 28 100.0 32 ............................ ACTATCTGTTACCGCTAGACTGCAATAGCCTT 2092141 28 100.0 32 ............................ TATGAAACAAGGTGATAAGCAGTTATTTAGTT 2092201 28 100.0 32 ............................ ACAAGATGATGCACAGCCACTTAGCGAAGATG 2092261 28 100.0 32 ............................ AAACTCTTATTGCTTCCACTTCTGCATTGGTT 2092321 28 100.0 32 ............................ GATATCGAACAGATATTAGGCGGACAAGCTGC 2092381 28 100.0 32 ............................ TCATAATTTGCATTTTCTTCATCCATTGCAAA 2092441 28 100.0 32 ............................ TGTTGGTAGGCTACCGCTAATCTGCGCCTTCG 2092501 28 100.0 32 ............................ ACAAAATCAATGGCTTTATTCAACTTTGTGGC 2092561 28 100.0 32 ............................ GAAACGATTTACTCGAAGTCGCTGATTTTTTG 2092621 28 100.0 32 ............................ TATCATCAAAAATAATCAAACTTGGTTATCAT 2092681 28 100.0 32 ............................ AATGTCGGTGCAAAAGGTAAAGCGCAACCGCA 2092741 28 100.0 32 ............................ AGTCATGCAAATAGCAGTCGATTGCTACGTCT 2092801 28 100.0 32 ............................ AATGAGATTTAAAATAACCTGTTTTGGTGTAT 2092861 28 100.0 32 ............................ TGTAAAGAAAACTCATTACCACCAATTAAAAA 2092921 28 100.0 32 ............................ AACATAGACAATCTCATCACCATCAAATAAAA 2092981 28 100.0 32 ............................ CATTACCGCAACAAATGCCCGCATTATTGACG 2093041 28 100.0 32 ............................ AATCAGCAAATTTCACCTTTGCTTGCTCTCGG 2093101 28 100.0 32 ............................ TTACCTATGACTTACGGTGCATTGTGCGTGGG 2093161 28 100.0 32 ............................ GCAACAGGAAAAGCCGTAAGCGGTAGTAATGA 2093221 28 100.0 32 ............................ TTTGGTGCAGCAACCAGCAAGCTAATGACTAT 2093281 28 100.0 32 ............................ TGTAATGATAACTAGCTGGTTTTCGGCTTCAA 2093341 28 100.0 32 ............................ GCTACCAGCCCCCAGCCCCACGCGGGCAAAAT 2093401 28 100.0 32 ............................ AATAGCCTTAACCACTTTTACAATGGCGTTAC 2093461 28 100.0 32 ............................ ATATTCTAGCGTTATTTATATCAACAGTAAGT 2093521 28 100.0 32 ............................ TAATTGCGGGGATTTTCATTTCATCGGTTAAG 2093581 28 100.0 32 ............................ AAACAAAATTAAGAAAATGTTTAACCATACAC 2093641 28 100.0 32 ............................ GATACTCTACGGTGAGCGCGAGATTGGCGGTT 2093701 28 100.0 32 ............................ AAAGGCTAAATTGAGCGTTAGAGAGCAAATTG 2093761 28 100.0 32 ............................ AAAAGTAAACCCTAGTGATTTGCTAGGGCGGT 2093821 28 100.0 32 ............................ TAACTGTCAATAACTTTATCAAATATTTTTAA 2093881 28 100.0 32 ............................ TAGATATTTTAGGCAGTGAGCGTTTCACAGGC 2093941 28 100.0 32 ............................ CCTTACTTGTAAATACGTTTTTGCCAATCTTG 2094001 28 100.0 32 ............................ TGTTTGCGCTGCCGCATTTTGCCCAATGCCTA 2094061 28 96.4 32 .............T.............. ATGAATTAAAGAAAAAAGTTTTTGAACGTGAT 2094121 28 96.4 32 .............T.............. TTTGAAGGGTTTGAGCCTGCGCCATACCTTGA 2094181 28 96.4 32 .............T.............. ACTGCGACTGTTGACATCAACAACATGAGCGC 2094241 28 96.4 32 .............T.............. TTCTTTTTTTAGAGATTAACACATGGCAAAAC 2094301 28 96.4 32 .............T.............. AGCGGTAATAATACCCACTTGCGCCATAATCG 2094361 28 96.4 32 .............T.............. AAATCATTTTCAGCGCCATCATGGACTTCGAT 2094421 28 96.4 33 .............T.............. ATGATAGCCACCTGTAAAATCTGTTTTTGTACT 2094482 28 96.4 32 .............T.............. TTGAACATCATGCGCTGATTCGTAATGATAAA 2094542 28 96.4 32 .............T.............. AATTCAGTGGCATCGATACCGGTTTTGATATG 2094602 28 96.4 32 .............T.............. TTTTAATTTGCGGTTAAGGTCATGAGTGATTT 2094662 28 96.4 32 .............T.............. ACAAAATCTAGTGGCGGTTGCAAAGGTTGCGC 2094722 28 96.4 32 .............T.............. CAATAGGGGTGCTGTGTAGTCAGTAGGTTGAT 2094782 28 96.4 32 .............T.............. ATATTTAGCAATCGCGGCTTCATCGCGGACAA 2094842 28 96.4 32 .............T.............. TGCTGGGCACAGATAAGGCTTTGCTCTAAAGC 2094902 28 92.9 32 C............T.............. TGCACGTTGCGCTTGCCCTTGACTGGTGCAGC 2094962 28 96.4 32 .............T.............. AGTCGATTTCGTCAGCCATACTCATTGCAATA 2095022 28 96.4 32 .............T.............. AAACTTCTGACCCAATTCGCCTAGGTTTTTCA 2095082 28 96.4 32 .............T.............. ACTTTGTTGCTACTAGCATGCGCATGGCAGAT 2095142 28 96.4 32 .............T.............. AGTCTTTTTGTGAATCGTATATTTTGGCTTAA 2095202 28 96.4 32 .............T.............. ATCAGCGAGTCTAATTATTTTAGCGCCCACAA 2095262 28 96.4 32 .............T.............. ATGTGCTTATAGCGGTCTTGCCCGGTAAATAT 2095322 28 96.4 32 .............T.............. AATCGGTTGGTTATGGTTGTGTTGCCATAGTA 2095382 28 96.4 32 .............T.............. TTATACAAGAGCGCAGGATGAAACATCGCAGC 2095442 28 96.4 32 .............T.............. AACAAATTACCCGCGTTAAACGCTACAAACAC 2095502 28 96.4 32 .............T.............. TTAATAGCCGCCATTTGCTCCTCGTGCTTTGC 2095562 28 78.6 0 .............T........G.TTCT | ========== ====== ====== ====== ============================ ================================= ================== 115 28 98.3 32 ATTCACCGCCACACAGGCGGCTTAGAAA # Left flank : CGTTTGATAGATTATGTACATATCAAACGTATCCAGCCTGCACCCGAATTGCATGGGCATGTAGTGGTGAGACGTTACCGCTACAAGAATTTTGACAAAAAAGTGGCGGAGTTTGCCAACTTTAAGGGCATCAGTGATCAAGAAGCGTTGGCGCATTGTCTTGCCCATAAGCGTGCTATCAAACACTACCCTTTTATCACCCTAAAAAGTCAAACCACCCAAAATGACTATAAACTGTCAATTTGGCAAGAAGTGGCGAAGGATGAAAAAAGTGGCAGCTTGAATACCTATGGGATGAATAATCAATCAGATGCGGTAACCGTTCCCCACTGGTAATCAACCTTGCCGACAGACTATAAGGGTGAATAACCCTTATTTTTGACTCAATAAAAATAGGTATAAATTTCAATCAGTTATATCCAGGCAAAAAATGTAGGGTAAAAAGGGTATTTTTACTTGGTAAGCCTTGCTATAACTGCTTTTTTTGGGATAAAATTCTT # Right flank : TTAATTAGTAAAACAGTGAAGTTTATTTATTTTTACTAAAGTGACCAAAAACAAGTGGGTGTGAAATTAAAAGTCTTAAAAAAATGCGTGGTCACCAAATGGTCACCTTTTGGTCACCATTCAATTTCTGTAGTAAAAAAGGTGTCCAAAATCACAAAAGTGGTCAAATTATTTACTTCGCAAAAACCGCCCAAGCCCTTGATATCACTGCAATAAAAAAGCCCCAATCAATCGACTGGGGCTTTTGGAATATGGTAGGCATAATCTGACTCGAACAGACGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTATATGCCTAAAAGGGTCTAACAATCTACTTGTGTAAGTAGGAGTGCCATTTTACCAAAAAATTTTGCTTTTGCAAGTGGTTTTAATTTTTCCCTTCAATTTTTATTGCGCCATCTTCAGCTAAGTTTTCGTTAAGGTTAGGTTGTTTTAATACACTCAGCCACTTGGATATACCTCAGT # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCACCGCCACACAGGCGGCTTAGAAA # Alternate repeat : ATTCACCGCCACATAGGCGGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACCGCCACACAGGCGGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.70,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //