Array 1 570573-570902 **** Predicted by CRISPRDetect 2.4 *** >NZ_LRJW01000001.1 Enterobacter hormaechei subsp. oharae strain SMART_1260 GCID_ENTES_00084_NODE_1.ctg_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 570573 28 100.0 33 ............................ CTCACAAACTATTGAGATGATTAACTGATGGAA 570634 28 100.0 33 ............................ TCTTTTATTTTCGAGCATAGTCACGGCACAAAC 570695 28 100.0 32 ............................ GGAACCGCAAACAGAGAAGCGCCACCGCCGAC 570755 28 100.0 32 ............................ AGTGGTCGATGATTCGTGCACGCCACTGCTCT 570815 28 100.0 32 ............................ CTGAGCTTTGAAGGCGAAGTGCGCAAGAAGGA 570875 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 6 28 100.0 33 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : CAGGAACCCGCACAGACGGCGAGTTCACCCGTAAGCTGCGCTTCGGCACCGGCGGCAAAGGCGGCGACCTCTTCATGGCGGGTGGGCATCCACTCAATGGTCTTCATCTTGTTAAGGCTATCGCTGAGTCCGTTCAGAGAGTCGCCAGTGACGCCCCAGATACGCTTTACGCCAGCCTGCTCAAGGGTTTTCGCTATGTATGCAGCCACGGTTTGTTTCATGGTTGTCCGTCTCCTTTTTGTGATATCGCTTACAAGCTTAGAAGAAAGTCGCTGTATTGCCTGCTCAGTACTCTTTAAGTACAGGTGGTTTTTCTGCGCGACGCGCCGCCAGCGGGCTGAGGTTGGGGCGGGCGGAAGCGGGTTTGCAGACCCTTTTTTCCTGATGATGCATAAGTTGTTGATTTTATATGGTTGGGCTGAAGGGGAATAAAAAAGGGTCTGGAGGAAGTTTTTGAGGTATTGGTTTATCAGACAAAGGGATAGGTGTAGATTGTTTCA # Right flank : ATCTTGCCTGATTTGCTCATGCCTTTAGTCACGGTTCACTGCCGTACAGGCCGTAGGCACAATGTAGGCCGGGTAAACGTAGTGCCACCCGGCAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGGGGTTCCAAAGGCAAATGCGCTGGCCTGCACGGGCAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGGGTTCCAAAGGCAAATGCGCTGGCCTGCACGGGCAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGGAGTTCCAAAGGCAAATGCGCTGGCCTGCACAGACAAAAAAGCCCGGTGGCGTTGATGCTTACCGGGCCTACAGGTGAACCGCGAAAGATTATGCGAGCACAAGATCGCCTTGCGGATGGCACGAACATGCCAGCACATAGCCCTCTGCAATTTCTGCGTCGGTTAGCGTCATGGTGCTGGTGACCGTGTACTCACCGGAAACCACTTTGGTCTTACAGCAACC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [61.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 586204-587011 **** Predicted by CRISPRDetect 2.4 *** >NZ_LRJW01000001.1 Enterobacter hormaechei subsp. oharae strain SMART_1260 GCID_ENTES_00084_NODE_1.ctg_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 586204 28 100.0 32 ............................ TTCTGGCGTGTCCGGCGTAGGCCGTCCGGTCA 586264 28 100.0 32 ............................ ATAAAATGGTTATTGTAAACGCAAAAGTGTCA 586324 28 100.0 32 ............................ CGGCTGCAATTAAGGCTAACAGTTATCTTCAG 586384 28 100.0 32 ............................ AGGCTCATCAACTTTATTCGTTGCCTGGGTCA 586444 28 100.0 32 ............................ GGCTCGTCGCTGACTTCTTTGTCCCATACAGG 586504 28 100.0 33 ............................ GCTTGGCCTGACACATACTGTATTTAATCCTCG 586564 28 100.0 32 ............................ CTGTGGTGTGCCTGGACGCTAATGGTCGCCTG 586624 28 100.0 31 ............................ AAGCACGATCTCAATAATGTTCTCTCAGTGA 586684 28 100.0 33 ............................ TGGGCGTAAGCAACTGCTGAAATGAAATCGTTG 586744 28 100.0 32 ............................ GTTGCGCACTGAGAGACTGGCTCCGTCCATGC 586804 28 100.0 33 ............................ GCGAACGCCTGCCTGATTGACAGGCCACCCTCG 586864 28 100.0 32 ............................ AATGGCCTTATAGCGAGGACCATCAGCAGCCA 586924 28 100.0 32 ............................ TGGAAATTGACAGCCGGGAAATTGAGATCACA 586984 28 78.6 0 ...................T.A..CTCC | ========== ====== ====== ====== ============================ ================================= ================== 14 28 98.5 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : TCCCGCAAACGCAGCCCGTTTGCCGTTGCCTCGGTGCTTATCTGGAAGAAGTCAAAACCGAACTCGCAGAATCAATGAGCGATTTCCGGGTGGTTGAATTTGACGACGAGGCGGAACGGCCAAAGGAAAAAGAGTGGCTTCTGGAAAGTACTGAAACCAAATGCGATTACTGCCGGGCATTAAACCACGTGCTGCTGGTGTCGCATTTTGACCGCGAGATGCTGCCCCATCTGACAGGATTGCTGCATGACATTACACATTCGATGGCGACAGATGTGGCTGCACCTGAATATGGAAAGCCTGTAATCCATATCATTAATTAAGTTTAGTGTCGCGCGTCGGGGAAGGGACTCCGGCGCGGTATGTCGCAACCATTTTTTCGAGTGGTTCTTTAAGTTATTGATTTTTATTATGAGAATAAAGGCCGCAGAAAAAATGGTTTTAGGTAGATATGTTGATTATTTTCTTTTCGAACAATAAGATGGCGAAGATTTCTTCCA # Right flank : CCTAAATATTCACTCCAGCTATTTTAAAACCCACAATCATCACCACAATCCTCGTTGTATTTTAAATAAACTCAATACTCATTCACCCCACAACCATATTCCCTCATATATATTATTCACAAAAATAATACATTAAATATGTCAGAGGTTTTTTATCTCGACATTCCGATAATTATTATTCATTTGATACGCGTCACATTTGTCTTCATCTTATCTCCGCTAACATACCCTGCATTCAACATATTGAAATAAAAAGCACTTGCTATGCCAGCGAACAGCATTACCTCGTCCGACTTAAAAACCATTCTTCATTCAAAACGTGCCAATATCTATTACCTGGAGAAATGTCGTATTCAGGTAAATGGTGGACGCGTTGAATATGTCACTCAGGAAGGTAAAGAGTCGTTTTACTGGAATATTCCCATCGCTAATACGACGGCAGTAATGTTGGGAATGGGAACATCCGTTACGCAAATGGCCATGCGGGAGTTCGCGCGAGC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 596857-598390 **** Predicted by CRISPRDetect 2.4 *** >NZ_LRJW01000001.1 Enterobacter hormaechei subsp. oharae strain SMART_1260 GCID_ENTES_00084_NODE_1.ctg_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 596857 28 100.0 32 ............................ TTTACGTACTGCAATAAATTCGTCTTTTGTAA 596917 28 100.0 32 ............................ GATGACGGCACGACGGTCGCGATGTTTTTATA 596977 28 100.0 32 ............................ CATCTGAGTCAGTCGTGCGAGCTGACGTTCGC 597037 28 100.0 32 ............................ CGTATGGTGAACTCCGGTACCGAAGCGACCAT 597097 28 100.0 32 ............................ CCGTAACGGCGTGGCGCAGCCGCTGCGTCTGT 597157 28 100.0 32 ............................ ATGACAAAATTGAAGCTGTTTTGGAAAGGCTG 597217 28 100.0 32 ............................ ACGATTCCCGGTAGCCCTAAGCCCTGGAAATC 597277 28 100.0 32 ............................ GTGTACTTCGACGGATATACCCACTACAGCAC 597337 28 100.0 32 ............................ AGAAACGCTATTAAAGGGAAAAATATTCATAC 597397 28 100.0 32 ............................ GGCACGCTGTCGGCGGGCAGTTAGTTGAAGTC 597457 28 100.0 32 ............................ ATTTCAAACTTTTCCCGGCCAACATGTATAAC 597517 28 100.0 33 ............................ TGACGGGCAGAAGTACACCGATACGCCGATCCC 597578 28 100.0 33 ............................ ATACAGGGCTGCCGCTATAGTGCAAACCAATAT 597639 28 100.0 32 ............................ AATCAACGTGAACTTTCATGGCGCAGAACTGT 597699 28 100.0 33 ............................ TGGCAACTCGATAACGGTGGTTTTACCACGCGC 597760 28 100.0 33 ............................ GACGTGAAAAACATCCACGAAGCCCGGTCTTTT 597821 28 100.0 32 ............................ TTCATTGTGATCATGCCAATCGGTGTATGGTT 597881 28 96.4 32 .........G.................. TGCCTGACTTCCTTCGACTGGGTGAAACGTTC 597941 28 100.0 32 ............................ AGCATCATTCCGCGGCGTGCCGTTCAAAGTCT 598001 28 100.0 32 ............................ CGCGTGCTGGTGCAGAACGACAGCGATATCCA 598061 28 100.0 33 ............................ AGCCGCCTGTTTACCAGTGATGAAGATGCGTTC 598122 28 100.0 32 ............................ TCGTTGCGGGTTGATCAGCATGTCGTCGATTG 598182 28 100.0 32 ............................ TGTGAACTGAATGAGAACGCCGACGGCGTTAG 598242 28 92.9 32 C.....................C..... TTGTTGCTGATCACCCTCCCGTTGTCACCCGG 598302 28 89.3 32 ..A......T..........T....... CGTTGAGTTTCTCGAGCCACGGTTTTGACATT 598362 28 85.7 0 ..T.................T...T..C | T [598382] ========== ====== ====== ====== ============================ ================================= ================== 26 28 98.6 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGCGCCACACGTTCGCTCTCGTCGGGCGTCAGCGTCCGGCCCGTACTTTTGCGGCGGGCAACGTTACGCTCGTTAATTCCCGTGACGCGTAAAATCTCCGCTTTCGACATGTCCGTCCACTCGTGAATATTGTCGAGGACGCTGACGGGTAATCCTTGATTGAGATATTCAATCAACCGCATGCCTCTGCTTGCAGGTAAACCGGCGTAGCGCCACAGCGTGTTATCAGCCGACCTTTGCGCAGGAACCCATGTTCTCATGATACCTCCTGAGTGATGTCATTTGTCATGAGTAAGTATAGCCATTTGTCAGAGAGTATGGAACGGGTGTTTTTTGTTCAGGGTGGGGTAAAAGAAGGATGATATTTGACCCTAATTTTTGCCCAGAATGTAATGTATTGATTTTTAGATTAAAAATCCTGGGGTGTAAAAAAAGGGTTTGAGCAGTGTTTTTAGCTTTTTTTGTATGAAAATCATGATGGTGGAGAGGTATTATTTCA # Right flank : CATCCAACGCAGCAGCATTTCCCACCGCATCCGTGCACCACCGCACAACCAACACAAAACCCGAAACCAAACCCGAAACCCAACCAATCGTTCAAATAATCGACTGTGCTAACAAAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCCTCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //