Array 1 1767296-1767764 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP041723.1 Staphylococcus lugdunensis strain SL29 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	====================================	=====================================	==================
   1767296	    36	 100.0	    37	....................................	TTCTGTATTTCTATTAACCAATTCATAAGTGTCATTA	
   1767369	    36	 100.0	    37	....................................	ATATTTTACTATATGCTCATATCCGCCGTTTGTTTCT	
   1767442	    36	 100.0	    35	....................................	TTCATCATATCCTTTTATATAGTTTTTGTTTTGTT  	
   1767513	    36	 100.0	    37	....................................	CCAAATAATACTATTAATTTATCTGTTAATGCTGTGG	
   1767586	    36	 100.0	    35	....................................	TGGTAAATCTTCTACACTGTCGACTGGGTCTTCTA  	
   1767657	    36	 100.0	    36	....................................	TGTTCCAATTAGCTAAAGATGTTATGGACGGCAAGA 	
   1767729	    36	  91.7	     0	..............................A.A..G	|                                    	
==========	======	======	======	====================================	=====================================	==================
         7	    36	  98.8	    36	AATCAGAGAATACCCCGTATAAAAGGGGACGAGAAC	                                     	       

# Left flank :   GATTTTTTAGAAGTATCATGATACAATTTGATGCTTTTTTTGAGTCTCATAAACTTTATGATAAAGAAACATTGGAATTTTTAGAGCAAAATGTAAATATAGTTAATTATAAATTGAAAAGTGTCCGTTTTCATATGGAAAAGGTTAAAATTCCATCTTTTAAGGGAGAAATTGTATTTAAAATAAATGGGCCATTGCCGTTTTTACAATTAGTTTACTTTTTATTAGCTTTTGGAGAATTTTCAGGTACGGGTATAAAGACTAGTCTAGGTATGGGGAAATACAATATAGTTGATAAAAATCAAGATAACTAAAAAGTAGTTACACTTCATAGTCCATTTAAAACAAATCGAATTTATAGTATAATATATATAGGGAAATAACCTTTAAGTGTCAAATTTTTTGACAAATAAGGTATTACCTAGAGTTAGATTGTCAAAATTTTTGCCAATTTAAATTATCCTTCAAACTTAGGCAATACTGGATTGAAATTAATTGCT
# Right flank :  GATGTTAATATTAAGGTTTTTAAAAAACTAGATAATAACCAAAGCGCTAACTCTGCATTTGAGTCAGCGCAGTTTGTTTTATTATTTAAAAAATTTAAATGATTTTGACAATCTTAAAAAAGGTTCTGTTGATTTTAACAAGAATTAATGAAAAGTGTTGATAGTTATATAAAAAATTGGGAGATGTTGAAATTATGGAGGAAGTACTGGATTTAATAATAAATTTAGTTAAGTTATTTATTATAGTTCCGTATTGGTTGATTAGTGTTGGTGTAACTGCCTTTTTTTATTTTAAGCTTGTCGTGTTTATTCGGAATACATTTAAAGCTTTTTTTGATAAATACTTTTATGGCGAAGACAGTGACTCTATTCCTTATGCTGTAGGTCCATATATAATGATAATAACTGCTATGCTTATTGGATTAGGAATAGTTATGGTAATTGTTTTATTTTTTAATGCACTTTTAGGGCAAAATTTGTATACCCTATTATTTATAGTT

# Questionable array : NO	 Score: 6.20
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     AATCAGAGAATACCCCGTATAAAAGGGGACGAGAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-7.80,-6.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.78,0   Confidence: HIGH] 

# Array family : NA
//