Array 1 30735-29687 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAERMU010000024.1 Cedecea davisae strain LAM2020 LMT5_ctg024, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
     30734	    28	 100.0	    32	............................	AATCAGGGAATATCCGCCGCGTGACGTGCGGG 	
     30674	    28	 100.0	    32	............................	AAAAGAAGCCACTGGTTAATAGCCGGTGGCTT 	
     30614	    28	  96.4	    32	.....T......................	TTAACCTTGTCAGGCCACTTCACCTTTTGCAG 	
     30554	    28	 100.0	    32	............................	TGACGACCCTAATCAGCAACAGTAGCCCACAT 	
     30494	    28	 100.0	    32	............................	TGAGCGCATGAGCGGCACGCAGGCTGCTTCCA 	
     30434	    28	 100.0	    32	............................	GCTGCCGGCACCGTAGAGGGGAATGATTAAGA 	
     30374	    28	 100.0	    32	............................	AGATGGAACGCAAGTACGCACATCGCAAGCTA 	
     30314	    28	 100.0	    32	............................	CGGACGCCCGGTGCGGTCTGAATTAATGAGAA 	
     30254	    28	 100.0	    32	............................	AATAAGCAGGTTGGACAATCCAGACACCACAA 	
     30194	    28	 100.0	    32	............................	TCTCGGGGCTTGTGCAGGAGCATCACGCAGGA 	
     30134	    28	 100.0	    32	............................	TCACCGTGAAAACAGGTGTGAAAGTCGCTTCC 	
     30074	    28	 100.0	    33	............................	CCGGTGAGTTTGTTGTGGCTAAAAATGGCGAAG	
     30013	    28	 100.0	    32	............................	CGATAATCTTCTCGCTCCGCCAAGAATGGAAA 	
     29953	    28	 100.0	    32	............................	GAACGCTCGCTTTTGGGAGTTCCTGACACACA 	
     29893	    28	 100.0	    32	............................	ATTAAACTGTGGCCATTCTTTCGACGCCCACT 	
     29833	    28	 100.0	    32	............................	ATTTCCATGCCTGGGACCATGTATCAACTAAT 	
     29773	    28	 100.0	    32	............................	AGGTTGTTAGCCTGTGGCGGCAGCTGTTCAAA 	
     29713	    27	  85.7	     0	...........C.........CA.-...	|                                	
==========	======	======	======	============================	=================================	==================
        18	    28	  99.0	    32	GTTCACTGCCGTACAGGCAGCTTAGAAA	                                 	       

# Left flank :   TAATGCTACACCGGAAACGCCAATTTCACGGGTGGTAGCTCAGGCAGAGTTGGCGTACCGTCTCAAACAATCCGGCGAACCCTTATGGGTTCCTCTGCCCGAGCCACCATTATTCATCTCAGGCAAGGGAGTCTATCCTATCAAGCCATGAGTGGTCAGGCAAAGCAGTGATCTTCTGGAAACGAGATATGGACCAGAGTCACGGTTTGAGTTACAGGACGCCAATCCTGACACCTGATTTTGCAGGTGCATGAGCATCATAAAACCTTTTATTACTCACCGACAATTCACGCTTTGAAGATCAGGAAAGCGGCTCGCAGAATATTTTTCAATGTTGCAAAAATTGCATAATCGCAGGACCCTTTTGAAAACCCTTTTTTTAAGCGCATTCATAATGCATTGTTTTTGATGTTTTTTTTGTAAAGAGGCGAAAAAAGGGATTGGGGAGGGATAAGCGATTTTAGTGCTTCTCATCAATACCTTATCACGCTATCTTTCCT
# Right flank :  CATCAGTAACCCTCTCGATAAGCGGAGCGGCACATTCCCTTAGATCTGTATCGCACCTTGATATTTTTTCCTGAACACCTTTTTTATTGACCTGAGGTAAAAGAGTGGAATTTTTTAATTGTAATTGCATTCGTTAAGTTATTAAGTGGTGGTTCATAAAAATCCGCCGCTCGCGAATGCTGTTATTGCTTGCGGAAATAACTGACAGGGATAGTTAAATTATGCTCGCACCGTCAGACCTCAAAACAATTTTGCACTCAAAAAGAGCAAATATTTACTATTTGCAATATTGTCGGGTGCTGGTTAACGGGGGGCGAGTTGAATATGTCACCGAAGAAGGGAAGGAATCGCTTTACTGGAATATTCCCATCGCGAATACCACCGTGGTTATGTTGGGTACAGGTACCTCAGTAACTCAGGCTGCAATGCGTGAGTTCGCTCGTGCGGGTGTTCTGGTCGGTTTCTGCGGCGGTGGGGGCACACCATTATATGCCGGGAAT

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGTACAGGCAGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [6,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.70,-8.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [4-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [48.3-58.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.92   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
//