Array 1 49105-50058 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE952759.1 Aneurinibacillus aneurinilyticus ATCC 12856 Scaffold256, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 49105 29 100.0 36 ............................. TTTTTTGAAACCCTTTAAAACGGCCATCTGATAGCA 49170 29 100.0 35 ............................. ACATGAGGGATGGATGGGGCACTACGTTGAATAAG 49234 29 100.0 37 ............................. AAACGAACGCTCAACAATCTTGGCCCATCTGTCATTG 49300 29 100.0 39 ............................. CATTTATATTTGCATTAGTAAAAAATGCGGATTGGGTTA 49368 29 100.0 39 ............................. CGGTATCATACGGTCATTTTTGTTAATAGATATTTTTTG 49436 29 100.0 36 ............................. CAGCTTGTGCGAATTCCAACTCCGAGTTTGCATAGT 49501 29 100.0 36 ............................. TAGCTCTGGCAGCAGCCCGAGTGGGCTTGCTGTTTA 49566 29 100.0 38 ............................. AGTTCTCAGTAGCTTCATTTGCTTTAGATGGTGCATTT 49633 29 100.0 36 ............................. GGAATTCGTTGTATGCGATACTCTTCCGCCCGCCTT 49698 29 100.0 37 ............................. TTGAATCTTATAGGCATCATCAGAATCTGTATCTCTG 49764 29 100.0 36 ............................. CTATATCGCGGAATTATGGTTGACTCTGATTTTAAA 49829 29 100.0 37 ............................. TGAGAATTCAACTTCATTCCTTCCTTTTGACGGTCTT 49895 29 100.0 39 ............................. AAACATATGGATATCGACCGACTCACACGTATTTCTCTT 49963 29 96.6 38 .......A..................... CCGTTTGCAGAGCACTTGGTTAGAGCGAACCTTCCAGA 50030 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================= ================== 15 29 99.8 37 GTTTTATCTGAACGTAGTGGGATATAAAG # Left flank : ATCAAAAAATCGTAAGCATCCACTTCTGAGCACTTCCTTTGGGAAGTGCTTTTGTTCGTTCTATGCGGAAGTACTTTCCAAAATGACGTTTAATAGCTCTATTATAGTACGATGTTGTAAGTCAACAAGCAGATTAACGAAAGAAGGGGATAGATGCGCCCTGCGCTCCGGCAGAAGAAAGGCTAACGTGTCTTTTTCCGACCGCTCTCGTCCACCGCCCTTCCTTCTTTTCTTGCCTCTTACCACAAAAATGTGTCAATTTATCCAATCAGATGTATATAAGTAGCTTTATTCATATAGGGAGGTTTCGATGAAATTTGCAGTAAACCTAATTTTAGGTATACTGGACATGAGCCCTTATATAACAAGGACTTCAGGCATTTTTTCTTCCGTGTTAAAAATAGAACTCCTGGTTTACTGCAAAAAGCTGATTTTTGATTTTTTTTTCAATCGGTGAAACCCTTGATACATGAAGGCTTTTGTCCATTTTGTGTTTAGGG # Right flank : TGTTAATCTGGTCATTGACCAACGCTTTAATATCATGTTTTA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACGTAGTGGGATATAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 1 11576-12271 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE952850.1 Aneurinibacillus aneurinilyticus ATCC 12856 Scaffold527, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 11576 29 100.0 38 ............................. GCGTTCCTAAAACCTCTTTTCTACCCCACCGCCTTCAA 11643 29 100.0 35 ............................. TTTTGAGTATAATCTTTAAATCTTGTAATTTCCTC 11707 29 100.0 38 ............................. GCTCTTCCAATTGCGGCGATTGTGTTCGCTTCTATCGC 11774 29 100.0 37 ............................. ATAAACGCCCTACGCCAATCAAAGCATTAAAAACACA 11840 29 100.0 36 ............................. TAATCGGTGTGATTGTATTCGCCACCCGCAAAAAGC 11905 29 100.0 38 ............................. CAGACATACGAGCGTATGGGCATTGACGCAACGACCCA 11972 29 100.0 39 ............................. GTGAGGATGAACACACATATAGATTTGAATTTGAGTTAT 12040 29 100.0 40 ............................. GCACAACGGAACCGGATCTCTACAACGAACAATCGAGCAA 12109 29 96.6 39 .....................C....... TTATTACGACAAGGAGTCAGCTAAGAAAAACATCATCGA 12177 29 100.0 37 ............................. TGGATTTAGCGACAGCACAACAATTTATTTCAACTAT 12243 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================== ================== 11 29 99.7 38 CTTTATATCCCACTACGTTCATATAAAAC # Left flank : TCATACGACTATCTTAAACCGATGCAATCATACCATTTTTAGGATAATCCCACTACTGTCATCTATAAAGCAACAATTTTTTAGAAAAAAGCGAAAGAAAAAGATCCTTTATATCCCACTACGTTCATATAAAACTTATTTGCCCTAACCCGGTTAGTTTAGCTTGTTCTACTTTATATCCCACTACGTTCATATAAAACTATGATAGAACGTATGGAACAAATTCAGAATCATGAACCTTTATATCCCACTACGTTCATATAAAACTAAGTTTGCTATCACAATAAGGACAGGTATATCTACCTTTATATCCCACTACGTTCATATAAAACCTCCTTATGCATTTACAGAAGGAGATCGAGCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTATGCATTTACAGAAGGAGATCGAGCAAACTT # Right flank : CCCTAAAAACAAAACGGACGAAAACCTTCATCTATCAAGGATTTCATCGTTCAAAGAACTCAGCAAAAGTCGGCTTTTTGCAGTAAACCAGGAATTCTATTTTTCACATAGGAGAAAAAACGCCTCAAATCCTTGCTATATAAGGCCTCATGTCCAGTATACCCAAAAGTAGGTTTACTGCAAATCATGAACGTATTCCGCCACGAACACCGAATATGAAGAATGATATCTAAGTAACTTTTATTGCCTGCGAAGCTGTTCAATTTCTTCCTGTGTAAGCTCGGTTAATTCGGCTACGGTCTCGTTATCTAGTCCTTTTTGTATCATGCTCAAGGCAACTTTCATAATAGCTTTTTTCTCTCCTATTTTCTTTCCTATTTCTTCTCCTATTCTCTTTCCTCTTTCCTCCCCTATTA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTATATCCCACTACGTTCATATAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 266-41 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE952854.1 Aneurinibacillus aneurinilyticus ATCC 12856 Scaffold548, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ================================== ================== 265 31 100.0 34 ............................... CAAATGCGTTTATTCTCCTTGTATTCAAAAAGGC 200 31 100.0 33 ............................... GTTCCGTACCACTTATACACATACAAAAACAAA 136 31 100.0 34 ............................... GATTAAATGACAAGTAAACTCTGTTCCATCTTCA 71 31 87.1 0 .......T......C..C............G | ========== ====== ====== ====== =============================== ================================== ================== 4 31 96.8 34 GTTTTATCTGAACGTAGTGGGATATAAAGTT # Left flank : TGTATGTAATCATTACTTACGATGTCGGTGAGAAAAGAGTAGGGAAAGTATGCAGGAAATTAAAGGAATATTTAACTTGGACGCAAAACTCTGTATTTGAAGGAGAAATCTCCAAAACACAGCTCCTAAAGTGCCTAGCAGAACTGGAGCGTATTATCATATCAAACGAAGATTCCGTTTACTTCTACGAAGTGAACAATCCGCGCCACATTAAGAAAAAGGTAATGGGGGTGGAAAAAAGCTTTGAGGAGTTATTTCTTTAAGGTAAATTTCATGATATGTTTAAAAGTGTTTAAGAAGGTATTCTTGTATACGATAATAATTATAGTGCAGCGGATCGTTATGTGGAAAAAATCGCAAGAAACCTTGTGTAGCAAGGGATTGGTACCATTTCTGAAAACGATTATGAAACAAGACTGGAGGTTCACTGCAAAATAAGGGTAACGTCGTACTTAGTTTTTGTTGATGTACTGCGGGATTGAAGCGTTTTTTAATAGAGG # Right flank : GTTAATTTGGTCATTGACCAACGCTTTAATATCATGTTTTA # Questionable array : NO Score: 5.70 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACGTAGTGGGATATAAAGTT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.74%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 1 1023-723 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE952864.1 Aneurinibacillus aneurinilyticus ATCC 12856 Scaffold584, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1022 30 96.7 36 G............................. CCAGCAATACCGTACTCACTGGCGTAAGAGCCGTCG 956 30 100.0 36 .............................. CGAAGATTAATCAAAGTTTCAGCAACATTATTATTC 890 30 100.0 38 .............................. GATTGAAATGTAGTCTTACAAGCACCCCATTATGTGTA 822 30 100.0 38 .............................. TGGCACTGTCTTGATACATGAAGATGTGTCCTACCCCA 754 30 96.7 0 T............................. | GG [726] ========== ====== ====== ====== ============================== ====================================== ================== 5 30 98.7 37 AGTTTTATCTGAACGTAGTGGGATATAAAC # Left flank : CATCGTTAAGCATGTTAAAAAAAGAAGATATCAAACTTGTTGACCCTTACTTTTTGGTAAAATCAAAATTTGAACCTGTAAGAACAAAATTCAATAAATCATATTAGTTAGTATAGAAGTACCGCTCCTTTTTCAAAGGGTGCGTTTTTTATTTTAAGAAAAGTGTCTTGCCTTTTTGCGTACGTTCCTATTCTCTATTACAGTAAAAGAAGAGGATATCTAACATCGATGATAGACATATAAGGGGTAAACAACAAGGCCGCGACACTCCACAAGACAAATATCAAGATTACTATGTAGTAAGGGGCGTTCGATGAAATTTGCAGTAAACCTAATTTTGGGTATACTAGACATGAGCCCTTATATAACAAGGAGTTGAGGCATTTTTTCTTCTGTATTAAAAATAGAACTCCTGGTTTACTGCAAAAAGCTGATTTTTGATTCTTTTTTAATTGATGAAACCCTTGATAGATGAAGGTTTTCGTCTGTTTTGTTTTTAG # Right flank : CTTGGCGATATATTGAACGCATGGAATTGAGAAAAGCACGCCATGTACTTAAAAATTCGTTTTTTCATCATTTGTTTATCCGTGTGCCAACCGACAATCTTTCTGGAGTATAGGGCCATGATGCTCGCTAGATACAGCTGGCTTTCTTGGATGTGAATATACATAATGTTGGCCATCCACACTTGGCCCGGTGCTTGGACGCTAAACTTCTAAGCGAGCACGTTGTCATGAAGGGGCGGTTGGTGTCACCGTCTTTCCTTGTTCATCAATAAGTTGACCATTTCGAGTTTACATTCCTTATCGTACTTTTTCTTCATAGTTAGACACTTGAATGTAGAATGCATTTGCTTTATTTTTGCACTCTTGTTTTCGCATGTCCAGAATCCAGTCTAACAACATGGTATACTAAGAGGTAACAAAAGAAAAAAGTACGGGGGACATTATGAGAAAAAGATTGGACCTACGCATTGATTTTGCCTTTAAAGCCTTGTTTGGTACAC # Questionable array : NO Score: 6.00 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTTTTATCTGAACGTAGTGGGATATAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //