Array 1 913529-911372 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHYV01000001.1 Streptococcus intermedius strain 15-03-11 NODE_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 913528 32 100.0 33 ................................ ACTGCTCGATTAGGGTTGTTAGGCTCTGGCAGA 913463 32 100.0 35 ................................ ACCAAAATATTATTCTCTCTTACAAGTAATTGCAG 913396 32 100.0 35 ................................ CAGTTAATTTTTTTCATTATTTGTCTCCTTTTTCC 913329 32 100.0 35 ................................ CAGTTAATTTTTTTCATTATTTGTCTCCTTTTTCC 913262 32 100.0 37 ................................ AATCTTTAGGTGGAGATACCAATAAAGCAGCAGAAAT 913193 32 100.0 38 ................................ TAAAATACACAGAGATTCCACTAAGTATCAAACTGTTC 913123 32 100.0 36 ................................ ATCAGTTGGTTCATGAATATATAGAAACCAGAAAAA 913055 32 100.0 35 ................................ ACTTGTTTCCCTAGCTACTCCTGAAGTAGCAAGCT 912988 32 100.0 35 ................................ ATCAGCTTGTCTACCAATGCTTGAGAGAGGAAATA 912921 32 100.0 35 ................................ ATAGCTTCTCTAAACATAGTGCCCAAGTTGTAAGT 912854 32 100.0 33 ................................ AGATGAAGCTTATTTCTATACTTTAGTCAATTA 912789 32 100.0 34 ................................ AAAAAGATGAAACGCGGCTGATTTTTGAAGCAAA 912723 32 100.0 33 ................................ ACCACTCGTCACATACCCATCTGAAAGATATTG 912658 32 100.0 34 ................................ AAAAACAGATATGATTCATGCTACTGGAGTCGTT 912592 32 100.0 34 ................................ CAAAGTGATTACATGTTAAGTCAACTGGAAGTGT 912526 32 100.0 34 ................................ AGAGCATTGTGATTTATTTAACTCCATAGGATAG 912460 32 100.0 34 ................................ TGCTGCCTTGACTTCCATATCTTCCAGGTCCAAC 912394 32 100.0 35 ................................ TGTATTGGCGATCAAGTGATTAACTAGGAGGGACT 912327 32 100.0 35 ................................ AAGGTATTTGATGATTTCTTGCACCGGATTCCAAA 912260 32 100.0 34 ................................ TAGTCGAAATATCCAACTTATCTTAGCTCAAAAT 912194 32 100.0 33 ................................ TCCTTATATTTTAAACTAATAATTAACATTTCC 912129 32 100.0 35 ................................ ACAAGTTGGATAGGCTAAGCAGGTCTCAAAAAGAC 912062 32 100.0 33 ................................ TATAGCTGTATTATACCATATCCTACAAATAAT 911997 32 100.0 33 ................................ AATAGTTCCCCTGCTGTCTCTAATGCTCGTTGA 911932 32 100.0 33 ................................ AATGAATTTCATGTAGCTAGGAGCAATGAAATC 911867 32 100.0 34 ................................ AAAGTATCAACTCAACAATGATGAAATAAGGGCG 911801 32 100.0 35 ................................ AGGTTTGGTATAATCCAATGTGACAAAATGTAAAC 911734 32 100.0 34 ................................ TTTAAAATATGAGATGGCTTATAATACAACAAAC 911668 32 100.0 35 ................................ ATAAAAATGAAGCACGGTATGGTAGCCGTCTCCAC 911601 32 100.0 34 ................................ TTTACGATAATCATCATATCCATCTCCAACTAAA 911535 32 100.0 34 ................................ ATAGCTGAAAACTTTACCATTAAGATAATTGGGT 911469 32 100.0 34 ................................ CTGAAGAGTATCGAAGTAGAATCAAACATCCACC 911403 32 90.6 0 A...............A.A............. | ========== ====== ====== ====== ================================ ====================================== ================== 33 32 99.7 34 GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT # Left flank : CTAAAGCCATTCGTGGTGAACTGGAATCCTATCCGCCGTTTTTAATCTAGGAGTAAATTTATGATGGTTTTAATAACTTATGATGTTAATACGGAGACTGCTGCAGGTAGGAAACGTCTTCGATATGTTGCAAAACTCTGTGTTGATTACGGTCAGCGCGTACAAAATTCAGTTTTTGAATGTTCGGTAACTCCAGCGGAGTTTGTAGAAATAAAAAATAAATTGTTGACAATCATTGACCAAGAATCTGATAGCGTCCGATTTTACTTACTTGGCAAAAATTGGCAAAATCGCGTGGAAACCCTTGGTCAAGATGATAGTTATGACCCTGATGTGGGGGTATTACTTTTATAAAAACTTGTGTGCGAATCTAGGTTGCACATCAAAACCTAGAGCATTCGCGTTTTAAAACAGAAGATAATGACAAAAATCTAGTTTTTATTAAATGAAATAGCTCAATAAATTCTTATATTTAGTCACAAACGGTGCAACCATGCGCT # Right flank : TTTGATGAGTTTGTCTTTAAAAGTTTGAACGAGAAACTGTACCAAAAGTTAGGTTTGGATAAATAGCGAAGCAAACTAACATCTGAGGTCAGAGAGGTTCTAAACATACATATCTTAGGTAGAGTACTTGAAGTAATAAAATTCCCGATATTTCCAACAAAAAAACAGCTCAATAATAGAGTTGTTTTTTTTAAATTGTTAGCAAATCTAAATTTGGGGTTTGTGTTGTGTATATATCTCGATTTTTAAACTTCAAAATTATAGAGAGTGGTTGATAAGTAGCGCTCACCATTATCTGGGGCAAGAGCTAGAATTTTTTTACCTGTTCCTAATTTTTGGGCCACTTCAAGTGCAGCATAAATAGCTGCAGCAGAAGAAATACCTACCAGAAAACCTTCTTGTCCACCGATACGACGCCCAAGTTCAAGTGCTTGATCAGAAGTAACGCGGACAATGCCATCGTAAGCTTGAGTGTCTAGTGTTTCTGGGATAAAACCAGC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.60,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //