Array 1 100723-94566 **** Predicted by CRISPRDetect 2.4 *** >NZ_BPNE01000006.1 Aeromonas caviae strain KAM337 sequence006, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================================= ================== 100722 29 100.0 32 ............................. CAGAAACGCCCGGTGATGCTTGGCACCTTGAC 100661 29 100.0 32 ............................. GACCCAGACCATGACCAAACCACATACCCGAG 100600 29 100.0 32 ............................. GTCACGCCGTCCACCAAGGATGATGAGATTGT 100539 29 100.0 33 ............................. TCGAGCAGGGGGCCTGGGGCCGTGGCTGGGATC 100477 29 100.0 32 ............................. CCTGGGTGCCATCAAGGCGATGCCGGTGGAAT 100416 29 100.0 33 ............................. TGTCGTACAGTTGTCATACATTTAACCCGTGGT 100354 29 100.0 32 ............................. GGGTCATCGCGGCGACACACCTCAACCCAGCC 100293 29 100.0 55 ............................. AGTCCACCTTGGGCGCCGAGATGAAGCAGGAGTTCCCCAGCACGCCACTGGAGGC 100209 29 100.0 33 ............................. CCTGGCACTCTTGGCGACCAAATCTGTGATGGT 100147 29 100.0 32 ............................. TATCGCTAGGCCCAGCAGTGCTGGGCCTTATT 100086 29 100.0 32 ............................. ACAGTCAGCATCCATGAATGCGGCCTACCGCC 100025 29 100.0 33 ............................. TACCACGTAGACGCCGCCCCATCCGCCGAACAG 99963 29 100.0 32 ............................. TTACAGGTCGTATTTTGCAGGTTACCGATGCC 99902 29 100.0 32 ............................. CTCTTGCCGGTGATGCGCTCGCGAGGGTGGTT 99841 29 100.0 32 ............................. CGCACCATCACCGGGGTAATAGAGTGGGCTGT 99780 29 100.0 32 ............................. CCCATCAGGTCCATCAGGATGGCGTTGTTGAC 99719 29 100.0 32 ............................. ACGGCTCTTTCCAACCTGATGCACGATGCCAC 99658 29 100.0 32 ............................. CAATGGGAATCCCTGCGTGGTGCGATTGAGCA 99597 29 100.0 32 ............................. CCCCTGTGGGTCCGCATGATTCTTGTCATGGC 99536 29 100.0 32 ............................. TCTGCTGCCGCCATGACCCAGGCGCTGGGGGA 99475 29 100.0 32 ............................. CACGTCCTTTCCGCCGCCCTGTACCAGCAGGA 99414 29 100.0 32 ............................. CCCGTAGGCATATCGGGTTGACGGAGATTAAG 99353 29 100.0 32 ............................. GAAGCGCACCAGCTTGCCCTGCTCGTTCTCGA 99292 29 100.0 32 ............................. GCGGGGATGCGACGCCCATCAGCGAAATGTTG 99231 29 100.0 32 ............................. CTCGCTTGGCTGCATTGCCTGCCGGAATGCCG 99170 29 100.0 32 ............................. TCTGCTGCCACGGCTGGGTGAAACATTCCAGC 99109 29 100.0 32 ............................. GGTGACGAGTGCCCCAAATGCCACGGCACCGG 99048 29 100.0 32 ............................. GCAGAACTGCTGCTCAGTCGTGTGCAGCGCTT 98987 29 100.0 32 ............................. CCGAGCAGGCAGAGCTGGAGCAGCTGCGCCAG 98926 29 100.0 32 ............................. GCATCCAGATCGAGCCGCAGCCCCGCTCGGTA 98865 29 100.0 32 ............................. GCCGCGCTGGGTACCGGCGCCAGTGAAACCGG 98804 29 100.0 32 ............................. TATTCCGCTTGGGCCTTGCTCATCACCACACC 98743 29 100.0 32 ............................. CCCTTCATCTACGCCACTAGCCTGTTCCGAAA 98682 29 100.0 32 ............................. GCCGTGTACCGAGGCAGCGGCCCTGCCAAGTC 98621 29 100.0 32 ............................. CCGCCGAGCTGGCCCGCCAGCAGGCCGAAGCC 98560 29 100.0 32 ............................. GTGGCGCAGAAGACGCTTGCCGGCGTGTTGGC 98499 29 100.0 32 ............................. CGGGAACGGCGTGGCGCCAACGTGGCCACCCA 98438 29 100.0 32 ............................. CCCCGCTCGGTAGATGGGCAGTTGCTGGATGA 98377 29 100.0 32 ............................. ATACCGCGCTCCAGCTGATCAACAGCACCTCC 98316 29 100.0 32 ............................. GCTCATGAGGCCGGACGAGATCACCCGGCCAT 98255 29 100.0 32 ............................. TCTGGCTGTCTATGGCCCGAGAGGTATACGGC 98194 29 100.0 32 ............................. TAACCTAACGTCCGCAGGTTACCCGCCAGTTA 98133 29 100.0 32 ............................. CTATACGGTCAACTATATTGCGGGCAATTTCC 98072 29 100.0 32 ............................. CCGAAGAGGAACGCACCATTCTCATACGTTGG 98011 29 100.0 32 ............................. GGTAAGTACGGCGCCACCATCTATCTGGATAA 97950 29 100.0 32 ............................. TTGTTAAATTCGCCCCCGTCCAGCTTTTCGGA 97889 29 100.0 32 ............................. CCTATGTCCAGTTGTTCGACCTGTTAACAGTT 97828 29 100.0 32 ............................. CCTTCAAATGGGACGAGAAAAACGCCGCCGCC 97767 29 100.0 32 ............................. AGTACAACCGCGAGCAGATGCTCCTGGCTGGC 97706 29 100.0 32 ............................. GTGGGCGCCCGCATGGCCTTCATTGCGGCCTA 97645 29 100.0 32 ............................. GAAGTTTCCAGGAACCTGCGGGCGCAGTGTTA 97584 29 100.0 32 ............................. AGGCCGAGCGCCTTGAGCTTGACGGCCTGGAT 97523 29 100.0 32 ............................. CTGAATGGCAAGTTCCGCGCTGACTGGGAGGA 97462 29 100.0 32 ............................. TCTCATTACCGCCCTAGGGGGCTCAAAGGAAA 97401 29 100.0 32 ............................. TTGGCCGATGCGAATGGGGTGAGCCGTGGCAG 97340 29 100.0 32 ............................. GCAGAGTGGCCTGACGCTGATTACGATTCCAT 97279 29 100.0 32 ............................. TCTCGATCCACTCTGGGTCTTTCTCGGAGTGA 97218 29 100.0 32 ............................. CAGCATCACCCGAGCGCATGATAGCTTGCGCC 97157 29 100.0 32 ............................. ACAGCAGAGACACCGGCGTCCATCAAGGTCAG 97096 29 100.0 32 ............................. CTGGCCAGTGTGTACGGCCGGATTTGGGTCGT 97035 29 100.0 32 ............................. AAAGCCACTCGAACCAACACCAACGCCTGGCG 96974 29 100.0 32 ............................. TGGCTAATATGTGTTATCCGTTCCTGTTGTTG 96913 29 100.0 32 ............................. GAGAAGGCGATGCCTATCCCAGTCAGTCAAAT 96852 29 100.0 32 ............................. ACAACGTAATGCGACTGTGGCACGGCACCCGA 96791 29 100.0 32 ............................. GCATGATCAGGTGATCGGCCTCGTCGTTCTCT 96730 29 100.0 32 ............................. TATGGCGGCTCGTATGTGGCAGCAACTCCGGC 96669 29 100.0 32 ............................. GATCCGACCGTGGGCGACAATGCCGCCGAGAT 96608 29 100.0 32 ............................. CCTAACAGCTAACAGCCCAAGGGCTCTATCAT 96547 29 100.0 32 ............................. CAGATGATGCTCTATGCGCTTGGCCTGCTGCG 96486 29 100.0 32 ............................. CAGATGATGCTCTATGCGCTTGGCCTGCTGCG 96425 29 96.6 32 ............................C GACGATCTGAAATCGTCCATTGTCGGATGGCA 96364 29 100.0 32 ............................. GAGAGACGACCATGGCTCGTACTATTACCAGC 96303 29 100.0 32 ............................. GCCGTCCAGGCGAAAGAGACCATCACCCGTTC 96242 29 100.0 32 ............................. ACCGAGGCCGCGCCGCTCTGGATTGGTGATGA 96181 29 100.0 32 ............................. CTGACTACATGGCCAAGCGCGAAGAGGCGATG 96120 29 100.0 32 ............................. CTACTAGCCGTCCCAGTCTGCACAATCCCGCC 96059 29 100.0 32 ............................. CTGGTTATTGCCGGCGCCTGGGCGTCAGGATC 95998 29 100.0 32 ............................. CCAGATTTCTTGATACGCTTCACCATAGATAA 95937 29 100.0 32 ............................. CGCAGCGTCCGGGAGGCCCCGCCGTACTGGAT 95876 29 100.0 32 ............................. CAGGAGGCACTGGATCAGCAAGTCCAAGATGA 95815 29 100.0 32 ............................. ATCTCACCGCTACCTCATCTATAGGCACCGTT 95754 29 100.0 32 ............................. GATAGTTGAGCCGTTGGCGCTATCACGGAAAA 95693 29 100.0 32 ............................. GCGGCGGCGGCCTTGCTGTCTGCTGCCTGGTA 95632 29 100.0 32 ............................. CACCTGGTTGCGCTCGCTGGCACTCCGATAGT 95571 29 100.0 32 ............................. TTGAGGCCGTTCTGCTCGCTGTCGAAATCTGA 95510 29 100.0 32 ............................. TCGAGAGAATCAAACTCGTGTTTTTGATCAGC 95449 29 100.0 33 ............................. GCCACAAATATAGAGGTGCCGGACTGGACTTGC 95387 29 100.0 32 ............................. TCGATGTAAGGGCATTCAGCGCGGATTGTCAC 95326 29 100.0 32 ............................. TATCTCCCACCCGGCCCGGCAACTGACCGAGA 95265 29 100.0 32 ............................. AGCTGGGTTCGCCTTCCAGCGAAGAAGTGAAG 95204 29 100.0 32 ............................. CTGTCACAGTTGCACCGGGACGAGTTTCTGAC 95143 29 100.0 32 ............................. CTGCCGATGGCGGCCTTGGCCGGACCGTCCGG 95082 29 100.0 32 ............................. AAGGCCCAGGCGATCATCTGCTCACTGGCGAG 95021 29 100.0 32 ............................. ATGCTGGACTCGCTGATCCCGTCACCGGTGAG 94960 29 100.0 32 ............................. CAGATCGCCATCTATAACGTTGGCGCTGACGG 94899 29 100.0 32 ............................. GGCATCGCCCAAGCCGGTCATCTGCTGGTCGA 94838 29 96.6 32 ..............T.............. CGCGTCGAATGCTGGGGGTATAACGATGGAAA 94777 29 100.0 32 ............................. CCTGCTGTCGTGGCGGGTGAAGTCGCCGCCGC 94716 29 89.7 32 ........T....T.............T. TGGAACCAGACGTTCAGGTCCAGCATCAAGGT 94655 29 96.6 32 ............T................ GATGGAGTGGTGGCGAAGACGCGAATCCAGAA 94594 29 96.6 0 ............T................ | ========== ====== ====== ====== ============================= ======================================================= ================== 101 29 99.8 32 CTGTTCCCCGCGCCCGCGGGGATGAACCG # Left flank : CCGCTTATCGAGGAGGTGCTCTCGGCCGGGGGCATCACCCCGCCAGACGCCCCTGCAGATGCCCAGCCGCCCGCCATCCCCGAACCCGCCGGCATGGGGGATGCCGGTCACAGGAGTCAGTGATGAGCATGCTGGTGGTGATCACCGAGGATGTGCCGCCGCGCCTGCGCGGCCGGCTCGCGGTCTGGTTACTCGAGGTGCGTGCCGGTGTCTATGTGGGAGATGTGTCGCGCCGGGTGCGAGAGATGATCTGGCAGCAGTGCGAGGCTTTGGTGGAGCAGGGCAATATCGTGATGGCCTGGCCCGCTAATAACGATTCTGGTTTTGACTTTCAAACCCTGGGGACCAATCGCAGGGTGCCGGTGGACCTCGATGGTTGCCGATTGGTCTCTTTTCTACCCATTGAAAATCAATAGCTTAGCGTTCATTAACAATCTGGACTAGTCGGTGGGTTTTCTATGGTTGGAAAAAGCCATCAAAATCAATAGCATCTGTTAAGT # Right flank : AATCTCTTCGGCATGGCATGCTCTCGATTACGTGCTAGTGTAATCGTTCTGGCTGTCATTGTTTGATCAGCAGCGAGAGCTGATAGCGGACATTTTCTAACAGAGCAGCTTTAATTTGGCGCGTCGGGTTTCGATTTTGGGTGTCATCTGATCGCGTGTGTAATCACCCGTAACGAGACAAGTGAATTTTTTGACGAGCATTGAGCGGCGGATTTACACGCCTGCGGCTTTCCCACTCAAATCACCATGATCATTACCAACCCTAGACAGGACGTGGCTTTGCTAGTCGCCAGCCTTCTAGGGATAGGTGATCAGGTAAGGCTTTTCTAATCAGATAAGGTGATCGGATCAGGCAACGCTGATCTGATCCGATGCACCTGATCACCTCTCAAATTTTCTCCAGATACCAGCCCCATGGTTCGTTTTGAGCACCTACTTGGCATGAGACGAACTGCCAGCCAAGGTGGTACAAGTCATTATTTAAACGCCGAAACACCATT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCGCCCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGCGCCCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //