Array 1 27831-28657 **** Predicted by CRISPRDetect 2.4 *** >NZ_PKIA01000005.1 Streptococcus salivarius strain UMB0051 .21837_8_78.5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 27831 36 100.0 30 .................................... TTTTATGATAAGCTTTGTTACCGTCTGACG 27897 36 100.0 30 .................................... CTGGTGGAGATTGTAAGAAACGGCGATAGA 27963 36 100.0 30 .................................... TATTCTGTTATTTCAATTTCTTTCAGTACC 28029 36 100.0 30 .................................... TGATACGTACCTTTGCTTAGTGTGGTCTCA 28095 36 100.0 30 .................................... GAGGTTAGAAGGTATCATTTCTGACGAGCT 28161 36 100.0 30 .................................... TCCACGCATCAAAAAGTTCACGCGGTAAGG 28227 36 100.0 29 .................................... CCGTGTCCATGCTCCATACGCACTTGAGT 28292 36 100.0 30 .................................... TAAGTTGTCCTTCGAATATGTAAGTGATCT 28358 36 100.0 30 .................................... TAAGTTGTCCTTCGAATATGTAAGTGATCT 28424 36 100.0 30 .................................... AAAATTGTGAACAAGCCGTCGTCTGACTTG 28490 36 100.0 30 .................................... AGAATTTGGTGAAATAAGCGAAGTATATGC 28556 36 100.0 30 .................................... AGAATTTGGTGAAATAAGCGAAGTATATGC 28622 36 94.4 0 ..................................GG | ========== ====== ====== ====== ==================================== ============================== ================== 13 36 99.6 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : TTGATAGTTTTATTTCAGAGGAATCTTATGGTAGTTTTTATAAGCAAATTGGTCAGCTAGTCAAAAAGTATCCAAACCTAACCTTTATTATATTTCCAAGTGACCAAGGCTATTTAAAGATTGATGAAGAGAGTAGTAGGTTCGTCAATATTTTATCTGATCAGGTAGAACATTTGTATGATATTGAGTTTATGTATGAAAGTGTAGCGAAACATTATCCAAGTAATAATTTTCCGACGCGAGAAGGTTTTAGGATGTCCTTAGAGACTGTGACGCCTTATTTGTTAACAAAAATGACGAGACAACCTAGTCTCTCACTCGTTGATTCAGTAATTTTGAATATCTTAAATCAGTTGTTTCACTTTAACTATTGTATAGGATATTCTCAGACACCTGATGAGGAGCTATTACATAGATATTTAGAAAGTAAGAATTGACAAGTACAGTGATTGATTCTATAATCACTATGTGGGTATAAAAACGTCAAAATTTCATTTGAG # Right flank : GTTGATTGATTCAACTTAAAAAGCCAGTTCAACTGAACTTGGCTTTTTAAAATACACGATATACATAAGGATTGTCAGGCTGACCAACCTCTTTGACCTCAGTCAAATTGAGAATAGGCAGGCTCTGTTTGAGATTTTGATAGTAATCCACAGTGATGGTACCAGTGACTTTTACCCAGGTATTGTCCTTAAAGGTTTGGTCACTTCCTGTCGTCGCCAGTCCGTAAACACCTGAATCGGCGATACAGTGGATAATTCCGAAACGGAAGATGAACTGATAACCCTTGGTTTGTGGGTCATTGTAGACAAAACCGGTATAGGTGACCTTCTTGCCCACGAAATCGTTAGGATAGAGGTAGATGAGCTCCATGACTTCCATGTAATTTTCCGTGGTAATCTGGATGGTGTCACGTCCCTTGTACTTGGCGAGCTCTCTGGTCATTTCCTTCTCATAAGCTGAGGAGGTGAAGTAGGAGCTGGTGTCCGGCTTCAAGTACTGA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //