Array 1 3862-3298 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JVIX01000070.1 Streptococcus parasanguinis strain 392_SPAR 191_42463_848561, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
      3861	    36	 100.0	    30	....................................	CTTAGGATCTTCTTTTGGTTTTTCTTCCTT	
      3795	    36	 100.0	    30	....................................	AGTAAAAGCCTCTGGCAACGAAGCCAAGAC	
      3729	    36	 100.0	    30	....................................	GCGTAGCGGTCAAATTGTCAAACTTAATGC	
      3663	    36	 100.0	    30	....................................	CGACGAAATTCTAAAGCGTTGCTCCGGATA	
      3597	    36	 100.0	    30	....................................	AAGAAGATATTGATTTTATTACAGCGGTAT	
      3531	    36	 100.0	    30	....................................	ACGACCTTCTACAAGGTAACCATTGATACC	
      3465	    36	 100.0	    30	....................................	CATCCGTGGAGGAAGACTGACAGCAAATTC	
      3399	    36	 100.0	    30	....................................	CATCTAATAGGGCATCTAGCGGGTCAATTT	
      3333	    36	  94.4	     0	....................T.....A.........	|                             	
==========	======	======	======	====================================	==============================	==================
         9	    36	  99.4	    30	GTTTTAGAGCTGTGTTGTTTCGAATGGTCCCAAAAC	                              	       

# Left flank :   ATCAATTGAATGAAAAACCAGAAGTGAAGTCAATGATAGAGAAATTAGTCGTAACAATTACGGAATTATTAGCTTATGAGTGTTTGGAGAATGAATTGGATCTAGAATATGATGAAATCACTATTCTAGAGTTGATCGAAGCATTAGGTGTTAAAGTAGAAACAATAAGCGATACTGTATTTGAAAAGTGCATGGAAATTGTACAAGTTTTCAAATATCTATCTAAAAAGAGACTCCTTGTTTTTATAAATGTAGCTGCTTACTTATCAGAGAACGAAATTGAAAGTTTAATAGAATATATTGGATTAAATCAATTATCTGTCTTATTTTTAGAACCAAGGCAAGTCTACAATTTTCCCCAATTTATACTAGATAAAGATTATTTCTTAAATGCTGAAAATATGCTATAATAGCAGTAATGACGGGATTCAGACGGACTGAAGTCTAGCTAGGACGAATGGCGCGATTACGAAATTTCGAAAGAAAAATCATTCTACGAG
# Right flank :  TTATTTTTTGTATGATATAACAGAATATTTTAAAAATGAAGGTTTTTTCTATGGAAGGTGATGTGTTTTTTGATTATTATTTAAAATCACTTAGGTTTTATTTTGGTGATAGGTGTAAGGAAATTGGATTTATAAAATTTTTCAAAGATGAAAACAATAGTTTTATTACTATAGAGGATTATGTTTTGGAATCATTTGTAGTATTGTCAAATATTTTGAGTACGGATAGGATTGTGTTTTCTTGTGGAATTATTCATAGTAAGGGGGTAGTTACTGGAGTAGAAGTATGTATGAATGTATCAGAGTTAGAGAGATTAAATAAATTGTATAAGATATAGTTTTGATGAATATTAAAAAACATAAGGGTATTTATCTACGTGGGATGTGTGGAGTGATAGGATTAATGTTTCCTAGTTCTAGAGCTCTGTTGTTTTGAATGATCCCAAAACAAGAAAAACAAAAAATGATTGTCTAGGAGCTCGATACATTGAGCTTCTTTT

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGTTGTTTCGAATGGTCCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:58.33%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 98% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-1.30] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [2-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [78.3-60.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,5.28   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//