Array 1 393318-393046 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSDQ01000577.1 Seonamhaeicola marinus strain B011 scaffold2383, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 393317 46 100.0 29 .............................................. TTCTTGTAAAACGTATATCTTGCATTGCA 393242 46 100.0 30 .............................................. TGGATATCCAGTAAGAACTAATGAAGAAGT 393166 46 100.0 29 .............................................. TTCTTGTAAAACGTATATCTTGCATTGCA 393091 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 4 46 100.0 30 GTTGTGAATTGCTTTCAGTTCTGTAATTTTATAGATGATTCACAGG # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTGCTTTCAGTTCTGTAATTTTATAGATGATTCACAGGGGTAATATAATTGGTTCGGTTTCAACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTGCTTTCAGTTCTGTAATTTTATAGATGATTCACAGGGATAAAGTTTCAAACCCTTAAAGAAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTGCTTTCAGTTCTGTAATTTTATAGATGATTCACAGGAGTTGATGTTAACGGTGCTTCTGTTCTCGT # Right flank : TTTCATGAAACTTTTGCAAGTAGTTAATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTTTCAGTTCTGTAATTTTATAGATGATTCACAGGTGGAGGAAATATAAGAGTTCTTTCTGATGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGCTTTCAGTTCTGTAATTTTATAGATGATTCACAGGAATATCTGTGTTTTTGAATCTCCAGTCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.66 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAGTTCTGTAATTTTATAGATGATTCACAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAGTTCTTTAAATTTATGGATGATTCACAGG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [35.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 2 394116-393919 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSDQ01000577.1 Seonamhaeicola marinus strain B011 scaffold2383, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 394115 46 84.8 30 NNNNNNN....................................... TAATCCAAACGTAGCAGATAATAACGGTTA 394039 46 97.8 29 .T............................................ GCTTGGTTTAGTAAAACACAAAAGGGTAT 393964 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 3 46 94.2 30 GCTGTGAATTGCTTTCAGTTCTGTAATTTTATAGATGATTCACAGG # Left flank : CATACCTATTTTTATTATTGCAACTCTGTTGCATTAATAATTTTCAAATATAGAAACAATATTCATATTACGCATACTTGTGTAAAGTATTTTTGGGATGTAGTTTCTGAAAAAAGGTTGTGATTATTTTAAAAAATTAAATGGGAAACTATGAAGTCAAGGCTCTTAAAAGATTACATAAAAGTAATAAATTTTTTAATTTAGTTTTTTAGTTCTATGGATGAATTTACATAAAATTAGTTTGTTATCATGTTTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTGCTTTCAGTTCTGTAATTTTATAGATGATTCACAGGAAAAAGTGTTTTATAAAGAGCATCACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : TTGATTTAAGTTTATAAAATATTCACGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTGCTTTCAGTTCTGTAATTTTATAGATGATTCACAGGGGTAATATAATTGGTTCGGTTTCAACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTGCTTTCAGTTCTGTAATTTTATAGATGATTCACAGGGATAAAGTTTCAAACCCTTAAAGAAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.07 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGTGAATTGCTTTCAGTTCTGTAATTTTATAGATGATTCACAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.18%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAGTTCTTTAAATTTATGGATGATTCACAGG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //