Array 1 169481-172718 **** Predicted by CRISPRDetect 2.4 *** >NZ_QGGM01000001.1 Psychrobacter immobilis strain DSM 7229 Ga0215685_101, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 169481 32 100.0 33 ................................ TGAGTGAGGTTAAAAAACTCACCGACGCGGCCC 169546 32 100.0 34 ................................ ATGACCGCGGCTCTTACCCCATCTTGATTTTGGT 169612 32 100.0 34 ................................ AATCTATCCATCGTGCTAACAATGCCCTGCGCTT 169678 32 100.0 33 ................................ GCTTTACGTAATTCGCTTAGCGTATCACTAATG 169743 32 100.0 33 ................................ AAAAAACAAGCATATTGGTTCTTTTGACACACC 169808 32 100.0 34 ................................ ACAAAGTATCGGTACACCAAAAAACAACTTGCAA 169874 32 100.0 33 ................................ ATGCCACCACCTCGGCAAATGAGTTAATCAAGT 169939 32 100.0 33 ................................ GCAGAACTCACCTGCCTGTGTGTAATTCAAAAC 170004 32 100.0 33 ................................ ATATCGCGGATATAGCCGTAAGGTATGCCAGTG 170069 32 100.0 34 ................................ CTTAAAGATGATCTTTAGGCACGTAGAAATAATT 170135 32 100.0 32 ................................ CATCTGCGTTAATAAACGATGAATCTTGCTTG 170199 32 100.0 35 ................................ TTTATCGCCATAATCCATAACTGTTACATCAGGCT 170266 32 100.0 32 ................................ TCAACTTATCTAAAACCTGCTGACCTAGCTCG 170330 32 100.0 35 ................................ CTTGGCGCTCATTGGACGTAAGAACAACTCTCTGG 170397 32 100.0 33 ................................ TCAACGATAGCCCATTGCTCGACCACGCTATCG 170462 32 100.0 32 ................................ TATGAGCCTAGCGCAGCAGTTAAGCGTCTTAT 170526 32 100.0 33 ................................ AGGCTTAAACACTAAGAAAACCCACGCCTTGCC 170591 32 100.0 33 ................................ TTAATAATAGGCTCGACACGCGCTGGCATGACA 170656 32 100.0 33 ................................ CTGTTGTTGGCTAGGTGGCTGGTAATCAGGATT 170721 32 100.0 33 ................................ ATACCAGTAACCGTCGTAACTTTATAGCACAGG 170786 32 100.0 32 ................................ GAGCATTACAACACGTTTGGCAGTGTTGAGAA 170850 32 100.0 34 ................................ TTGGTCTTTGCCGTCATAATCAAACGGTGCTATC 170916 32 100.0 34 ................................ AGGAACGGCATTTAAGGATAGACATACAGTAGCT 170982 32 100.0 33 ................................ TAATATACGAACATTAAGAGAACGGGAATACGA 171047 32 100.0 32 ................................ TATCTTTAGCTTGTCAATATCATTCATGGTTA 171111 32 100.0 32 ................................ ATAAGCAAAGCCTAGACTTGCGGTAGCGGTTG 171175 32 100.0 35 ................................ TTTATTGGTAGGGTTGTACCAGCGTTCCTCTTGTA 171242 32 100.0 33 ................................ GCTAGTATTGGTCCTGCGAGATCAGTACCGCTC 171307 32 100.0 34 ................................ AGCTAGCGAATGGTTACGCGATGCAGCTAAGGAG 171373 32 100.0 33 ................................ ACTATAAGCAGTGATTCACTGATTGAGCAAGCA 171438 32 100.0 36 ................................ GCGCTTGCTGCTGTGCCCTGTTGTACCGGTGTATAC 171506 32 100.0 33 ................................ TTAAACACCAACTCCTCTTTAGTTTCAATGATT 171571 32 100.0 34 ................................ GCCTTGTGCATTTGCTCAAACGTCACCTTGTCGT 171637 32 100.0 34 ................................ ATGGCCATGTCTCCAAATAATCAGTTATTGTTTT 171703 32 100.0 33 ................................ AGATACCACAAACACTAGGCGAGGCTCTGCAAC 171768 32 100.0 34 ................................ ATCGTAGATGCTTGCTGTGATACCAACGTAACTG 171834 32 100.0 33 ................................ AAGAGATTTACGAGCAAGTGGTGAGTGAGCATA 171899 32 100.0 35 ................................ AACGCCGTCATTATCAACCGTGATGAAGATATTGC 171966 32 100.0 34 ................................ TCGCTAGATTATCCGCCATCTGTGAATAGCTACT 172032 32 100.0 33 ................................ ACAACTATCAAGATATGTCGGTCAGCATGATTC 172097 32 100.0 33 ................................ TTACTGGAGGTCTAAGAGAACTTACAGCAGGTT 172162 32 100.0 33 ................................ CCCCATAGTGAGCAATTAAACCAGTGGCTTTGC 172227 32 100.0 35 ................................ ATGAGTTGAGATTGGGCGGTGCTGAGGCTGTTAGA 172294 32 100.0 33 ................................ AAACGCTGCCACGGGTCGCTCAATACCGTTAAT 172359 32 100.0 32 ................................ AATCTATCCATCTTATCAATAACAGCCTGTGC 172423 32 100.0 34 ................................ GCTAATACAGTAAACACCCTCCGGCACGTAAATA 172489 32 100.0 34 ................................ ATGAGCCGCAGCACTTTGGGCAAACGCTAATGGT 172555 32 100.0 32 ................................ TCTATTTTGCGGTTGTGGTGCAAATAAGGTAC 172619 32 100.0 37 ................................ AAATTTGCATCGCAAGCCAAAGCTCGTCAACAAGACG 172688 31 84.4 0 .....-A..T......TT.............. | ========== ====== ====== ====== ================================ ===================================== ================== 50 32 99.7 33 TTCGCGTCCATCACGGGCGCGTGGATTGAAAC # Left flank : GGACGCAAACTTTGCAAAACGGTTACGTCACGTTGCCAAGCACTGTTTAAACTTTGGGCAACGGGTGCAATATTCGGTGTTTGAGATTGAGGTCAATCCGGCTCAGTGGACGACGCTGAAAGCCACGCTTGAGGACATTATTAATCATGATGTGGATAGTTTACGTTATTATTATCTTGGTAAAAACTGGCGGAATAAAGTGGAACACATTGGAGCAAAACCTGTGCTAGACTTAAACGATGTACTGCTATTTTAGCGGTTGTTATCATAAAATCTATTGTTTGACCGTAATAAGGTCAATGCGAACCTATAGCGTACATGAAATCTCTAAGAGACTCGCAAAGGGGTCGCAATGTTATTTAACAACTTGATTTTACTGAATTTATTTTCGTATATTAAAACTTTGGTAAGCGAGATGCTTGCCAAATTCGCTTATGGTTTAGACGTTCGCAAATGCCAAGGTTTTTTCTTAACCTTATTAGCGACTTAGACTAGGGGCT # Right flank : CCGCATAACTCAAGCATTCTATGGTGGTTCGTTGACCTACCTTGATATGGTAAAGATTACCACTCAGTCCAGTATAGATTTTAGTGAATATAGGTAATATTCTTCATATTTTCTCAATTATATGCAAGGATTAAAACGCTAATCTCCTTATATTGTGCAGAGTGGTCTTACTAACCCCTGTCGCACTTACGATAGATAATGAGCTTACAGAGACGGTGCTCATCAAAGGGATTCACTATATACGTCCGTTCGATGATCATAGTATTTTATACGTTTGAGAGGAAAACGAGAAAGATATGCGTACTAGTGAGACTGGCGAGCTAACATGGGATAATATTGATTTTAATAGGTACAAATACGATACTGGATATATTTCTAAGGTTTTGCCCTTCTCTCCCGAAATGGATATTGAATTTCCTATATAATGTGAACCATCTCTTTGTTGATAACCCCTTTAATTTAGGCTTTTTTCTTAGTAAAAAAATGCTGCTTATCAGGTA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCGCGTCCATCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGTCCTCACGGGCGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.80,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //