Array 1 59946-68652 **** Predicted by CRISPRDetect 2.4 *** >NZ_MRAD01000007.1 Clostridium tepidum strain DSM 18688 scaffold_6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 59946 29 100.0 36 ............................. TTTTTTGTTTCATCTTCTCTCGCCAATGCAGACGCT 60011 29 100.0 36 ............................. CTTTTTATATAGGTTCTTGCATTTAACACCGCACCC 60076 29 100.0 37 ............................. GTGATGTAGTATGGCTAATGTATTTGATACTACACAA 60142 29 100.0 39 ............................. AGTCCAATATTATCAATTATTATGCTATTAACTCGTACT 60210 29 100.0 37 ............................. TCTATTATGCAATCTTCATGTGGACAGTAACAGCATA 60276 29 100.0 38 ............................. CCTTTACGTTAATAGTTTCTTCTTCCACTACATCTATA 60343 29 100.0 39 ............................. TTATCTGCTAAAAAATCATAGTCATTTAAAAGGTTAAAA 60411 29 100.0 36 ............................. AGATTAAAAAAGGACAAGTTAATGAAATGTTATATA 60476 29 100.0 36 ............................. GTTATTTTCTGTTTTGATATTAAAACTGTTAAAATC 60541 29 100.0 39 ............................. GATTTTAAAGATTCTACTTTTTTAATACCTCCTAAGAAA 60609 29 100.0 39 ............................. ATCATAAGGTATATACCCATCCGATTGAGCTAATAAAAC 60677 29 100.0 38 ............................. CTATTTGATATATTGTTTAAAGTTTTTGCCTGTAGTCC 60744 29 100.0 38 ............................. TCTTTTGAAGTTACAACTACTCCAACATCAGTATTTAA 60811 29 100.0 38 ............................. GAGCTTTCTGAGGGTCTTCTGAAGCATTTTTAATGCCC 60878 29 100.0 34 ............................. CTTGCTTTACTGTTATAAATTTGTTCCTTACCAT 60941 29 100.0 38 ............................. ATACATTAAACTATCAACAACATTATATCACTTAAACA 61008 29 100.0 39 ............................. TATGCTAAATGTGAAGGACGCTTCATATCGGTTGTTATT 61076 29 100.0 38 ............................. CCCTAATATAATATTTTTAAATTTTTATCAATTAATCA 61143 29 100.0 37 ............................. GTAGGTGCTTGAATTATTATATCTTGGGCTTCTTCTA 61209 29 100.0 39 ............................. AAAGGACTATCCTCTCTACATTGTTTTAAAAATTCTCTT 61277 29 100.0 37 ............................. CACACCTTTGCAGGTGTTTGGTTCACTTCAACATTAT 61343 29 100.0 36 ............................. ACGTCCTACCCTAACTAATAAGAATAAGAGAACCCT 61408 29 100.0 36 ............................. TATTATTTAATTTCTATCTCGTATCTTTAATTATAT 61473 29 100.0 38 ............................. AAAGAAGAAGCTTACAAAGCACTAGAAGAAAGAGCAGG 61540 29 100.0 38 ............................. CTGTAAAATCTGCTGTTTTATACACCTTACCATTTACT 61607 29 100.0 38 ............................. GGCAGTACAACATATAAATATGACTTGCTTTATGACGA 61674 29 100.0 37 ............................. AATAGACGGAAATACAAGTAAAATTTAGAAATATGAC 61740 29 100.0 37 ............................. CAACAAATACAGGATACCGAAGTGCCGCAACAAATAC 61806 29 100.0 37 ............................. AAGAGAAGACGTAGAAGAAAGGAAGAAAAAATAAATG 61872 29 100.0 36 ............................. AAAATGTTGCAGTTCTATTCACATAGCACATGCAAG 61937 29 100.0 37 ............................. CAATATAAAAAATTTGGTTTACATTACTTTCAGTTAT 62003 29 100.0 40 ............................. TTCTATAAAAAAATATGGTTTTGGGTACTCGCAGTTATAG 62072 29 100.0 37 ............................. ATATTAAATTATTTAACTGTAGCTTTCATTAACCCTC 62138 29 100.0 37 ............................. AAAACAGAAGGAACAACTACGGAGGAGGGTGAATAAT 62204 29 100.0 36 ............................. AAAACAATCCCTGCAGCTAGATTTTTAAGGTTGAAT 62269 29 100.0 38 ............................. CATTTAGATACTTTTAATAATGCTATAAAGGTTAATGT 62336 29 100.0 35 ............................. GAGGAAATTGAAGCTGAAATATTAAAATTGGCCAA 62400 29 100.0 36 ............................. CTCTGTTTTTAAACTGTTTTCAAAATCACATTGAAC 62465 29 100.0 38 ............................. AAGATGAAAAAGATAAATTAGAAGAAATAAATAATATT 62532 29 100.0 36 ............................. AGAAAGCACTATAATCATTTTTCTTTCCTCCACCAC 62597 29 100.0 36 ............................. GTCCCATGCGTGGTAGAAAGTATGATAATTGCCGTC 62662 29 100.0 37 ............................. GGAGTAGGACAAAATGAGTTGTATTCTAATCCTATAG 62728 29 100.0 35 ............................. GAAGGCTATGAAGATGAAATTGACGACTATAACAT 62792 29 100.0 38 ............................. TTCGCTAACGCAATGTATTTTGGATTAGCTAATTTATT 62859 29 100.0 35 ............................. TTTAGTAAGACAACTAGACGCAGAATGTGCTAGAC 62923 29 100.0 38 ............................. TAGAAGAGATAAGAGAAACTATAAGAATCATAAACAAA 62990 29 100.0 35 ............................. GTATCTACTTAATAGGATCTATGGTAATCCTACTA 63054 29 100.0 37 ............................. ATTATTTTTTGCTTTTCTTCTTTATTCATTTCATTGC 63120 29 100.0 38 ............................. TTATTCTTCTCTTCATTGCAGCCTTTGAAGAATCTCTT 63187 29 100.0 36 ............................. AGTTATGATGTTCTTATAAAAATAGCCGATTATTTC 63252 29 100.0 37 ............................. GTTGAATTTAAAAAACAAAGAGTTATAACTACAGAAT 63318 29 100.0 38 ............................. TTCTCTAAAATAAATTTATTTTTATCAAAATCCCAAGC 63385 29 100.0 38 ............................. ATTAAAGGAACTATTGAGTTAGCTAAAAAAGGTGTTGG 63452 29 100.0 37 ............................. TTGCATCCATAACAGTTTTACCAGGATTAAGTGCAGC 63518 29 100.0 38 ............................. CAAAATTTTGCAAAAGAAAGTGGATTATCTTATCAACA 63585 29 100.0 39 ............................. TTTAATTCAAAAGCTTGTTGTCCTCCACTCATTCCATCA 63653 29 100.0 38 ............................. GCTAAAGTATATGACTTTTGTCAGTATACAAATTTCCC 63720 29 100.0 37 ............................. TTAACATAGTTATAAGTGTGTTTTGCATTACTATCAG 63786 29 100.0 38 ............................. AAATAAGCAAAATAAAAAGACCTTGAAAGGTCTTCTGT 63853 29 100.0 37 ............................. AACGATACTGAAATACTAGATAAAGCAATACAAGAGA 63919 29 100.0 39 ............................. GAAGAAAGAGATATAATGACTACTTACTGGTTAACTAAG 63987 29 100.0 37 ............................. CTATTCCATAAATAGAGATATACTTAAGCAGATCCTA 64053 29 100.0 38 ............................. TACTTAAAAGATATATATAATTTAAATATTACAATTGA 64120 29 100.0 35 ............................. AATACCAATTAACTACTATGAATTAATTGAAAAAG 64184 29 100.0 38 ............................. GAGTTTTTATTTGATGATGAAGTGTTTAATCAGATTAT 64251 29 100.0 40 ............................. ATTGCTGTATTTTTATATTTTCTTAATGTAAAGATTTCAT 64320 29 100.0 35 ............................. GTGGCAGGGAGTGGGGCAACACTAAGAGCTTGCAT 64384 29 100.0 37 ............................. GAACTAAAATTAAGAAGAGAATATGAATCAGTAAAAG 64450 29 100.0 38 ............................. ACTATAAAACCAGATGTAGACAATATAGCGAAAGTTAT 64517 29 100.0 39 ............................. AAATTTAATAATGGTAGAAAAGTCGACGAAAATGGTAAA 64585 29 100.0 38 ............................. GGATTTAAAAGAAGCTAATACAAAAGATAAAGTATTTA 64652 29 100.0 38 ............................. TATTACTTTATTAATACTCTAGTACAGTTTAGGTGTAG 64719 29 100.0 36 ............................. CCGATATAAGGCATATCTTCAAATTTTTTAAGTATA 64784 29 100.0 38 ............................. CCTTGTAAGACTTTAGATCAATGCGACTACGGTTTCAT 64851 29 100.0 37 ............................. GTTCAAGGCAAATTAAAATAGGAAATGTTTTAGAATT 64917 29 100.0 36 ............................. TTTAAATTTATTCTAAATACATATTGTTTTGGTATA 64982 29 100.0 39 ............................. GAGCATTTTAAGAATCCAGCAAGATATTTAAGGGGGAAC 65050 29 100.0 38 ............................. TAAGGTGGGTGATTCGCTCTCTACTAGAGGTTAGGTGC 65117 29 100.0 39 ............................. ATTTAATGCATTGCTTATAGAAACTATAATCTGATTAAA 65185 29 100.0 38 ............................. CTTTTTTAACCTCTTGTTTAACACTAGTTTCAGTATCT 65252 29 100.0 38 ............................. AACGGGGTTAATGGCATAATAACTTACAATAGGCGCCC 65319 29 100.0 38 ............................. GAAGAGTACCAAATTATAACTGGTAAAGAATTCACAGT 65386 29 100.0 36 ............................. CTTTTAAAAGAGAATAAAGCAATAGTAAATTTAACA 65451 29 100.0 37 ............................. GTAGCATATCATAAAAACTTAAATTACTTTCTATACC 65517 29 100.0 36 ............................. TAGTATGTGGTAATACAGCTTTGATTTTCACATCTT 65582 29 100.0 37 ............................. ATGTGGTTGGTGCAGAGCGTGTGGCAATCAAAGACGC 65648 29 100.0 39 ............................. TATGTCTATTGACCATGTACATGTTTGGGGAAATAACTG 65716 29 100.0 37 ............................. TTAATCTTCCATGCCCTATCTAATAATTTTCTATTAT 65782 29 100.0 36 ............................. AAACAGACCTATAACAATTGCAGCAAAGGATATGAC 65847 29 100.0 38 ............................. TTGTTCAGACAAGCTATGACGAATGGTTGGAACTGCTA 65914 29 100.0 38 ............................. TCTTTAGAAATATTAGAAAAAATTGCAAATGCCTTAGA 65981 29 100.0 37 ............................. AATGACTTAAATAAGGAAATGGCTCTCCAGCTATATA 66047 29 100.0 37 ............................. TGTTTTATAAGTTAACATCTAAAGAATCTACAACATG 66113 29 100.0 37 ............................. GTTTCATGTTTAAGGTACTCCTTAGCCATTTCTTTAG 66179 29 100.0 36 ............................. AGTAATATAACTGAAATGAGTTCCTATAACCTGTGA 66244 29 100.0 38 ............................. TAAAACAAGGTTCTATAATGGAAAAACTGAAAGGAAAA 66311 29 100.0 36 ............................. TACTAGGATTTATTGATTTATTATTTTCTAAATCAC 66376 29 100.0 39 ............................. AACATTTTTATTACTCCTTTTTATTCGCTTATATAGAAT 66444 29 100.0 37 ............................. GCACTGTATTAACTAAATCTGTGCTGGCTGGTTGCAT 66510 29 100.0 37 ............................. GCTTTAGCCGCTGTTAATCCCATAACTGAATATTCGC 66576 29 100.0 38 ............................. ATAATAAAAACATATCGGAATATTCCTGGGAGGAATAT 66643 29 100.0 38 ............................. TTGCAATGTTTAAAGTTGTAGACAAAGATGGTAGACAA 66710 29 100.0 36 ............................. ACAACCAGTATGAACTGCAAGAAATATGGTTGGATA 66775 29 100.0 36 ............................. TAAAGAAGAAGCTTACAAAGCACTAGAAGAAAGAGC 66840 29 100.0 38 ............................. AGTAATAAACTTTACACTTGCAGTAAATGTAAAGCAAA 66907 29 100.0 37 ............................. TCCGAAACTGTAGCAGTAGATTTAATAGCAATATGTA 66973 29 100.0 39 ............................. TCATATTGTTTATTAGCTTTATCTACTGCCCCTTGCCTT 67041 29 100.0 38 ............................. CCTTATCCCCTCCTTATTAGTATTAACCAACCGTTAAT 67108 29 100.0 35 ............................. TTACAAGAAAATGATAATGGTGAGATTTTAGTAAG 67172 29 100.0 37 ............................. AAATGAGCAAGGTGCAAGCTATATCTGGAGCAACAGG 67238 29 100.0 39 ............................. TTGCAACATTTGTGCTTGCAGTTGATAGAAGGTTTGCTA 67306 29 100.0 37 ............................. CAAGAATTAAAATTAAATCAACAAGAATCTCTTACAA 67372 29 100.0 37 ............................. GCAGATATGGCAATAAGACAATTATTAAATGGTATGG 67438 29 100.0 37 ............................. GGAATAACAACTATAATCATGGGTATAGGAAATGCTA 67504 29 100.0 35 ............................. TAGGTGGATATATGGAACTCGATAAAAAAGCAATG 67568 29 100.0 37 ............................. TTATTTATTCTATGCAAATAATAGAATTTTATACCAA 67634 29 100.0 39 ............................. ATCTTATCAATCCTTTTTTTCTCATAATAGTTTTGTGGA 67702 29 100.0 36 ............................. GATGTAGACTATAAGGCACAATTTGGGATATGTCTT 67767 29 100.0 39 ............................. TCAAATATTGTTACTTTATCTTTTTTTAGTATTATTTTG 67835 29 100.0 38 ............................. ATGTGGAGAATTAAAAAACTTACAGAAGAATTTGGACC 67902 29 100.0 37 ............................. ATTTGACTAGAGAGGTAGGTACAAAAGTAATAAGTAA 67968 29 100.0 37 ............................. TCTCTTTTTACTGTTTTAGATAATTTAGATAATTTAC 68034 29 100.0 35 ............................. GCAGAAAGACACCATATAGTTTTTAAATCTCAAGG 68098 29 100.0 37 ............................. AGGATAATATGTAATTATAATTGCAAGACATGTAAGG 68164 29 100.0 36 ............................. CCTTGTATACTTACCCCAGATGCCCATTGTAAAATC 68229 29 100.0 36 ............................. AAATAGAAGTACTGGTCATAAATATTATATTAACTG 68294 29 100.0 37 ............................. ATGGAAACTTGTTAGAGGAGATAAAGATTCTTTCCGA 68360 29 100.0 36 ............................. GTTTATAACTGTTCTTCTGTTCACTCCAACTTCTCT 68425 29 100.0 37 ............................. ATTATTTAGAAGTAGCAGGTGCATTTGAGTTACTAGG 68491 29 100.0 38 ............................. AACAATTCATTAGTAGTTATGTTAAGAGCTTTCGCTAC 68558 29 100.0 37 ............................. ATTGTGAAACTGTAGAATCCTTAAAGCTATTAAACTC 68624 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================== ================== 132 29 100.0 37 CTTTTATATTAACTATGTGATATGTAAAT # Left flank : ATAGGTGATGATAGGTATAAACCATTAAAGGCTTGGTGGTGATGATTTATGTTTGTTATATTGACATATGATATAGAAGAAAAGAGAATTAATAGAGTTAGAAAGTTACTTAAGAAATATTTAGTTTGGACTCAAAATTCTGTATTTGAAGGAGAAATAACAGAAGGAAAGCTACATAAATGTCTTTCTGATGTTAATAAATTAATTGAGAAGAAGTTTGATTCAGTATATGTTTATAGAGTAAAAAACTCTAAAAATATAAAAAAAGATGTAGTTGGAATAGAAAAAAGTTTTGATGAACTATTTTTATAAGTAATTTTGCATTAAACCTAAATTTAAATTAATTAGGCTTAAACCATTGAAATTACTAGGTTTCTTCACAATAAAAAGTGAATATTAAAAACGCTAATGAAGGTTTACTGCAAAATGTAGAAAATATGATAAACTCATCATTGATGTAAATCCAGTAATATCAGTGCTTACAGACTTTTAAGATTTTG # Right flank : TTTTTAAAAAATTTTTAAGTTGTTGGGGAGTTAAATATAGAATTTCTTTAATAGATTTAATTTTTATTAAATCTAGTTTGAGATTATCAGAAAGAATTTATATTATAATTAATAAAGGTAGAAAAAAATTTGTTTTGATTTTATTTATGTAAGTTTATAAGTTTATAAATTTATTATATGAAGGATTTTTAAATTTATTATAGAATACTTAGTGTAGTCAATTAATAAAATATTATATTTTATTTGATTAATTTCTTAATAGGGGATAAAGTATAGAGTTTTTAAATTCAAGGGGAACTTTTACTTTTAATAAAACTTATAAAAAAGTTATATACCGGCAACTGATTCTTATTTTATTGTTACTTTTCTCTTAAAAAAACTTATAAAATAGTTATCTAAAGATATAAGAGTAATTTTTATTTAGCTGATAGAGCAATTTACATAATTTATAATAGTGAAATTGCACCAAAATTATTAAGTTATCTAAAGGTATAAGAGTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTATATTAACTATGTGATATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.76%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [71.7-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //