Array 1 85900-84676 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJDZ01000003.1 Lactiplantibacillus plajomi strain NBRC 107333 scaffold3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 85899 36 100.0 30 .................................... TCACGCGTTTGCTTTGGCAACGTTGATAAT 85833 36 100.0 30 .................................... GACCATTAAACGGCTATGGTTGAATAGCTT 85767 36 100.0 30 .................................... GCTTTTCCCAGAACCAAGCATTAATTCTTC 85701 36 100.0 30 .................................... TGAAACAATTTCAAATGGTTTCCGATTTTC 85635 36 100.0 30 .................................... TTTGATTTATCAGTTTTTTCATCCATATCA 85569 36 100.0 30 .................................... AAAATTAAAGGGGACTGCGCAAAAAGAAGC 85503 36 100.0 30 .................................... TCTGTCTTTTTTATTTGCTAATAAAACAGC 85437 36 100.0 30 .................................... CAAAGGCAACGGTAGTGATACTAGTAATAG 85371 36 100.0 30 .................................... GAATGTGTATGGTGATTACCTGGAGTGGTC 85305 36 100.0 30 .................................... ATGATTCATTAATTCGTTCTTCTGCAATCT 85239 36 100.0 30 .................................... GATGGCAAAACTTGTTCGTAGACCCAATCT 85173 36 100.0 30 .................................... TAGTCCAGCGGTGGTCGTTGATATGCTTTC 85107 36 100.0 30 .................................... TTTAATGTTTTAGCGTCCATCTAACCCACC 85041 36 100.0 30 .................................... TTTCAACGCCTGTTGCAGGGGGCATAACCT 84975 36 100.0 30 .................................... TAACTGATACATCGTTATCACCACCAAACT 84909 36 100.0 30 .................................... CAAGGAGGGAAAAACGATGAGAAGTAACGA 84843 36 100.0 30 .................................... CAGTGAACTCGCTAAAACGTTTGGTGACCT 84777 36 100.0 30 .................................... AGTGAGCTGGTCTGATAATTGCGTAAGTTG 84711 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 19 36 100.0 30 GTTTTAGATAGAGGTCATTTTAAATAGGTCAAGAGT # Left flank : TCCGTGGATTTAAATAAGCTGTTCTTACGAAAGCTTCAGCGACGGATTATTGATATAATGGCAGAGGAACAGCGGATTGCGCTGATTGATCAGAGTCGAAACGTTGTTTCCAAAGTTTCGGATGTTAGCTTTTTAATGGATTTACCGTTGGAAGTTGGTGAATTACCGGATATTGAGCAAATTATCAAATTTGTAGGCATTAGTTTTCCGCCAGATTTAAAGGCCCATCCAGAAATGGTGTTAGAAACCCTGATTCAGACCCACGTTGAATTAGGATCACAAAAAGCGATTGTGTTGACGAATGTTAGTCATTACGTGACGTATCAGCAGTTACAAGAACTTACTCAATTGGTTCAAGAATTAAACGCCACTGTCATCCTCATCGAATATTCAGAAAGTGGTCGTAAGGATAAATTCGAGATGCCTTGCTATTACTACGTTGATGAAGATTTGGTAGATTGGCGGTCGTAAGATTATGAAAATGGCCTGTGGAAAAAGCG # Right flank : CCGCTGCTGTGCTTGTCCGCACAGGGGACAGCTTTAGATAGGTTGAACGTTAAACCTATCTATCTCTCCAATGTTTCACGTGAAACATTTCCATCCGAAAAAGCGACCCCAGCACACATCACGTGTACTGGGGTCGCTTTAATTAGTCACAAATTGTTACACAATCTTATCCGGGTTCAACAGGTTATTTGGATCCAAAGCTTGTTTGACCCGCTGCATGGTGTCAATTTCAGCAGCGTCACTGGTGGCTTGCAAGTACTGGCGCTTTGCGTAGCCAATACCGTGTTCACCGGAAACTTTCCCACCAAGTTCAATAGACTTGTTATAAAGGGCGGTGAAGACGGTCATTAGCTTCTTTTGCCAAACGTCGTCAGCGTAGTCGTCTTGGCAAACGTAGAGGTGTAGGTTGCCGTCCCCCACGTGACCAAAACCGGGGATGCGGACGTTTTCTTGCTTGGCGAGATCGTGGGTAAAGCTGACGAAGGCCGCGGTTTGGTCGC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATAGAGGTCATTTTAAATAGGTCAAGAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 8986-6578 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJDZ01000029.1 Lactiplantibacillus plajomi strain NBRC 107333 scaffold29, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 8985 28 100.0 33 ............................ TGTTCGTTTCCAGTGCCTACTACAAGGCATTAA 8924 28 100.0 33 ............................ TAAGATGGTGAAATTGCAGGTTTACTATCGGTT 8863 28 100.0 33 ............................ TACTGTGTTAACAACAGCAACAATGGCTGACCA 8802 28 100.0 33 ............................ TTTGAAACCCATTATCACGTACGAGCTTTGTAA 8741 28 100.0 33 ............................ TCAATACGACTGCTCATCGAACGTTCAACAACT 8680 28 100.0 33 ............................ TACTCTTGAGAAAGCGCGGCTCAACCGTGACCG 8619 28 100.0 33 ............................ CTACTACACCGCTGGTCAAAAATCAACGGTCAA 8558 28 100.0 33 ............................ TTTACGAATATGAAACAAAACGAGGGAAAAAAT 8497 28 100.0 33 ............................ TTAATAATGCGATATTCAGGTGGTTTCACATTT 8436 28 100.0 33 ............................ TTACAATGAGAATGGTGCTATGCGAGCTTATCA 8375 28 100.0 33 ............................ TACATCGTTTAAGAATTTGTCTGCTTCATTGTT 8314 28 100.0 33 ............................ CGCCACCGGGAACATATAATATCAAAACGTTTT 8253 28 100.0 33 ............................ TTGTCCGATGCCACAACCTTGAACACCAGCGGA 8192 28 100.0 33 ............................ TAATATTGCTGGTAGCACAAATCCTTTAGTTAG 8131 28 100.0 33 ............................ TAAAGAAAAAACCTTGTTCGGCAAGAGCTTGGA 8070 28 100.0 33 ............................ TATATTCATCATTATAGTTTTTCATTAATTTTT 8009 28 100.0 33 ............................ TGAATAATAAGGAACCATTCTCAAGTAATCAGG 7948 28 100.0 33 ............................ CTTGTATGACAATAACTATGGAGAAGATGTTAT 7887 28 100.0 33 ............................ CGAACCCGGCTATCATTGCCGCAAAGCCAACGC 7826 28 100.0 33 ............................ TGAGGAGGCTACAGCATGATTGATCATACTGAA 7765 28 100.0 33 ............................ TATAGCTACCGATATGCTTACCGGCGGTCTTTT 7704 28 100.0 33 ............................ TGCGGATAAGGCCAACGACTACACCCGATACAA 7643 28 100.0 33 ............................ TTAAGTGACAAGGAAGTGAACCACTTGTGGTTG 7582 28 100.0 33 ............................ TGTTGTACAGTAACATCACTAGTAACGGTAAGC 7521 28 100.0 33 ............................ TATATTCTAGTGCGTCAAAGTATTCAAAATTTC 7460 28 100.0 34 ............................ CATGGCCTTGCTATACCCAAAATCCTGCGCTTTA 7398 28 100.0 33 ............................ CTGGACGGCGAATGTTACTTTCACTGGTTGGTC 7337 28 100.0 33 ............................ TAAACAGTATCATGTTTGTCGGTTACGATGTAA 7276 28 100.0 33 ............................ CCGGTTCCCGATGTTCGGTGAAGCTTTGCAGAA 7215 28 100.0 33 ............................ TTGAATAACCAAACACGCAATGTTAAATATAAC 7154 28 100.0 33 ............................ TATACGTGCCTGAGTTTGGGTCATCCTCAAAGT 7093 28 100.0 33 ............................ TATAAAAAAATAAAATATATATATAAAGAAAAG 7032 28 100.0 33 ............................ TAATGGCGTACAGGTTAACGTTACTTTCCCAAA 6971 28 100.0 33 ............................ TCACTCACTTTCTCGAGGGCCACTTTGTCCCAA 6910 28 100.0 33 ............................ TGATGCTCAACAAAGCAACTATGTAAGCAATGA 6849 28 100.0 33 ............................ TTTAACTGCACCAGTGTCTAGGTTCATATCGAG 6788 28 100.0 33 ............................ TAAACATTGCCGCTAATCAAGAACACTGAATTA 6727 28 100.0 33 ............................ CACAAGACACTTTAACAAACATGCTACAAGGAG 6666 28 100.0 33 ............................ TACGTTATTCTGCTCTTCAAATTTTGCGAATTT 6605 27 89.3 0 ...................A..A-.... | A [6580] ========== ====== ====== ====== ============================ ================================== ================== 40 28 99.7 33 GTATTCCCCGCGTATGCGGGGGTGATCC # Left flank : GTAAAAAACGAAATTATTGCCATTGGCGCGGTTAAGCGGACTGAGGATGGTACCCTTGAAGAATTTAACCAATTCGTCAAAAATTTAAGGCCAATACCACGTCCGATTACGGCATTAACTGGGATAACGTCGCGCCAGTTAAATGAAGCGGGGCTGCCACTAAAAATGGCACTTGAACGTTTTCACGACTTTATCGGCGATTTACCCATCCTTGGGTACAACTTACGTTTTGACGAAAGCTTTTTAACGGCCGCTTTGCGTAAGACCCGGTTGCCAGAACTGACTAATCCGATGCACGATTTGATGCCAGTGGTTAAAGAGGCTAATATGTTCCTTGATAATTATCAGTTAGAAACAGTTTTAAACGATTATGGCATTAAAAATGACCAGCCGCATAACGCACTTTCAGATGCCAAAGCAACTTGGGCGTTGGCCGAGCAGTTAATAAAAAACGGCGATTTCGAAATTTAGAAACGTTGATTTAACGGGATTTTTTTAGT # Right flank : AGTCGCTGTTTATATTCATTTTCAGCATCACTACAGCTCAAAAATACCGGACCTCTTAAAAAAGAAGTACGGTGTTTTGTGGTACAGCATGATGCAAAAATGAAGCCATCAAGCCGAAATCCATGTCGAATATAATATTTTCAATTAAAATATATTGAAGGAGGCGAAAGTGAATGACCTTTTATACGTATAATTACCTTACAAATCGAAACGAAACGTGGCAGTATGCTCGTTTAATTATCATATTAATTTTATTAGCAATTTTTACTGGATTATTCGTGTACTATTTACGGCACCGCTGGAACGTTAAATATAAGGATTTGAGTGTGATCACTGGGGTGGTAATCCTCCTTTTCTTGGGATTTCAAATTAACGGTATGATGTCGCTGAAAGCTAGTAACGTTCAGGCTAATGCGATAACAACGACGATAAAAGAAGTTGGAAAACGGTTAGATGTTAAGCCAACCACGATTAGTGTCAACGGCACGACGACCTCGAAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCGCGTATGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGTAGGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 12291-13356 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJDZ01000034.1 Lactiplantibacillus plajomi strain NBRC 107333 scaffold34, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 12291 28 100.0 33 ............................ TAAATGCTTTGGTCAAGTTCTCGATTAACTCTT 12352 28 100.0 33 ............................ TAATAATCGATTAGGGCTATCAGAAAAACGTTT 12413 28 100.0 33 ............................ CATTTGGCTTGAAGCCAAGTTACTGAAAGCAGA 12474 28 100.0 33 ............................ TAAAGGGGTACTAAGCGAGTGACGGGAATCGGA 12535 28 100.0 33 ............................ TACCTTGCTTACTCAAATCGGAGAACAGCGTTG 12596 28 100.0 33 ............................ TGAATATGGAAGGCAACGAGGCTATTGAGAATG 12657 28 100.0 33 ............................ TTAATCATAGCGTTATCAATATCAATCAGGGCC 12718 28 100.0 33 ............................ TATTAATAAAATTACATCTTTGAGAATACCCAA 12779 28 100.0 33 ............................ TTATACTTTGACGCCTATAAAAAATTTGAAAAT 12840 28 100.0 33 ............................ TTTGGACAACCTGACGCCGGCCGCGGTGATGAA 12901 28 100.0 33 ............................ TAATCAGTCGAACACTCCCTTTGAAAATAATGG 12962 28 100.0 33 ............................ TGATTGAATCATGCCTAGATTAATCAGCGCATA 13023 28 100.0 33 ............................ TAGTATCAACAAAGGGACTTTGACTAAATTAGC 13084 28 100.0 33 ............................ TATCTATCAAACGGATTCAGCTTATCCGACGCG 13145 28 100.0 33 ............................ TAGTACGCAAACTCATTTTTTATACAATCCAAT 13206 28 100.0 33 ............................ CAAACAAATCAATCTCACTTAGCGGTCAGTCGA 13267 28 100.0 33 ............................ CATATTCAATTGAAAAATGCCCTTTGACCGGGA 13328 28 85.7 0 .....................C...AAA | A [13351] ========== ====== ====== ====== ============================ ================================= ================== 18 28 99.2 33 GTATTCCCCGCGTATGCGGGGGTGATCC # Left flank : TCACTGTTTATAAAAACGTTTGATAGCGTTCACTTTTATGGGATATCTTAGTTAGTAGGATGGGTACTTTTTAAAGAATTGGACGGTGGCCTGATTGATATTAAATGAGAAAATAATGTGATTTTATTGTTTCCTAAATTGGATGTTGAGTTAGAAGTTGTTGGGTGGTTTGCCAGACTGATAATGAATCAATAGTGGAAGATGATCATGTGAAGCAGCTCGGTTTCTGATGTACCGGAGGTTCTTGCCGTAACCAAATGGCTGAAGTGGGGATTGATATTTCAGATCAGCAATTTAAGTTGATTGGTACAACTTATTTGAATCACTGCCATTTAGTCGTTTTTCGCGAGGTACGCGACCAGATTGCGGAAATTAAAAAATTGAACGTTTGAAGTGGTAGTTTTGGGGAGATTTGGTATGATGAACATGGGTCGTGGCGAGTTAATTAAAAACGGCACTTTTAAAATTTAGAAACGCCGGTTTAACGGGATTTTTTTAGT # Right flank : ACAGCATTAAGTTTCAACTAAGTGTGAACTCTCCCGTCAATAAAGTAACGGGCTTCGGCGTAAAAACCTACAACTAAACAGGTTCTATCCGAAAACGTTTAGGCAATGCACCCTCGCGGGTGGGCGTCAGTTAAGAAGCTCAAACAACGTGTCGTGCCCGTTTTCACTAGGTCAGGGCAATACGCACCACGTTTATTCTTATAGCCATTAAGGGCGACAAGGTTCTGTCTCGCCCGTAAATTTTAATTGATAGTTACTAGACTGCTTGCGTTTAGGTGTGGGTAGTCTCTTAGTTTGATGTGATGTTCAGGGTTCAAACCCCAATCTAGGATATTCCAACTTGCATTAAGGTCACGGTTAATCAGCTTGCCTGTAAGGGTTGAAACCCACTCACGGACTGATGTATCATGCTTTTCTTCGTGGGTTGTACCGTACTCAACTTGTGATGTCTTGTAGGCGTCAACCTTAATTAGCGTCTTACCAGTACGATTTGCCAGCAT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCGCGTATGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTAGGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 21765-23136 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJDZ01000034.1 Lactiplantibacillus plajomi strain NBRC 107333 scaffold34, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================== ================== 21765 28 96.4 33 ....................A....... CAACATGCAAGCAATTAAAAATCACAAACGTGA 21826 28 96.4 35 ....................A....... TATGATGATGGCGAGAATGCTAGCTATGACGAGTG 21889 28 96.4 33 ....................A....... TCACCAGCTTTAGCGTTCGTTCTGCCTAAGGCT 21950 28 100.0 33 ............................ TAACTGGTATACTAATACGTCATCAACACCACG 22011 28 100.0 33 ............................ TATCTGGCGCATCGACTTTCCCTTTGGAATTTC 22072 28 100.0 33 ............................ TTAAAAAGGTGGTAGGAGGTGTCTAAGCCTTGG 22133 28 100.0 33 ............................ TTAACACCAGTGTATGACATTCCTGGGCGATTC 22194 28 100.0 33 ............................ TGTGGTTGAGTTATTGAAAAAGCGCGGAAAAAT 22255 28 100.0 33 ............................ TGGTTGATAGATCATGAACATTTGGCACCATTC 22316 28 100.0 33 ............................ TGGTAAGTAAATCAATCTGTTTCCGATAACTAT 22377 28 100.0 33 ............................ TAACGTTTTGATTAATTGTTCTAGTAAACAGGT 22438 28 100.0 33 ............................ TCCGCTTGCTGATAACCTTGCCGTTCAACGGCT 22499 28 100.0 33 ............................ TATGTCGATATACGTTTTAGCACGTGAATGCTG 22560 28 100.0 33 ............................ TAAAAAGCGTCACCAAGATTGGCAACGCTCTAA 22621 28 100.0 33 ............................ TAAACAATTTTTGTGCCATTGCATAACTTACAC 22682 28 100.0 33 ............................ CAAAGCCGCGGTTATCGCTGGAGGCACTTCTAA 22743 28 100.0 33 ............................ CTTGCGGACTTGGTAGACCCAGAAGTCCTCGCA 22804 28 100.0 33 ............................ TATACCGAGGCTCATATTTTTTATTTATTAGTA 22865 28 100.0 33 ............................ TGAAATAAGCGCCTTTTGGATTACTGTAAAATT 22926 28 100.0 33 ............................ CAGTGTTAAATCCGATTTTAACAGTGTTTTTTA 22987 28 100.0 33 ............................ TTCCGGTTGTTCCATTCGTTACAGACCTCGATT 23048 28 100.0 33 ............................ TATCACTGGTAGTCCCTACGCCAGCACTAGACA 23109 28 82.1 0 .....................T.T.AAG | ========== ====== ====== ====== ============================ =================================== ================== 23 28 98.8 33 GTATTCCCCGCGTATGCGGGGGTGATCC # Left flank : GTACCGGAAATTCTTGCCGTAGCCAGATGGCGGAAGGGTTTGCGAACCACTTGCTGGGTCCGGATTGGCAAGTTGCAAGTGCGGGTATTGAAACGCACGGTTTAAACCCGCTGGCCGTTCAAGTAATGGCTGAAGTGGGGATTGATATTTCGAATCAGCAATCTAAGTTGATTGATGCGGATTATTTAAAGCACTGCGATTTAGTCGTGACGCTGTGCGGCGATGCCCGTGATCATTGTCCGGTCACACCGCCGACGGTTCAAAAGCAACACTGGCCGTTAAATGATCCGGCACAGGCGACCGGAACCGAAGCCGAACGCTTAGCCGTTTTCCGCGAGGTGCGCGATCAGATTGAGGAACGGGTGCGGAACTTAAAAAAGTTGAACGTTTGAAGTGGCAGGTTTGGAAAGATTTGATATGATAAACATGGGGCGTGGCAAGTTAATAAAAAACGGCACTTTTGAAATTTAGAAACGCCGGTTTAACGGGATTTTTTTAGT # Right flank : GAACAGTATGAGGTTTCGAATTAGGTACAAAAAAGGTGCTGTACTCCCAAAAAATCCGGGGTGTAGCACCTTTCATTACTATTCAGTCAACATTTCCTTCGCAAACTTTTTGACGAGTTCGATTTGTTCTGGCTTTAATTTACCGCCGCGGCTGCCGATGATTTTCATGCCTTTTCCCCCCATAACTTGGTGGAAGTGGCCGACAATCGGGATGCCTTTCTTCTCGGCAATCTTGGTCAGTGCTTTGTCCGAAACCATTTCTGGCCCGCCAGAGGTCGTGAAGAGGGCGATTTTTTTAATTTTTTCGGGATCTAATGATTTCATGAAATCGGATGCGGATGAATCGGGGCGCATGAAGTAGGTGCCGCCCCCGAAAAAGAGTAGGTCTGCTTCGGTAACCGGCGTGTCGACGGATTCGGCTGGGACGTCGGCTACTTCGGCAATCTGGTTTGCGAAAGCCTGGGTGTTACCGTTGCGAGTTTGATAACGAATAGCCACTG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCGCGTATGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTAGGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //