Array 1 11676-12107 **** Predicted by CRISPRDetect 2.4 *** >NZ_LXZP01000045.1 Ligilactobacillus salivarius strain KLA005 NODE_4_length_87167_cov_4.94497_ID_7114, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 11676 36 100.0 30 .................................... TTACGGTAGAATGTATCTTCAATTTTTCTA 11742 36 100.0 30 .................................... GCTACTACTCATTGTGAACTTAAACTGGTT 11808 36 100.0 30 .................................... AGTACTAGCGGCTCATCTGCATATATACTA 11874 36 83.3 30 .............TTG..T..........GT..... CATTGAAGTTCGTATGGTGGATATCATCTA 11940 36 86.1 30 ............A.T.....A........GT..... ATAGGTTTAATGATTGCTCCAATGGTTGAA 12006 36 83.3 30 .......G....A.T......G.......GT..... TCACGTTTATGTGAGTGATTATAATTCACA 12072 36 86.1 0 .......G....A.T..............GC..... | ========== ====== ====== ====== ==================================== ============================== ================== 7 36 91.3 30 GTTCTGAACCTAGGCTAAATGACATAGGTTGAAGAC # Left flank : AACTAGCAAAAAACAGTTAAGGCTCCTTAATGTTTGTTTTGCTGTTGAAAAAGAAAGTCACATCTAGGGTTACCTAAGCTTGTGGCTTTTTTTATTTTTTAACTTTTTTGAATTTTATTTTAAAAAAGTATACAAAAACATTTGACTTAGAGTGTGAGATAGTGTATCATAATAAACGTAAGGCAAAGGGTTAAGCCTACAGGGACATCAGTAAACTACATGTAAGCCTCTATCGTTCCTGTAAGCATTAGCACAAGCCTTATAATCTTAACTTTATCTTTATTCATTTATGTACATTTTATGTGTAGCGATGCCAAACGGTAGATCAATGCAGGTGCAATTCCTGCCATCGCTATTGGAGGACGCTTGTTCTCGACAGCTTGGTTAATATCTTTGACCTCTGTATAATCGCAAATTGCATTAGTTTGTTTACGATTATGCAAGTCTGAAGAGTTCCCAAGAAGCTTATGCCACAATTAAATACAGGTTAGAAAATAACG # Right flank : CTGAAATCATGGGCTTAATTAAAGTCAAAACAACGATGTAGCTCAATGGTAGAGCAAAGCGAGGCGACGTAGGTTCGATTCCTACCATCGTTATTGGAGGGTGCTTGCTCTTCACAGTTTGGTTAACATCTTCGCAAACAAAGTTGCTGATTGCATTTCTTTGTTGAAGAGTTCCCAAAAAGCGCTGATAGCACAAATAAAGACGTCCATTGTGGAAGACTAATGTAGTGTAGTCAGCTGAAAGACTATACATAAATTACGTTGGTGTTTAAAAAGGAGTTGGAAAAAATGGAAGAAAAAGTTTTAGAAAGTCGTAGAATTAGAATTTATCCTACTAAGGATCAACAAGCATATTTAACGTTTAATATGTTTGCTAATATCAAGATGTGGAACGCATTACTAGCTGAAGTTTATAAGCCAGTTAGTGAGTTAGATGAAGTTCAAGCTTTACCTAGAAACAAACAAAGTAAAGAAGTTTATAAACGCATTGAAAGAATGTC # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:0.56, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTGAACCTAGGCTAAATGACATAGGTTGAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.00,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-22] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 2 14039-14273 **** Predicted by CRISPRDetect 2.4 *** >NZ_LXZP01000045.1 Ligilactobacillus salivarius strain KLA005 NODE_4_length_87167_cov_4.94497_ID_7114, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 14039 36 100.0 30 .................................... ATACTCGTGGTGTCTAATTATAAGACGTTC 14105 36 94.4 30 .........................G....C..... CGTGCCTTCGATTCCTTCGCTTGGGAGATC 14171 36 100.0 29 .................................... GTCTCAGGAGGAAAAAATCAAAAATATGA 14236 35 91.7 0 ............-...............C.C..... | G,AC [14253,14258] ========== ====== ====== ====== ==================================== ============================== ================== 4 36 96.5 30 GTTCTGAACCTAGGTTAAATGACATAGGTGTAAGAC # Left flank : TTGTGTTTATTGATCGTTGGTCACCAACTTCAAAGCGTTGCCATACTTGTGGTTACATTAAGCACAACCTTAAATTAAGCGACCGTAAGTGGACTTGCCCTATCTGTAATTCTCACCATGATCAAGACATAAACGCAGCTAAAAACATCTTAGATGAAGGCTTAGACTTGCTAGACAAAATGAATGATTCTTGCAAGAAATGTGGGCATGAGCGTACGGTTATTACAACAGACGAAAAGTGGACATGTACAAAGTGTGGAGCTAAAAATAAAACCACACCTAAAGAAGAAAATAGTAGCGATGTAGCCTAACGGTAAGGCAAGGTAACAGATGCAGGTTCGACTCCTACCATCGTTATAGGAGGACGCTTGTTCTCGACAGCTTGGTAAATATCTTTAACCTCTACAGTATCAGTTAGTTAATCTAGCAGAAAGATATTGCAAGTAAGAAGAGTTCCCAAGAAACTTATGTCGAAATTAAATATAGGTTAGAAAACAACG # Right flank : CATATAGAGGAGCCGATCAAAAAAATATTCAACGTTCAAATAACGCTTCAAGCATAACCGATTGCATAAGGGCTTTAATCAAGTCTTATCGGACATCTGCCTGTAATTCGTAGTAGGTATAGTCTGAGTGATAGCTTAGACAAGCCGAGAGATGATTGGTAACAATTATCAAACCTAGTAAAAGCTAGGACGTTTGGTAGGTGTGTGGAAATGTGTGACGTTAGTGCTTTGCTAACCGTTGGCACTGGATAAAATAGACGCTCACGGTGTGAGAATAACCCATTGGCAGCTTAGTGTGGTAGCTAAGTGATGTGATGGGAATAACCAAAGACAGTGTTTGCCTTGACGTTTAGGAAACTAAGCTATAACAACGGAAACAAGAACGAGTAGGGTAATGGCATCGAGATTACAGTAATTTCGCTACTGGACTTGAAATCCACATGCGACGATTAAGACAAATAAAATAATTCTGAATGATTGCCTGAAAGTTGGTACTTATC # Questionable array : NO Score: 2.68 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTGAACCTAGGTTAAATGACATAGGTGTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.50,-4.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //