Array 1 269750-270314 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNPP010000001.1 Clostridium sp. D43t1_170807_D5 NODE_1_length_796790_cov_27.3326, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 269750 36 100.0 30 .................................... TGCATTTCGGGCGGTGTCCCAGCGTCCATA 269816 36 100.0 30 .................................... GCATACAATGCCATGAAAGCCGGAGAGAAA 269882 36 100.0 31 .................................... TAGTAAAGACTGCTTTAATCAGACGGTCAAA 269949 36 100.0 30 .................................... AGACGATGCTGACAGTATCACAGAAATTAA 270015 36 100.0 30 .................................... TGAAACGAGCCAACACTTTTCAACTCTTCT 270081 36 100.0 30 .................................... TATTGTCACGCTTACTCATCTTATGAACGC 270147 36 100.0 30 .................................... CAGCGTTACAACGTTATGAGCGGGGCGAAT 270213 36 100.0 30 .................................... TAAGGGTTTCAATTTGTTTTTTTGTTGAGA 270279 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 9 36 100.0 30 GTTTGAGAGCTTTGTTAATTCATAAAGGTACAAAAC # Left flank : AAAATACTTACAAAGCTTTATCATGAACTTTCTCTACAAAGCGATTCTTTATTGCAGGAAGATGGAATAGAATTAAGAGAATCCATAATCAGTTATTTTGACAAACTTTTAAACACAGTTCCTTATGCTATTACATACAATTTTGAATTTGAACTATCATCTATCATAAAAGCATTAGATGTACAGACAGATTCAACTGCTGACACACTTACAGAAAAATTATGTTCATATATGAATTTATTACAACAATTGTGTGGGATTTCAATATTTGTAATTTCAAATTTAAAATGTTTATTGCAAAATACTGATTTGCAACTTTTATACGAATATGCTAAATACAATAAAATAAATCTTATCATCATTGAACCAATTCATACACCACATATTATAGATGAAAAATGCTGGATAATTGATAAAGATTTGTGTATAATTGAAGCATAATTAACACCATATTCGCAAATATGGAAGCTCGGAGAGAACCTCAAATATTATAATTTGAG # Right flank : CACATCTTATAACTATGACGCTTGTATCACAGAAAAGCGGATTAAACCGAGGTATAAAAGGGAATTCTAAGACATATAGAAATATGGAAAAACAATGGTCTACTGCATTAAAGAATGGTCAAAAAGTAACGGATATTGATATAAACCTTTCATATAAATAAAAATGGTTCGTCACGTTCGTCAGCATTTGATGTTTCGTACAAAATCGATGGAAAATTATTCAATCGACATTTTAAAAACTAATAATAAAAACAAATAATTAAAATCTAACAATAAGGAGATCTGTTATGTTAAAAGGTTTTGAAGATGCATTTGTTGATGCACAAGCTAATGTTATTTCGCTTTGCCTTGAATTACTTAAGAATTCTGAAAAGAGTGCAGACGTTATATATGTATACATATTACAAAATGATGACGAAGAGTATATTGACGCATTTTTTGAGAAAGATGGCAAGTTGTTCACAACCAATGATTGGTGTTCAGATGCTCAAATTAAGGAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAGCTTTGTTAATTCATAAAGGTACAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 2 271861-272160 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNPP010000001.1 Clostridium sp. D43t1_170807_D5 NODE_1_length_796790_cov_27.3326, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 271861 36 100.0 30 .................................... TGTAAGGGAGAATAAATGAATAGCGATAGT 271927 36 100.0 30 .................................... TAACGATTTAACTGACACTTTGAACGTTGA 271993 36 100.0 30 .................................... ACCACCCAAACACTTTACCCCAAACACCGA 272059 36 100.0 30 .................................... AGCTGGCCGTATGGGTGTATGGGAGTGTAA 272125 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 5 36 100.0 30 GTTTGAGAGCTTTGTTAATTCATAAAGGTACAAAAC # Left flank : ATGAGCTTGGGCTGAACGAAGATGCTGCAGGACAGATGTATCATATCCTCGGAATTGTAAATCAGGAGTTCGGAAAACTTGATGATGCCCTCATCAATTTGAAAAAGTCGGAGCTTATCATTCCGGCAGACATGGATATACTGAAACGCAAGGCGGTTATCTATGGGCTTCTTGATGAGATTACAAATGGCTTGCAGACTGCTAATCAGATGAAGCTGCTTGCACCATCTGACTATTCCGGCTATCAAGCTGCTTACATTTTGCTCAAACGCCCTCTTGTAATAAGCAAGAGGGCGTGAGTATATAAATGGAGGAATAAAAATGAAGTACACACCAAATCCTATGCAAACAAATGATATCACGCTTTCAGATGACCTTGTAGCCCTTACTGAATTGATAGCAGCCAATGTCCACGATGTGTGGGCAGCTGGGCGCATTAAAGAAGGATGGACTTATGGAGAAGTTAAGGATACTGAAAAGAAAACCACTCCTTGGAAGAG # Right flank : CATATTGAAAATGATTAAAAGGAGTAACCTATGCACACCTTTACCATCGGTGCCATCGTGCGCCACTTCAAAAGAGAATATATCACCAATCCGCAATCAGCCGAATATCTCTACAAGATATTGGCATTTGCATCCCACACGGAGACAGGAGAGAAGCTTGTGATCTATCAGGCACTTTATCCTCCATACAAAACGTGTGCACGTCCATATGACATGTTCATAAGCGAAGTGGATCATGTGAAATACCCTGATATCAAGCAGAAATATCGTTTTGAAGTAATTGAAACTGACCTTTTTCCACAAGCATGATAGGGTATATAATGACGCAATCTCTCACAAAGGAGCCCCACCCATGAAACTTTTCCACAAAAAATCACACACCACCTACAACCCAGCCGAAAAAACACCTGTCATCAAATGCAGCATCTGCACAGGAGAGCAGGTAGCTGGATTTCAGGACAATGCCACTAAGGCATTTGAGGACATTATGCTGATACAAG # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAGCTTTGTTAATTCATAAAGGTACAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //