Array 1 11337-12553 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWUR01000021.1 Staphylococcus delphini strain 15S02591-1 NODE_21_length_38160_cov_72.6355_ID_41, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 11337 36 100.0 29 .................................... CGTATGGCAGAAGAGATGGAAGGCGGTAT 11402 36 100.0 29 .................................... CCAAATTTGCCCCCTGAAATTGAGGTTAC 11467 36 100.0 30 .................................... TTCATGTGTTAGATTTTGTGGTTGAGGGCA 11533 36 100.0 29 .................................... ACGTTTATTATCTGAACGCCGTTTTTGCT 11598 36 100.0 29 .................................... TGCCATTTTGTCTGTCGCGCATAACCGCA 11663 36 100.0 30 .................................... ACCTTGGAAGTATCAACTTTAAGAACACCA 11729 36 100.0 30 .................................... AATATACAGATGAAAAGTATAATGAAGCGA 11795 36 100.0 30 .................................... CATGACTGTACTAGAAATGAAAGAGTTTTT 11861 36 100.0 29 .................................... GCAGTTGGAGCTTTAATGATTGCTGAGCC 11926 36 100.0 30 .................................... TGTTTTTCTATACTCAGCATTGAGCACAGT 11992 36 100.0 29 .................................... TTATTTTTGGAGATAATCCATTAATGCGC 12057 36 100.0 30 .................................... TGCAAAATGGTTACAAGGTTTGATGTGGGG 12123 36 100.0 30 .................................... GAAAAGTTGGCAAACGACTTAATAAAATCA 12189 36 100.0 30 .................................... TAACGCTTTGAAATATAAGAGAAACACAAA 12255 36 100.0 30 .................................... ATATCATACTGCTTAGCTTCTCACGCGTGC 12321 36 100.0 29 .................................... CCTAACATCAAACACATTACCTTTAACAA 12386 36 100.0 29 .................................... CATTAAGATGGATAATATTCTTTCTATTC 12451 36 94.4 30 AG.................................. AAGTAAGTTCGAATTCGCAACGAGTAATGC 12517 36 86.1 0 .......................TG..T.TA..... | C [12549] ========== ====== ====== ====== ==================================== ============================== ================== 19 36 99.0 30 GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC # Left flank : ATTATTTCCGGAGTCTCACTTGGGTATTCGCGATATTAAAGTATTTATGCAACTATTAAAGAAGTATCATTTCACAACAATTGTTTTCACCAATCATCCTTCTATCATCATTAATGAAGAAAACATATTTCTTTGTAAAATTAATAAAGAGTGTCATGACATTGAAAAAATAAAAGAAGAACTATCGTTATTTATTCCAGAAGAGATGGTGAGACATCAATTGACTAACATGATTGCTTATCACGAGTTTTTAGGTGAAAATCTTTCTGAGTTTGAACGTTATTTTAAGTTTATAAATCATTACAATTAAGTTATACTAAACACAATATAAATGGTTCGAGGATTGAAATACAAAACGATCAATGAGTAAGTTATAGCTATGTGACTTACTTCGTGATTAAGTTGAATTCCTATATCATTTGAGCATAATGATTTGCTTCTTTTATGTGTGCTAAGCCTCAATTTGATACAGAATCGAGTTGAGATTTTTGGAATTTGAG # Right flank : CCTATTAAAAATCAAATATGAACTACATTTACGTCTCTCACTATGCTTTTACCTCAAATTAAAGTTATAGTGGGGGCTTTTTTTATTTTTTTGAAATTACCCCCCACCGCTTCCTATTCCTCCTCCATGTTATAATAACTACAAATGCTCATAAAAACAGAAAGAAAGTAGGGGAAATGTATGGAAGCAATTATTGCACGACAACCGTTCCAATTAGGTGAAGGTCAAAAGTTTGAAAAAGTATCGCGTGAGGTACCAACACCCGGGGCACATGATATTTTAGTCAAGGTCCATGTGACTGGGGTGAATCCGGTTGATACGAAAATGCGTCAAGCGCCATTAAATGTTGATGCGCGTGTACTTGGCTTTGATGCGGCAGGTGTCGTTGAAGCAGTCGGTGATGCGGTTACGGATTTTAAAGCGGGTGACCGTGTGTACTATTCAGGTTCGAACCAACGAGATGGCTCCAATCAGACGTATCAGCTCGTGAATGAAAATTA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: F [matched GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 151288-152848 **** Predicted by CRISPRDetect 2.4 *** >NZ_MWUR01000001.1 Staphylococcus delphini strain 15S02591-1 NODE_1_length_286790_cov_76.9118_ID_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 151288 36 100.0 37 .................................... CTTCTTCACTTTCTAAAGATGTAATTCTGACATTATC 151361 36 100.0 35 .................................... TGTGCATTGTTTAAATCAGTTATTTCTTGTACTCC 151432 36 100.0 39 .................................... TATTTTGTTCCTGCAAAAAGTGTTTCAAATAATAGCTCA 151507 36 100.0 38 .................................... GCTTCATTCTCGAATTAATACGTTGCCAGTTCATGTTT 151581 36 100.0 36 .................................... CTCTAATGTGGTCAAATAAGATTAATACTTTCATTT 151653 36 100.0 36 .................................... CACATCTTCTAATTTATTTGATTTTGCATTTCCAAT 151725 36 100.0 37 .................................... ACCATAATGTTTTGATTACCGTTCGCAATCGAATTGT 151798 36 100.0 37 .................................... ATTTTTATCTAGTGGTTATAAGTTGGTATTAGGTAAG 151871 36 100.0 36 .................................... TATCAATTCCTTTTCATTTGTTTTATTTGTTATCTT 151943 36 100.0 35 .................................... CCTGTTTCGTTCGCAATAATTTTGAGGTTTCGACT 152014 36 100.0 36 .................................... TCATCAAAGTAATTAGCTAGCTCGGTGATAACTTCC 152086 36 100.0 37 .................................... ATCATTTTCATCAATTCCTTTTCTTTATTATAGTTTA 152159 36 100.0 37 .................................... ACGCAATTCGTCCATCACTTCTTCCGCCTGTGATTTT 152232 36 100.0 37 .................................... AATATTTAAATCCATGAAATGTACTACATAACGTGGG 152305 36 100.0 37 .................................... CTCGGTACTTTTTCAACCTAAAATGAATGCTGACGTT 152378 36 97.2 36 ............G....................... GATAATCCCGTTTTAATTTATCCTCGATATAATCGG A [152389] 152451 36 94.4 36 ............G........A.............. TGAAAACCTTTTATAACATCTGTCATTTCTTCCAAA A [152462] 152524 36 97.2 35 .....................A.............. ATTTATTACCGTCAATTTCTATTGCATATTTTTCT 152595 36 94.4 35 ..............T......A.............. GAGTGGCTTGATGAATTAGATGCATACCATTTTCA 152666 36 91.7 37 ............G.........A.........A... TTTTTCTTAATCTTCATCATCGTTCCTCCTTGTTTTT 152739 36 94.4 37 ......................A.........A... TTTCAGCATCATGAGAATATTCTTTTTCACTCGAATC 152812 36 69.4 0 .....T..T..A....G..T..A.....G.TTAT.. | T [152833] ========== ====== ====== ====== ==================================== ======================================= ================== 22 36 97.2 37 AATCGAATAGATACCCCGACATTAGGGGACGAGAAC # Left flank : ATATGAATGAAGTCGGATGTGTCGCGTACAGTAAAAAGATGGGAGTATGGTAGCTTTGGCAATTGAATAGGCTGCGGAAATATGTTAACTGTAAAAATACATTGCACATTCCGATGAGCTTTTTGAGTACGAAGAAGTTAAGAATAAAAAAATTGAAGTGTGCACAGCTACAGCATATTCGACCAGAAGTTAAAGATTAAAGAGAAGGTGGCAGTATACAAAGGAAAAGTGGGAAATATACGATAATTACCATGAACAAGAATTGGCTTAAATGAAAACGTTCAAAAAGTGTAGAAGAGGATAATCTTGTGGATACGGTATGAATTGGGAAAAATTTATTGTATAATATCGATGATGTGTTTTGAAAATTTTTTAGTTGGTTGAAACTGAAATGTCTAAAAATTGGACAATTAGGATATTTTTAATGTTAAAGTTGTCTTAATTTCAGACGCGGTTAAATGATAGATATTCACGCTATTAAGGGATTTCTATAGCTGACT # Right flank : CCATTTATAGTATTTATAAAGTGCTTTTAAGGAGAGGTTACGATATATGGAGCGTTGAAAAATGACATAACAACATAGAAAGATGAATGCAACGTTTTAAAAATTACAAATAATTCACAATTCTATTGTTGGAAACAAAGAAATGTTGTAAAATTTAATTAACATTTTAAGCGATAAAATGGAGTCTTATACATCTTGATGAATTTTTGTATTTATTGCATATTTTTTAGTCATAGCCATTTAAAGTATATGCATTAGTGGTTTTGATTGGAATTTTGAAGAAATAATAAGCAGATTAAAGGTGTTGAGATTGGATATACTACTATATTGATATAATGACTCACTGAATCGTATTCTTGCTTTTATCTAGGGGGTGTAAAGATGAAGGATATCATTTATGTTGAGAATCATCATTTTGTCAGTGTAAAAGGGGAAAGTATCAAGTTTAAAAATATTATAGATAAAACAGAGCGATATTTTTTATTAGATGATGTCGAAGC # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATCGAATAGATACCCCGACATTAGGGGACGAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-27] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //